RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W SPP1Q03012 353 aa10.09□□□□□ -0.79
MSP1YGR028W SAS10Q12136 610 aaPredicted RBP10.09□□□□□ -0.79
MSP1YGR028W TIF11P38912 153 aaKnown RBP10.08□□□□□ -0.8
MSP1YGR028W SET4P42948 560 aa10.07□□□□□ -0.8
MSP1YGR028W ULS1Q08562 1619 aa10.07□□□□□ -0.8
MSP1YGR028W SPO14P36126 1683 aa10.06□□□□□ -0.8
MSP1YGR028W GUT1P32190 709 aa10.06□□□□□ -0.8
MSP1YGR028W ATH1P48016 1211 aa10.06□□□□□ -0.8
MSP1YGR028W YPR148CQ06523 435 aa10.05□□□□□ -0.8
MSP1YGR028W IRC20Q06554 1556 aa10.05□□□□□ -0.8
MSP1YGR028W NUP157P40064 1391 aaKnown RBP10.03□□□□□ -0.8
MSP1YGR028W DNF2Q12675 1612 aa10.03□□□□□ -0.8
MSP1YGR028W PDR12Q02785 1511 aa10.02□□□□□ -0.8
MSP1YGR028W ULI1P43604 169 aa10.01□□□□□ -0.81
MSP1YGR028W HTA1P04911 132 aaKnown RBP10□□□□□ -0.81
MSP1YGR028W HTA2P04912 132 aa10□□□□□ -0.81
MSP1YGR028W IQG1Q12280 1495 aa9.99□□□□□ -0.81
MSP1YGR028W PDR15Q04182 1529 aaKnown RBP9.99□□□□□ -0.81
MSP1YGR028W GDB1Q06625 1536 aa9.99□□□□□ -0.81
MSP1YGR028W DCW1P36091 449 aa9.97□□□□□ -0.81
MSP1YGR028W DOP1Q03921 1698 aa9.96□□□□□ -0.81
MSP1YGR028W TRP5P00931 707 aaKnown RBP9.95□□□□□ -0.82
MSP1YGR028W CKB1P43639 278 aa9.95□□□□□ -0.82
MSP1YGR028W IOC2Q12072 812 aa9.95□□□□□ -0.82
MSP1YGR028W PDR10P51533 1564 aa9.95□□□□□ -0.82
MSP1YGR028W MLP2P40457 1679 aa9.95□□□□□ -0.82
MSP1YGR028W TRM3Q07527 1436 aa9.93□□□□□ -0.82
MSP1YGR028W VPS70P47161 811 aa9.93□□□□□ -0.82
MSP1YGR028W JIP4Q03361 876 aa9.92□□□□□ -0.82
MSP1YGR028W TAF7Q05021 590 aa9.89□□□□□ -0.83
MSP1YGR028W PTC4P38089 393 aa9.88□□□□□ -0.83
MSP1YGR028W YNL035CP53962 389 aaKnown RBP9.88□□□□□ -0.83
MSP1YGR028W YEL023CP39992 682 aa9.87□□□□□ -0.83
MSP1YGR028W YGR273CP53329 174 aa9.87□□□□□ -0.83
MSP1YGR028W LDB19Q12502 818 aa9.87□□□□□ -0.83
MSP1YGR028W BUD3P25558 1636 aa9.85□□□□□ -0.83
MSP1YGR028W REF2P42073 533 aaPredicted RBP9.84□□□□□ -0.83
MSP1YGR028W SEC61P32915 480 aa9.83□□□□□ -0.84
MSP1YGR028W SOL3P38858 249 aa9.83□□□□□ -0.84
MSP1YGR028W ARO1P08566 1588 aaKnown RBP9.83□□□□□ -0.84
MSP1YGR028W RTG1P32607 177 aa9.82□□□□□ -0.84
MSP1YGR028W NST1P53935 1240 aa9.82□□□□□ -0.84
MSP1YGR028W GEA1P47102 1408 aaPredicted RBP9.82□□□□□ -0.84
MSP1YGR028W AI4P03878 556 aa9.81□□□□□ -0.84
MSP1YGR028W MPH3P0CE00 602 aa9.81□□□□□ -0.84
MSP1YGR028W DAN4P47179 1161 aa9.8□□□□□ -0.84
MSP1YGR028W YOR093CQ12275 1648 aa9.79□□□□□ -0.84
MSP1YGR028W TY3B-GQ99315 1547 aa9.78□□□□□ -0.84
MSP1YGR028W FKH1P40466 484 aa9.78□□□□□ -0.84
MSP1YGR028W TFG1P41895 735 aaPredicted RBP9.78□□□□□ -0.84
MSP1YGR028W MAK21Q12176 1025 aaKnown RBP9.78□□□□□ -0.84
MSP1YGR028W CAT8P39113 1433 aa9.78□□□□□ -0.84
MSP1YGR028W NCR1Q12200 1170 aa9.76□□□□□ -0.85
MSP1YGR028W UBP14P38237 781 aaKnown RBP9.75□□□□□ -0.85
MSP1YGR028W CHC1P22137 1653 aaKnown RBP9.74□□□□□ -0.85
MSP1YGR028W YSP2Q06681 1438 aa9.73□□□□□ -0.85
MSP1YGR028W PBS2P08018 668 aa9.73□□□□□ -0.85
MSP1YGR028W VHR2P40041 505 aa9.73□□□□□ -0.85
MSP1YGR028W YLR326WQ06170 240 aaKnown RBP9.73□□□□□ -0.85
MSP1YGR028W BNR1P40450 1375 aa9.73□□□□□ -0.85
MSP1YGR028W KEX1P09620 729 aa9.72□□□□□ -0.85
MSP1YGR028W SPB4P25808 606 aaPredicted RBP9.72□□□□□ -0.85
MSP1YGR028W AIR2Q12476 344 aaKnown RBP9.71□□□□□ -0.86
MSP1YGR028W COX6P00427 148 aa9.7□□□□□ -0.86
MSP1YGR028W YBT1P32386 1661 aa9.7□□□□□ -0.86
MSP1YGR028W KIC1P38692 1080 aa9.69□□□□□ -0.86
MSP1YGR028W YAP3P38749 330 aa9.69□□□□□ -0.86
MSP1YGR028W RAD54P32863 898 aa9.68□□□□□ -0.86
MSP1YGR028W DSF2P38213 736 aa9.68□□□□□ -0.86
MSP1YGR028W YDR090CQ03193 310 aa9.66□□□□□ -0.86
MSP1YGR028W YDL129WQ07555 291 aa9.66□□□□□ -0.86
MSP1YGR028W DNF3Q12674 1656 aa9.66□□□□□ -0.86
MSP1YGR028W ILV3P39522 585 aaKnown RBP9.65□□□□□ -0.86
MSP1YGR028W YJL171CP46992 396 aa9.65□□□□□ -0.86
MSP1YGR028W PML39Q03760 334 aa9.64□□□□□ -0.87
MSP1YGR028W PCS60P38137 543 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
MSP1YGR028W RPP1BP10622 106 aaKnown RBP9.62□□□□□ -0.87
MSP1YGR028W MAM3Q12296 706 aa9.62□□□□□ -0.87
MSP1YGR028W SEC7P11075 2009 aaKnown RBP9.61□□□□□ -0.87
MSP1YGR028W LEU3P08638 886 aa9.61□□□□□ -0.87
MSP1YGR028W SLI15P38283 698 aa9.6□□□□□ -0.87
MSP1YGR028W MAK10Q02197 733 aa9.6□□□□□ -0.87
MSP1YGR028W BMT6Q12291 365 aa9.6□□□□□ -0.87
MSP1YGR028W SRB8P25648 1427 aa9.57□□□□□ -0.88
MSP1YGR028W SAP30P38429 201 aa9.55□□□□□ -0.88
MSP1YGR028W PEX29Q03370 554 aa9.55□□□□□ -0.88
MSP1YGR028W URN1Q06525 465 aaKnown RBP9.55□□□□□ -0.88
MSP1YGR028W MID1P41821 548 aa9.54□□□□□ -0.88
MSP1YGR028W BUD21Q08492 214 aaPredicted RBP9.53□□□□□ -0.88
MSP1YGR028W IES2P40154 320 aa9.51□□□□□ -0.89
MSP1YGR028W DPL1Q05567 589 aa9.51□□□□□ -0.89
MSP1YGR028W TYS1P36421 394 aaKnown RBP9.49□□□□□ -0.89
MSP1YGR028W IPL1P38991 367 aa9.49□□□□□ -0.89
MSP1YGR028W MPC54Q08550 464 aa9.49□□□□□ -0.89
MSP1YGR028W ARH1P48360 493 aa9.47□□□□□ -0.89
MSP1YGR028W CSC1Q06538 782 aa9.47□□□□□ -0.89
MSP1YGR028W PSE1P32337 1089 aaKnown RBP9.46□□□□□ -0.9
MSP1YGR028W ORC6P38826 435 aa9.46□□□□□ -0.9
MSP1YGR028W NUP42P49686 430 aaKnown RBP9.46□□□□□ -0.9
MSP1YGR028W CDC73Q06697 393 aa9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms