RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	YLL066C	Q99208	1374 aa		11.84	□□□□□ -0.51
LSM5	YER146W	SPT7	P35177	1332 aa		11.84	□□□□□ -0.51
LSM5	YER146W	PPH3	P32345	308 aa		11.83	□□□□□ -0.52
LSM5	YER146W	THI12	P42883	340 aa		11.83	□□□□□ -0.52
LSM5	YER146W	THI5	P43534	340 aa		11.83	□□□□□ -0.52
LSM5	YER146W	THI11	P47183	340 aa		11.83	□□□□□ -0.52
LSM5	YER146W	RCM1	P53972	490 aa		11.83	□□□□□ -0.52
LSM5	YER146W	THI13	Q07748	340 aa		11.83	□□□□□ -0.52
LSM5	YER146W	PSD2	P53037	1138 aa	Known RBP	11.78	□□□□□ -0.52
LSM5	YER146W	RTG3	P38165	486 aa		11.77	□□□□□ -0.53
LSM5	YER146W	ENP1	P38333	483 aa	Known RBP	11.77	□□□□□ -0.53
LSM5	YER146W	ADE6	P38972	1358 aa	Known RBP	11.76	□□□□□ -0.53
LSM5	YER146W	MLP1	Q02455	1875 aa	Known RBP	11.76	□□□□□ -0.53
LSM5	YER146W	PRP43	P53131	767 aa	Known RBP	11.74	□□□□□ -0.53
LSM5	YER146W	LEU2	P04173	364 aa	Predicted RBP	11.73	□□□□□ -0.53
LSM5	YER146W	IOC4	Q04213	475 aa		11.73	□□□□□ -0.53
LSM5	YER146W	MTR4	P47047	1073 aa	Known RBP	11.72	□□□□□ -0.53
LSM5	YER146W	YFR006W	P43590	535 aa		11.71	□□□□□ -0.53
LSM5	YER146W	NST1	P53935	1240 aa		11.71	□□□□□ -0.53
LSM5	YER146W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	RIP-Chip
LSM5	YER146W	TAP42	Q04372	366 aa		11.68	□□□□□ -0.54
LSM5	YER146W	YEF3	P16521	1044 aa	Known RBP	11.67	□□□□□ -0.54
LSM5	YER146W	PTP3	P40048	928 aa		11.66	□□□□□ -0.54
LSM5	YER146W	NOP2	P40991	618 aa	Known RBP	11.65	□□□□□ -0.54
LSM5	YER146W	PDI1	P17967	522 aa	Known RBP	11.62	□□□□□ -0.55
LSM5	YER146W	AUS1	Q08409	1394 aa		11.61	□□□□□ -0.55
LSM5	YER146W	GRX4	P32642	244 aa		11.6	□□□□□ -0.55
LSM5	YER146W	LEU3	P08638	886 aa		11.59	□□□□□ -0.55
LSM5	YER146W	TRK1	P12685	1235 aa		11.59	□□□□□ -0.55
LSM5	YER146W	RTF1	P53064	558 aa		11.58	□□□□□ -0.56
LSM5	YER146W	TY4B-H	P0C2J7	1802 aa		11.58	□□□□□ -0.56
LSM5	YER146W	TY4B-J	P47024	1803 aa		11.58	□□□□□ -0.56
LSM5	YER146W	RPS24A	P0CX31	135 aa	Known RBP	11.57	□□□□□ -0.56
LSM5	YER146W	RPS24B	P0CX32	135 aa	Known RBP	11.57	□□□□□ -0.56
LSM5	YER146W	CSE4	P36012	229 aa		11.56	□□□□□ -0.56
LSM5	YER146W	PRS1	P32895	427 aa	Known RBP	11.54	□□□□□ -0.56
LSM5	YER146W	HIM1	Q06674	414 aa		11.54	□□□□□ -0.56
LSM5	YER146W	PRP5	P21372	849 aa	Predicted RBP	11.52	□□□□□ -0.57
LSM5	YER146W	YRF1-2	P40105	1681 aa		11.52	□□□□□ -0.57
LSM5	YER146W	RPP0	P05317	312 aa	Known RBP	11.51	□□□□□ -0.57
LSM5	YER146W	KAR2	P16474	682 aa	Known RBP	11.51	□□□□□ -0.57
LSM5	YER146W	RRP46	P53256	223 aa	Predicted RBP	11.51	□□□□□ -0.57
LSM5	YER146W	RRP5	Q05022	1729 aa	Known RBP	11.51	□□□□□ -0.57
LSM5	YER146W	RPO41	P13433	1351 aa	Known RBP	11.5	□□□□□ -0.57
LSM5	YER146W	PRP45	P28004	379 aa	Predicted RBP	11.49	□□□□□ -0.57
LSM5	YER146W	YAH1	Q12184	172 aa	Known RBP	11.48	□□□□□ -0.57
LSM5	YER146W	GAS4	Q08271	471 aa		11.47	□□□□□ -0.57
LSM5	YER146W	SLM3	Q12093	417 aa		11.47	□□□□□ -0.57
LSM5	YER146W	DPS1	P04802	557 aa	Known RBP	11.46	□□□□□ -0.57
LSM5	YER146W	MSB3	P48566	633 aa	Predicted RBP	11.45	□□□□□ -0.58
LSM5	YER146W	YIL177C	P40434	1758 aa		11.45	□□□□□ -0.58
LSM5	YER146W	YJL225C	P40889	1758 aa		11.45	□□□□□ -0.58
LSM5	YER146W	SNF2	P22082	1703 aa		11.45	□□□□□ -0.58
LSM5	YER146W	APC1	P53886	1748 aa		11.44	□□□□□ -0.58
LSM5	YER146W	REB1	P21538	810 aa		11.42	□□□□□ -0.58
LSM5	YER146W	VPS27	P40343	622 aa	Known RBP	11.42	□□□□□ -0.58
LSM5	YER146W	YDL144C	Q07589	356 aa		11.42	□□□□□ -0.58
LSM5	YER146W	YRF1-4	O13559	1382 aa		11.41	□□□□□ -0.58
LSM5	YER146W	PRD1	P25375	712 aa		11.4	□□□□□ -0.58
LSM5	YER146W	RTR1	P40084	226 aa	Predicted RBP	11.4	□□□□□ -0.58
LSM5	YER146W	CDC45	Q08032	650 aa		11.4	□□□□□ -0.58
LSM5	YER146W	ENT1	Q12518	454 aa		11.4	□□□□□ -0.58
LSM5	YER146W	PAP2	P53632	584 aa	Known RBP	11.39	□□□□□ -0.59
LSM5	YER146W	TCB1	Q12466	1186 aa		11.39	□□□□□ -0.59
LSM5	YER146W	RSF2	P46974	1380 aa		11.39	□□□□□ -0.59
LSM5	YER146W	AKL1	P38080	1108 aa	Known RBP	11.37	□□□□□ -0.59
LSM5	YER146W	URB1	P34241	1764 aa	Known RBP	11.36	□□□□□ -0.59
LSM5	YER146W	MPP10	P47083	593 aa	Known RBP	11.36	□□□□□ -0.59
LSM5	YER146W	DSD1	P53095	428 aa		11.36	□□□□□ -0.59
LSM5	YER146W	YRB30	P53107	440 aa	Predicted RBP	11.36	□□□□□ -0.59
LSM5	YER146W	ENV9	Q08651	330 aa		11.36	□□□□□ -0.59
LSM5	YER146W	FKS3	Q04952	1785 aa		11.36	□□□□□ -0.59
LSM5	YER146W	APP1	P53933	587 aa		11.35	□□□□□ -0.59
LSM5	YER146W	THI22	Q06490	572 aa		11.35	□□□□□ -0.59
LSM5	YER146W	SIR4	P11978	1358 aa		11.35	□□□□□ -0.59
LSM5	YER146W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.34	□□□□□ -0.59	not detected
LSM5	YER146W	CTF4	Q01454	927 aa		11.34	□□□□□ -0.59
LSM5	YER146W	SUI2	P20459	304 aa	Known RBP	11.33	□□□□□ -0.6
LSM5	YER146W	XKS1	P42826	600 aa		11.33	□□□□□ -0.6
LSM5	YER146W	HEF3	P53978	1044 aa	Known RBP	11.32	□□□□□ -0.6
LSM5	YER146W	RCR1	P38212	213 aa		11.31	□□□□□ -0.6
LSM5	YER146W	RVB2	Q12464	471 aa	Known RBP	11.31	□□□□□ -0.6
LSM5	YER146W	NTH2	P35172	780 aa		11.3	□□□□□ -0.6
LSM5	YER146W	SAP155	P43612	1002 aa		11.3	□□□□□ -0.6
LSM5	YER146W	YNL050C	P53952	270 aa		11.3	□□□□□ -0.6
LSM5	YER146W	IES2	P40154	320 aa		11.29	□□□□□ -0.6
LSM5	YER146W	YRF1-3	P0CX14	1859 aa		11.28	□□□□□ -0.6
LSM5	YER146W	YRF1-7	P0CX15	1859 aa		11.28	□□□□□ -0.6
LSM5	YER146W	YRF1-6	P53819	1859 aa		11.28	□□□□□ -0.6
LSM5	YER146W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
LSM5	YER146W	IMH1	Q06704	911 aa	Known RBP	11.26	□□□□□ -0.61
LSM5	YER146W	RTT109	Q07794	436 aa		11.26	□□□□□ -0.61
LSM5	YER146W	TPD3	P31383	635 aa		11.25	□□□□□ -0.61
LSM5	YER146W	HSP104	P31539	908 aa	Known RBP	11.25	□□□□□ -0.61
LSM5	YER146W	INP54	Q08227	384 aa	Known RBP	11.25	□□□□□ -0.61
LSM5	YER146W	MAM1	P40065	302 aa		11.24	□□□□□ -0.61
LSM5	YER146W	AOS1	Q06624	347 aa		11.24	□□□□□ -0.61
LSM5	YER146W	ROM2	P51862	1356 aa	Known RBP	11.24	□□□□□ -0.61
LSM5	YER146W	MEC3	Q02574	474 aa		11.22	□□□□□ -0.61
LSM5	YER146W	EDE1	P34216	1381 aa		11.21	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms