RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W CBF5P33322 483 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
HKR1YDR420W MET10P39692 1035 aa1.69□□□□□ -2.14
HKR1YDR420W SAC3P46674 1301 aa1.68□□□□□ -2.14
HKR1YDR420W TRA1P38811 3744 aa1.68□□□□□ -2.14
HKR1YDR420W JNM1P36224 373 aa1.68□□□□□ -2.14
HKR1YDR420W CDC27P38042 758 aa1.68□□□□□ -2.14
HKR1YDR420W CHZ1P40019 153 aaPredicted RBP1.68□□□□□ -2.14
HKR1YDR420W PAN1P32521 1480 aa1.68□□□□□ -2.14
HKR1YDR420W TY2B-BQ12491 1770 aa1.68□□□□□ -2.14
HKR1YDR420W TOA1P32773 286 aa1.68□□□□□ -2.14
HKR1YDR420W TAN1P53072 289 aaPredicted RBP1.68□□□□□ -2.14
HKR1YDR420W LTE1P07866 1435 aa1.68□□□□□ -2.14
HKR1YDR420W NUP159P40477 1460 aa1.68□□□□□ -2.14
HKR1YDR420W MYO2P19524 1574 aaKnown RBP1.68□□□□□ -2.14
HKR1YDR420W SPT2P06843 333 aaPredicted RBP1.68□□□□□ -2.14
HKR1YDR420W VPS15P22219 1454 aa1.68□□□□□ -2.14
HKR1YDR420W TIF5P38431 405 aaKnown RBP1.68□□□□□ -2.14
HKR1YDR420W PIB1Q06651 286 aa1.68□□□□□ -2.14
HKR1YDR420W YRF1-1P0CX20 1796 aa1.68□□□□□ -2.14
HKR1YDR420W YRF1-5P0CX21 1796 aa1.68□□□□□ -2.14
HKR1YDR420W YRF1-8P0CX22 1796 aa1.68□□□□□ -2.14
HKR1YDR420W ORC1P54784 914 aaPredicted RBP1.68□□□□□ -2.14
HKR1YDR420W YMR111CQ04461 462 aaPredicted RBP1.68□□□□□ -2.14
HKR1YDR420W BUD3P25558 1636 aa1.67□□□□□ -2.14
HKR1YDR420W TY4A-JP47023 414 aa1.67□□□□□ -2.14
HKR1YDR420W TLG1Q03322 224 aa1.67□□□□□ -2.14
HKR1YDR420W YRM1Q12340 786 aa1.67□□□□□ -2.14
HKR1YDR420W NOP58Q12499 511 aaKnown RBP1.67□□□□□ -2.14
HKR1YDR420W RPP2AP05319 106 aaKnown RBP1.67□□□□□ -2.14
HKR1YDR420W TFC3P34111 1160 aa1.67□□□□□ -2.14
HKR1YDR420W HOS4P40480 1083 aa1.67□□□□□ -2.14
HKR1YDR420W RTF1P53064 558 aa1.67□□□□□ -2.14
HKR1YDR420W SPC19Q03954 165 aa1.67□□□□□ -2.14
HKR1YDR420W MDM38Q08179 573 aa1.67□□□□□ -2.14
HKR1YDR420W YSH1Q06224 779 aaPredicted RBP1.67□□□□□ -2.14
HKR1YDR420W TY1B-DR3Q99231 1755 aa1.67□□□□□ -2.14
HKR1YDR420W NOC2P39744 710 aaKnown RBP1.67□□□□□ -2.14
HKR1YDR420W STU1P38198 1513 aa1.67□□□□□ -2.14
HKR1YDR420W YPK9Q12697 1472 aa1.67□□□□□ -2.14
HKR1YDR420W NPR3P38742 1146 aa1.66□□□□□ -2.14
HKR1YDR420W SYH1Q02875 849 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W NMD2P38798 1089 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W PET100P38958 111 aa1.66□□□□□ -2.14
HKR1YDR420W YNL247WP53852 767 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W YLR326WQ06170 240 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W YOL036WQ08206 761 aa1.66□□□□□ -2.14
HKR1YDR420W DNF2Q12675 1612 aa1.66□□□□□ -2.14
HKR1YDR420W ESF2P53743 316 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W MDG1P53885 366 aa1.66□□□□□ -2.14
HKR1YDR420W CEF1Q03654 590 aaPredicted RBP1.66□□□□□ -2.14
HKR1YDR420W NTE1Q04958 1679 aa1.66□□□□□ -2.14
HKR1YDR420W SPS1P08458 490 aa1.66□□□□□ -2.14
HKR1YDR420W CDC60P26637 1090 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W RPC37P36121 282 aa1.66□□□□□ -2.14
HKR1YDR420W TMA64Q04600 565 aaKnown RBP1.66□□□□□ -2.14
HKR1YDR420W YVC1Q12324 675 aa1.66□□□□□ -2.14
HKR1YDR420W NUP170P38181 1502 aa1.66□□□□□ -2.14
HKR1YDR420W ULS1Q08562 1619 aa1.66□□□□□ -2.14
HKR1YDR420W ILV3P39522 585 aaKnown RBP1.65□□□□□ -2.14
HKR1YDR420W RPO31P04051 1460 aa1.65□□□□□ -2.14
HKR1YDR420W SUI2P20459 304 aaKnown RBP1.65□□□□□ -2.14
HKR1YDR420W SAS3P34218 831 aa1.65□□□□□ -2.14
HKR1YDR420W REI1P38344 393 aaPredicted RBP1.65□□□□□ -2.14
HKR1YDR420W ECM16Q04217 1267 aaKnown RBP1.65□□□□□ -2.14
HKR1YDR420W YMR196WQ04336 1088 aa1.65□□□□□ -2.14
HKR1YDR420W MET5P47169 1442 aa1.65□□□□□ -2.15
HKR1YDR420W MEF1P25039 761 aa1.65□□□□□ -2.15
HKR1YDR420W POL4P25615 582 aa1.65□□□□□ -2.15
HKR1YDR420W YGR130CP53278 816 aa1.65□□□□□ -2.15
HKR1YDR420W RIA1P53893 1110 aa1.65□□□□□ -2.15
HKR1YDR420W SPP41P38904 1435 aa1.65□□□□□ -2.15
HKR1YDR420W SIN3P22579 1536 aa1.65□□□□□ -2.15
HKR1YDR420W THR4P16120 514 aaKnown RBP1.65□□□□□ -2.15
HKR1YDR420W VPS27P40343 622 aaKnown RBP1.65□□□□□ -2.15
HKR1YDR420W APP1P53933 587 aa1.65□□□□□ -2.15
HKR1YDR420W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
HKR1YDR420W USO1P25386 1790 aa1.65□□□□□ -2.15
HKR1YDR420W KSS1P14681 368 aa1.65□□□□□ -2.15
HKR1YDR420W MSM1P22438 575 aa1.65□□□□□ -2.15
HKR1YDR420W APL5Q08951 932 aaKnown RBP1.65□□□□□ -2.15
HKR1YDR420W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
HKR1YDR420W NNF1P47149 201 aa1.64□□□□□ -2.15
HKR1YDR420W ISW2Q08773 1120 aa1.64□□□□□ -2.15
HKR1YDR420W SHM1P37292 490 aaPredicted RBP1.64□□□□□ -2.15
HKR1YDR420W AIM21P40563 679 aa1.64□□□□□ -2.15
HKR1YDR420W BRE2P43132 505 aa1.64□□□□□ -2.15
HKR1YDR420W YJR008WP47085 338 aa1.64□□□□□ -2.15
HKR1YDR420W CWC21Q03375 135 aaKnown RBP1.64□□□□□ -2.15
HKR1YDR420W PDR10P51533 1564 aa1.64□□□□□ -2.15
HKR1YDR420W NAS2P40555 220 aa1.64□□□□□ -2.15
HKR1YDR420W YSP2Q06681 1438 aa1.64□□□□□ -2.15
HKR1YDR420W NUP157P40064 1391 aaKnown RBP1.64□□□□□ -2.15
HKR1YDR420W MBR1P23493 339 aa1.64□□□□□ -2.15
HKR1YDR420W ENT3P47160 408 aa1.64□□□□□ -2.15
HKR1YDR420W KEL2P50090 882 aa1.64□□□□□ -2.15
HKR1YDR420W HST2P53686 357 aa1.64□□□□□ -2.15
HKR1YDR420W SPO14P36126 1683 aa1.64□□□□□ -2.15
HKR1YDR420W GEF1P37020 779 aa1.63□□□□□ -2.15
HKR1YDR420W KIP3P53086 805 aaKnown RBP1.63□□□□□ -2.15
HKR1YDR420W CLF1Q12309 687 aaPredicted RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms