RNA–Protein interactions for RNA: YGR056W

RSC1, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC1, Length 2,787 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC1	YGR056W	RAM2	P29703	316 aa		4.87	□□□□□ -1.63
RSC1	YGR056W	MAP2	P38174	421 aa	Known RBP	4.85	□□□□□ -1.63
RSC1	YGR056W	USO1	P25386	1790 aa		4.85	□□□□□ -1.63
RSC1	YGR056W	HAP1	P0CE41	1502 aa		4.85	□□□□□ -1.63
RSC1	YGR056W	IPL1	P38991	367 aa		4.84	□□□□□ -1.63
RSC1	YGR056W	PAF1	P38351	445 aa		4.83	□□□□□ -1.64
RSC1	YGR056W	RCR1	P38212	213 aa		4.82	□□□□□ -1.64
RSC1	YGR056W	SET1	P38827	1080 aa	Known RBP	4.82	□□□□□ -1.64
RSC1	YGR056W	TYS1	P36421	394 aa	Known RBP	4.82	□□□□□ -1.64
RSC1	YGR056W	NOP7	P53261	605 aa	Known RBP	4.82	□□□□□ -1.64
RSC1	YGR056W	PDR11	P40550	1411 aa		4.82	□□□□□ -1.64
RSC1	YGR056W	SPB4	P25808	606 aa	Predicted RBP	4.81	□□□□□ -1.64
RSC1	YGR056W	VPS70	P47161	811 aa		4.81	□□□□□ -1.64
RSC1	YGR056W	MAK10	Q02197	733 aa		4.81	□□□□□ -1.64
RSC1	YGR056W	YPR148C	Q06523	435 aa		4.81	□□□□□ -1.64
RSC1	YGR056W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.81	□□□□□ -1.64
RSC1	YGR056W	RAV1	P47104	1357 aa		4.8	□□□□□ -1.64
RSC1	YGR056W	BCH2	P36122	765 aa		4.8	□□□□□ -1.64
RSC1	YGR056W	NUP192	P47054	1683 aa		4.79	□□□□□ -1.64
RSC1	YGR056W	RTC1	Q08281	1341 aa		4.77	□□□□□ -1.65
RSC1	YGR056W	YFR006W	P43590	535 aa		4.76	□□□□□ -1.65
RSC1	YGR056W	BCK1	Q01389	1478 aa		4.76	□□□□□ -1.65
RSC1	YGR056W	MRM1	P25270	412 aa		4.76	□□□□□ -1.65
RSC1	YGR056W	RLF2	Q12495	606 aa		4.76	□□□□□ -1.65
RSC1	YGR056W	BBC1	P47068	1157 aa		4.75	□□□□□ -1.65
RSC1	YGR056W	SCY1	P53009	804 aa		4.74	□□□□□ -1.65
RSC1	YGR056W	KRE5	P22023	1365 aa		4.73	□□□□□ -1.65
RSC1	YGR056W	DSF2	P38213	736 aa		4.73	□□□□□ -1.65
RSC1	YGR056W	EPS1	P40557	701 aa		4.73	□□□□□ -1.65
RSC1	YGR056W	MRX12	P47084	519 aa		4.73	□□□□□ -1.65
RSC1	YGR056W	RAD9	P14737	1309 aa		4.72	□□□□□ -1.65
RSC1	YGR056W	TAF5	P38129	798 aa		4.71	□□□□□ -1.66
RSC1	YGR056W	RIA1	P53893	1110 aa		4.71	□□□□□ -1.66
RSC1	YGR056W	CFT1	Q06632	1357 aa	Known RBP	4.71	□□□□□ -1.66
RSC1	YGR056W	ESL2	P36168	1195 aa		4.7	□□□□□ -1.66
RSC1	YGR056W	YMR196W	Q04336	1088 aa		4.7	□□□□□ -1.66
RSC1	YGR056W	PBS2	P08018	668 aa		4.7	□□□□□ -1.66
RSC1	YGR056W	CAB1	Q04430	367 aa		4.7	□□□□□ -1.66
RSC1	YGR056W	KIN1	P13185	1064 aa		4.7	□□□□□ -1.66
RSC1	YGR056W	MAK11	P20484	414 aa	Known RBP	4.7	□□□□□ -1.66
RSC1	YGR056W	ALD4	P46367	519 aa	Known RBP	4.7	□□□□□ -1.66
RSC1	YGR056W	BDF1	P35817	686 aa		4.69	□□□□□ -1.66
RSC1	YGR056W	NAP1	P25293	417 aa	Known RBP	4.69	□□□□□ -1.66
RSC1	YGR056W	SLX5	P32828	619 aa	Known RBP	4.69	□□□□□ -1.66
RSC1	YGR056W	THI12	P42883	340 aa		4.69	□□□□□ -1.66
RSC1	YGR056W	THI5	P43534	340 aa		4.69	□□□□□ -1.66
RSC1	YGR056W	THI11	P47183	340 aa		4.69	□□□□□ -1.66
RSC1	YGR056W	THI13	Q07748	340 aa		4.69	□□□□□ -1.66
RSC1	YGR056W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.69	□□□□□ -1.66
RSC1	YGR056W	GLC3	P32775	704 aa		4.67	□□□□□ -1.66
RSC1	YGR056W	RTG3	P38165	486 aa		4.67	□□□□□ -1.66
RSC1	YGR056W	TAF8	Q03750	510 aa		4.67	□□□□□ -1.66
RSC1	YGR056W	YNR021W	P53723	404 aa	Known RBP	4.66	□□□□□ -1.66
RSC1	YGR056W	YNR029C	P53729	429 aa	Known RBP	4.66	□□□□□ -1.66
RSC1	YGR056W	TGL3	P40308	642 aa		4.66	□□□□□ -1.66
RSC1	YGR056W	KIP3	P53086	805 aa	Known RBP	4.66	□□□□□ -1.66
RSC1	YGR056W	YLR419W	Q06698	1435 aa	Known RBP	4.66	□□□□□ -1.66
RSC1	YGR056W	ORC1	P54784	914 aa	Predicted RBP	4.65	□□□□□ -1.67
RSC1	YGR056W	COQ8	P27697	501 aa		4.65	□□□□□ -1.67
RSC1	YGR056W	TIF4632	P39936	914 aa	Known RBP	4.64	□□□□□ -1.67
RSC1	YGR056W	POL5	P39985	1022 aa	Known RBP	4.64	□□□□□ -1.67
RSC1	YGR056W	TY4B-H	P0C2J7	1802 aa		4.64	□□□□□ -1.67
RSC1	YGR056W	TY4B-J	P47024	1803 aa		4.64	□□□□□ -1.67
RSC1	YGR056W	SPE2	P21182	396 aa		4.64	□□□□□ -1.67
RSC1	YGR056W	DIT2	P21595	489 aa		4.64	□□□□□ -1.67
RSC1	YGR056W	VPS29	P38759	282 aa		4.64	□□□□□ -1.67
RSC1	YGR056W	IES2	P40154	320 aa		4.63	□□□□□ -1.67
RSC1	YGR056W	NUP42	P49686	430 aa	Known RBP	4.63	□□□□□ -1.67
RSC1	YGR056W	MLP1	Q02455	1875 aa	Known RBP	4.63	□□□□□ -1.67
RSC1	YGR056W	BUD31	P25337	157 aa	Predicted RBP	4.63	□□□□□ -1.67
RSC1	YGR056W	SCT1	P32784	759 aa		4.63	□□□□□ -1.67
RSC1	YGR056W	GUA1	P38625	525 aa	Known RBP	4.62	□□□□□ -1.67
RSC1	YGR056W	MAM3	Q12296	706 aa		4.62	□□□□□ -1.67
RSC1	YGR056W	RCM1	P53972	490 aa		4.62	□□□□□ -1.67
RSC1	YGR056W	AIM7	Q12156	149 aa		4.61	□□□□□ -1.67
RSC1	YGR056W	RRP5	Q05022	1729 aa	Known RBP	4.6	□□□□□ -1.67
RSC1	YGR056W	EDS1	P38073	919 aa		4.6	□□□□□ -1.67
RSC1	YGR056W	YRF1-2	P40105	1681 aa		4.6	□□□□□ -1.67
RSC1	YGR056W	CPS1	P27614	576 aa		4.6	□□□□□ -1.67
RSC1	YGR056W	PSK1	P31374	1356 aa		4.6	□□□□□ -1.67
RSC1	YGR056W	MHP1	P43638	1398 aa		4.6	□□□□□ -1.67
RSC1	YGR056W	PPH3	P32345	308 aa		4.59	□□□□□ -1.68
RSC1	YGR056W	CHZ1	P40019	153 aa	Predicted RBP	4.59	□□□□□ -1.68
RSC1	YGR056W	STS1	P38637	319 aa		4.58	□□□□□ -1.68
RSC1	YGR056W	REF2	P42073	533 aa	Predicted RBP	4.58	□□□□□ -1.68
RSC1	YGR056W	ADE6	P38972	1358 aa	Known RBP	4.55	□□□□□ -1.68
RSC1	YGR056W	YML133C	Q03099	1374 aa		4.55	□□□□□ -1.68
RSC1	YGR056W	YLL067C	Q07888	1374 aa		4.55	□□□□□ -1.68
RSC1	YGR056W	YLL066C	Q99208	1374 aa		4.55	□□□□□ -1.68
RSC1	YGR056W	YIL177C	P40434	1758 aa		4.54	□□□□□ -1.68
RSC1	YGR056W	YJL225C	P40889	1758 aa		4.54	□□□□□ -1.68
RSC1	YGR056W	FKS3	Q04952	1785 aa		4.54	□□□□□ -1.68
RSC1	YGR056W	LEU2	P04173	364 aa	Predicted RBP	4.54	□□□□□ -1.68
RSC1	YGR056W	MTR4	P47047	1073 aa	Known RBP	4.54	□□□□□ -1.68
RSC1	YGR056W	PDS5	Q04264	1277 aa		4.54	□□□□□ -1.68
RSC1	YGR056W	TFB3	Q03290	321 aa		4.53	□□□□□ -1.68
RSC1	YGR056W	COX6	P00427	148 aa		4.53	□□□□□ -1.68
RSC1	YGR056W	NOP53	Q12080	455 aa	Known RBP	4.53	□□□□□ -1.68
RSC1	YGR056W	PRP45	P28004	379 aa	Predicted RBP	4.53	□□□□□ -1.68
RSC1	YGR056W	CSE4	P36012	229 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms