RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C AIM7Q12156 149 aa5.91□□□□□ -1.46
SWC4YGR002C NIS1P53939 407 aa5.9□□□□□ -1.47
SWC4YGR002C SAS4Q04003 481 aa5.9□□□□□ -1.47
SWC4YGR002C FPK1P53739 893 aa5.87□□□□□ -1.47
SWC4YGR002C ERF2Q06551 359 aa5.87□□□□□ -1.47
SWC4YGR002C TY1A-DR4O74302 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-HP0C2I4 478 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-AP0CX57 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-PR1P0CX58 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ORP0CX59 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-PR2P0CX60 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-DR5P0CX65 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ER2P0CX66 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-GR3P0CX67 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-LR1P0CX68 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-MR2P0CX69 440 aa5.86□□□□□ -1.47
SWC4YGR002C SEC2P17065 759 aa5.86□□□□□ -1.47
SWC4YGR002C SPT16P32558 1035 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-JR2P47099 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-DR1Q03856 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-ML1Q04706 440 aaKnown RBP5.86□□□□□ -1.47
SWC4YGR002C TY1A-BRQ12217 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-NL2Q12470 440 aa5.86□□□□□ -1.47
SWC4YGR002C TY1A-GR2Q12485 440 aa5.86□□□□□ -1.47
SWC4YGR002C PAT1P25644 796 aaKnown RBP5.85□□□□□ -1.47
SWC4YGR002C RRN7P40992 514 aa5.85□□□□□ -1.47
SWC4YGR002C YNL115CP53925 644 aa5.85□□□□□ -1.47
SWC4YGR002C DPS1P04802 557 aaKnown RBP5.84□□□□□ -1.47
SWC4YGR002C SIT4P20604 311 aa5.84□□□□□ -1.47
SWC4YGR002C MRF1P30775 413 aaPredicted RBP5.84□□□□□ -1.47
SWC4YGR002C RTF1P53064 558 aa5.84□□□□□ -1.47
SWC4YGR002C ERG12P07277 443 aa5.83□□□□□ -1.48
SWC4YGR002C SLY41P22215 453 aa5.83□□□□□ -1.48
SWC4YGR002C GLN1P32288 370 aaKnown RBP5.82□□□□□ -1.48
SWC4YGR002C MMP1Q12372 583 aa5.82□□□□□ -1.48
SWC4YGR002C SCJ1P25303 377 aa5.82□□□□□ -1.48
SWC4YGR002C YEL077CQ3E7X8 1277 aa5.82□□□□□ -1.48
SWC4YGR002C HST2P53686 357 aa5.81□□□□□ -1.48
SWC4YGR002C TYW1Q08960 810 aaKnown RBP5.81□□□□□ -1.48
SWC4YGR002C CSN12P47130 423 aa5.8□□□□□ -1.48
SWC4YGR002C TBF1Q02457 562 aa5.8□□□□□ -1.48
SWC4YGR002C SDH2P21801 266 aa5.79□□□□□ -1.48
SWC4YGR002C GUA1P38625 525 aaKnown RBP5.79□□□□□ -1.48
SWC4YGR002C TUB4P53378 473 aa5.79□□□□□ -1.48
SWC4YGR002C ESS1P22696 170 aa5.78□□□□□ -1.48
SWC4YGR002C PAC1P39946 494 aaKnown RBP5.78□□□□□ -1.48
SWC4YGR002C DMA2P53924 522 aa5.78□□□□□ -1.48
SWC4YGR002C AMS1P22855 1083 aa5.77□□□□□ -1.49
SWC4YGR002C RAS1P01119 309 aa5.76□□□□□ -1.49
SWC4YGR002C AGE1Q04412 482 aa5.76□□□□□ -1.49
SWC4YGR002C SSA2P10592 639 aaKnown RBP5.75□□□□□ -1.49
SWC4YGR002C FRK1Q03002 865 aaPredicted RBP5.75□□□□□ -1.49
SWC4YGR002C PKH3Q03306 898 aaPredicted RBP5.75□□□□□ -1.49
SWC4YGR002C KTR1P27810 393 aaKnown RBP5.74□□□□□ -1.49
SWC4YGR002C YJU3P28321 313 aa5.74□□□□□ -1.49
SWC4YGR002C PUS6P53294 404 aa5.74□□□□□ -1.49
SWC4YGR002C TRM1P15565 570 aaKnown RBP5.74□□□□□ -1.49
SWC4YGR002C ARG8P18544 423 aa5.74□□□□□ -1.49
SWC4YGR002C KXD1P53158 218 aa5.74□□□□□ -1.49
SWC4YGR002C CST6P40535 587 aa5.73□□□□□ -1.49
SWC4YGR002C YDL206WQ12424 762 aa5.73□□□□□ -1.49
SWC4YGR002C BDP1P46678 594 aa5.72□□□□□ -1.49
SWC4YGR002C LAM6Q08001 693 aa5.71□□□□□ -1.5
SWC4YGR002C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SWC4YGR002C HPC2Q01448 625 aa5.7□□□□□ -1.5
SWC4YGR002C TFB3Q03290 321 aa5.7□□□□□ -1.5
SWC4YGR002C ALR1Q08269 859 aa5.7□□□□□ -1.5
SWC4YGR002C RGA2Q06407 1009 aa5.69□□□□□ -1.5
SWC4YGR002C BRL1P38770 471 aa5.68□□□□□ -1.5
SWC4YGR002C RAD59Q12223 238 aa5.68□□□□□ -1.5
SWC4YGR002C PDC1P06169 563 aaKnown RBP5.67□□□□□ -1.5
SWC4YGR002C HXT10P43581 546 aa5.67□□□□□ -1.5
SWC4YGR002C HGH1P48362 394 aaKnown RBP5.67□□□□□ -1.5
SWC4YGR002C RPA14P50106 137 aa5.67□□□□□ -1.5
SWC4YGR002C MOD5P07884 428 aa5.66□□□□□ -1.5
SWC4YGR002C TAF7Q05021 590 aa5.66□□□□□ -1.5
SWC4YGR002C PUS5Q06244 254 aa5.66□□□□□ -1.5
SWC4YGR002C PKC1P24583 1151 aa5.65□□□□□ -1.5
SWC4YGR002C YPR097WQ06839 1073 aa5.65□□□□□ -1.5
SWC4YGR002C RSC30P38781 883 aa5.65□□□□□ -1.51
SWC4YGR002C RRD1P40454 393 aaKnown RBP5.65□□□□□ -1.51
SWC4YGR002C CLA4P48562 842 aa5.65□□□□□ -1.51
SWC4YGR002C TPD3P31383 635 aa5.63□□□□□ -1.51
SWC4YGR002C AIR1P40507 360 aaKnown RBP5.63□□□□□ -1.51
SWC4YGR002C TRK1P12685 1235 aa5.62□□□□□ -1.51
SWC4YGR002C KIP2P28743 706 aa5.62□□□□□ -1.51
SWC4YGR002C HED1Q03937 162 aa5.62□□□□□ -1.51
SWC4YGR002C YBL036CP38197 257 aa5.61□□□□□ -1.51
SWC4YGR002C SRC1Q03707 834 aa5.61□□□□□ -1.51
SWC4YGR002C SYH1Q02875 849 aaKnown RBP5.6□□□□□ -1.51
SWC4YGR002C IXR1P33417 597 aa5.59□□□□□ -1.51
SWC4YGR002C CDC4P07834 779 aa5.57□□□□□ -1.52
SWC4YGR002C YJL007CP47080 104 aa5.57□□□□□ -1.52
SWC4YGR002C MAK16P10962 306 aaPredicted RBP5.57□□□□□ -1.52
SWC4YGR002C CSE4P36012 229 aa5.56□□□□□ -1.52
SWC4YGR002C HST3P53687 447 aa5.56□□□□□ -1.52
SWC4YGR002C TEC1P18412 486 aa5.55□□□□□ -1.52
SWC4YGR002C VAC17P25591 423 aa5.55□□□□□ -1.52
SWC4YGR002C BIO2P32451 375 aa5.55□□□□□ -1.52
SWC4YGR002C BIM1P40013 344 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms