RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeastyeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFK1YGR240C GCN2P15442 1659 aa5.58□□□□□ -1.52
PFK1YGR240C DEF1P35732 738 aaKnown RBP5.57□□□□□ -1.52
PFK1YGR240C ISW1P38144 1129 aa5.57□□□□□ -1.52
PFK1YGR240C CHC1P22137 1653 aaKnown RBP5.57□□□□□ -1.52
PFK1YGR240C NUP157P40064 1391 aaKnown RBP5.57□□□□□ -1.52
PFK1YGR240C SRB8P25648 1427 aa5.56□□□□□ -1.52
PFK1YGR240C TRM3Q07527 1436 aa5.56□□□□□ -1.52
PFK1YGR240C YSP2Q06681 1438 aa5.56□□□□□ -1.52
PFK1YGR240C MAM3Q12296 706 aa5.55□□□□□ -1.52
PFK1YGR240C RPS0AP32905 252 aaKnown RBP5.55□□□□□ -1.52
PFK1YGR240C RTT106P40161 455 aa5.55□□□□□ -1.52
PFK1YGR240C BNI1P41832 1953 aa5.54□□□□□ -1.52
PFK1YGR240C KIN1P13185 1064 aa5.54□□□□□ -1.52
PFK1YGR240C SLD2P34252 453 aa5.54□□□□□ -1.52
PFK1YGR240C NHA1Q99271 985 aa5.54□□□□□ -1.52
PFK1YGR240C PDR5P33302 1511 aaKnown RBP5.54□□□□□ -1.52
PFK1YGR240C MMS1Q06211 1407 aa5.54□□□□□ -1.52
PFK1YGR240C TY4A-JP47023 414 aa5.53□□□□□ -1.52
PFK1YGR240C MPP10P47083 593 aaKnown RBP5.53□□□□□ -1.52
PFK1YGR240C SUB2Q07478 446 aaKnown RBP5.53□□□□□ -1.52
PFK1YGR240C OCA5P38738 679 aa5.53□□□□□ -1.52
PFK1YGR240C RPT2P40327 437 aaKnown RBP5.53□□□□□ -1.52
PFK1YGR240C YAF9P53930 226 aa5.52□□□□□ -1.53
PFK1YGR240C BRE1Q07457 700 aaKnown RBP5.52□□□□□ -1.53
PFK1YGR240C AIM21P40563 679 aa5.52□□□□□ -1.53
PFK1YGR240C SEC7P11075 2009 aaKnown RBP5.52□□□□□ -1.53
PFK1YGR240C RRN6P32786 894 aa5.52□□□□□ -1.53
PFK1YGR240C UBX5Q06682 500 aa5.52□□□□□ -1.53
PFK1YGR240C YOR093CQ12275 1648 aa5.51□□□□□ -1.53
PFK1YGR240C SPT16P32558 1035 aaKnown RBP5.51□□□□□ -1.53
PFK1YGR240C SSA2P10592 639 aaKnown RBP5.5□□□□□ -1.53
PFK1YGR240C TOM20P35180 183 aa5.49□□□□□ -1.53
PFK1YGR240C GAL11P19659 1081 aa5.49□□□□□ -1.53
PFK1YGR240C FPR4Q06205 392 aaPredicted RBP5.48□□□□□ -1.53
PFK1YGR240C RAD2P07276 1031 aa5.47□□□□□ -1.53
PFK1YGR240C NMD2P38798 1089 aaKnown RBP5.47□□□□□ -1.53
PFK1YGR240C FPR3P38911 411 aaKnown RBP5.47□□□□□ -1.53
PFK1YGR240C ALD4P46367 519 aaKnown RBP5.47□□□□□ -1.53
PFK1YGR240C NUP188P52593 1655 aaKnown RBP5.46□□□□□ -1.53
PFK1YGR240C DNF2Q12675 1612 aa5.46□□□□□ -1.54
PFK1YGR240C TIF4632P39936 914 aaKnown RBP5.46□□□□□ -1.54
PFK1YGR240C TLG1Q03322 224 aa5.46□□□□□ -1.54
PFK1YGR240C GIR2Q03768 265 aaPredicted RBP5.46□□□□□ -1.54
PFK1YGR240C DRS2P39524 1355 aa5.46□□□□□ -1.54
PFK1YGR240C VMR1P38735 1592 aa5.45□□□□□ -1.54
PFK1YGR240C HEM3P28789 327 aa5.45□□□□□ -1.54
PFK1YGR240C DAL5P15365 543 aa5.45□□□□□ -1.54
PFK1YGR240C PMC1P38929 1173 aaPredicted RBP5.45□□□□□ -1.54
PFK1YGR240C HAP1P0CE41 1502 aa5.45□□□□□ -1.54
PFK1YGR240C YMR196WQ04336 1088 aa5.44□□□□□ -1.54
PFK1YGR240C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PFK1YGR240C TAF13P11747 167 aa5.43□□□□□ -1.54
PFK1YGR240C RPA135P22138 1203 aaKnown RBP5.43□□□□□ -1.54
PFK1YGR240C YNR021WP53723 404 aaKnown RBP5.43□□□□□ -1.54
PFK1YGR240C BNR1P40450 1375 aa5.43□□□□□ -1.54
PFK1YGR240C MPE1P35728 441 aaKnown RBP5.43□□□□□ -1.54
PFK1YGR240C HOS4P40480 1083 aa5.43□□□□□ -1.54
PFK1YGR240C KEX1P09620 729 aa5.42□□□□□ -1.54
PFK1YGR240C GUA1P38625 525 aaKnown RBP5.42□□□□□ -1.54
PFK1YGR240C CST6P40535 587 aa5.42□□□□□ -1.54
PFK1YGR240C YDL121CQ07541 149 aa5.41□□□□□ -1.54
PFK1YGR240C TPM2P40414 161 aa5.41□□□□□ -1.54
PFK1YGR240C ERP2P39704 215 aa5.4□□□□□ -1.54
PFK1YGR240C SEN54Q02825 467 aaPredicted RBP5.4□□□□□ -1.54
PFK1YGR240C RIM101P33400 625 aa5.4□□□□□ -1.54
PFK1YGR240C PLP2Q12017 286 aa5.4□□□□□ -1.54
PFK1YGR240C DSF2P38213 736 aa5.4□□□□□ -1.55
PFK1YGR240C BOI2P39969 1040 aa5.4□□□□□ -1.55
PFK1YGR240C VPS70P47161 811 aa5.4□□□□□ -1.55
PFK1YGR240C VMA4P22203 233 aaKnown RBP5.39□□□□□ -1.55
PFK1YGR240C IML1P47170 1584 aa5.39□□□□□ -1.55
PFK1YGR240C TMA64Q04600 565 aaKnown RBP5.39□□□□□ -1.55
PFK1YGR240C AIM7Q12156 149 aa5.39□□□□□ -1.55
PFK1YGR240C MFT1P33441 392 aaKnown RBP5.39□□□□□ -1.55
PFK1YGR240C NOC2P39744 710 aaKnown RBP5.39□□□□□ -1.55
PFK1YGR240C NNF1P47149 201 aa5.39□□□□□ -1.55
PFK1YGR240C MEH1Q02205 184 aa5.39□□□□□ -1.55
PFK1YGR240C TSR4P25040 408 aa5.38□□□□□ -1.55
PFK1YGR240C SEC20P28791 383 aa5.38□□□□□ -1.55
PFK1YGR240C POL5P39985 1022 aaKnown RBP5.38□□□□□ -1.55
PFK1YGR240C RNH70P53331 553 aa5.38□□□□□ -1.55
PFK1YGR240C ITT1Q04638 464 aa5.38□□□□□ -1.55
PFK1YGR240C HSP82P02829 709 aaKnown RBP5.38□□□□□ -1.55
PFK1YGR240C VPS27P40343 622 aaKnown RBP5.38□□□□□ -1.55
PFK1YGR240C YPR148CQ06523 435 aa5.37□□□□□ -1.55
PFK1YGR240C PSK2Q08217 1101 aa5.37□□□□□ -1.55
PFK1YGR240C GLC3P32775 704 aa5.37□□□□□ -1.55
PFK1YGR240C RRP14P36080 434 aaKnown RBP5.37□□□□□ -1.55
PFK1YGR240C SSA4P22202 642 aaKnown RBP5.36□□□□□ -1.55
PFK1YGR240C ENV11P53246 860 aa5.36□□□□□ -1.55
PFK1YGR240C YOL057WQ08225 711 aa5.36□□□□□ -1.55
PFK1YGR240C NUP192P47054 1683 aa5.35□□□□□ -1.55
PFK1YGR240C TY3B-IQ7LHG5 1498 aaKnown RBP5.35□□□□□ -1.55
PFK1YGR240C PDR11P40550 1411 aa5.35□□□□□ -1.55
PFK1YGR240C RAV1P47104 1357 aa5.35□□□□□ -1.55
PFK1YGR240C NOP2P40991 618 aaKnown RBP5.35□□□□□ -1.55
PFK1YGR240C IES1P43579 692 aa5.35□□□□□ -1.55
PFK1YGR240C HPC2Q01448 625 aa5.35□□□□□ -1.55
PFK1YGR240C ECM16Q04217 1267 aaKnown RBP5.35□□□□□ -1.55
PFK1YGR240C MGA2P40578 1113 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms