RNA–Protein interactions for RNA: YDR260C

SWM1, Transcript of Subunit of the anaphase-promoting complex (APC), yeastyeast

Gene SWM1, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM1YDR260C NOP7P53261 605 aaKnown RBP11.73□□□□□ -0.53
SWM1YDR260C RCM1P53972 490 aa11.73□□□□□ -0.53
SWM1YDR260C YRF1-2P40105 1681 aa11.71□□□□□ -0.53
SWM1YDR260C TAF8Q03750 510 aa11.7□□□□□ -0.54
SWM1YDR260C LEU3P08638 886 aa11.66□□□□□ -0.54
SWM1YDR260C CPS1P27614 576 aa11.66□□□□□ -0.54
SWM1YDR260C TFA1P36100 482 aa11.66□□□□□ -0.54
SWM1YDR260C NAP1P25293 417 aaKnown RBP11.65□□□□□ -0.54
SWM1YDR260C PPH3P32345 308 aa11.65□□□□□ -0.54
SWM1YDR260C TY4B-HP0C2J7 1802 aa11.63□□□□□ -0.55
SWM1YDR260C TY4B-JP47024 1803 aa11.63□□□□□ -0.55
SWM1YDR260C PRP5P21372 849 aaPredicted RBP11.62□□□□□ -0.55
SWM1YDR260C RPN11P43588 306 aaKnown RBP11.59□□□□□ -0.55
SWM1YDR260C MSB3P48566 633 aaPredicted RBP11.58□□□□□ -0.56
SWM1YDR260C ESL2P36168 1195 aa11.57□□□□□ -0.56
SWM1YDR260C UBP1P25037 809 aa11.54□□□□□ -0.56
SWM1YDR260C DOT5P40553 215 aa11.54□□□□□ -0.56
SWM1YDR260C IES2P40154 320 aa11.53□□□□□ -0.56
SWM1YDR260C URB1P34241 1764 aaKnown RBP11.53□□□□□ -0.56
SWM1YDR260C PSK1P31374 1356 aa11.53□□□□□ -0.56
SWM1YDR260C YBL086CP38177 466 aa11.52□□□□□ -0.57
SWM1YDR260C LYS4P49367 693 aaPredicted RBP11.49□□□□□ -0.57
SWM1YDR260C ADE6P38972 1358 aaKnown RBP11.47□□□□□ -0.57
SWM1YDR260C SPE2P21182 396 aa11.47□□□□□ -0.57
SWM1YDR260C KIP3P53086 805 aaKnown RBP11.47□□□□□ -0.57
SWM1YDR260C ORC1P54784 914 aaPredicted RBP11.47□□□□□ -0.57
SWM1YDR260C FOX2Q02207 900 aaKnown RBP11.47□□□□□ -0.57
SWM1YDR260C TCB1Q12466 1186 aa11.47□□□□□ -0.57
SWM1YDR260C FKS3Q04952 1785 aa11.46□□□□□ -0.57
SWM1YDR260C CSE4P36012 229 aa11.45□□□□□ -0.58
SWM1YDR260C RPS24AP0CX31 135 aaKnown RBP11.44□□□□□ -0.58
SWM1YDR260C RPS24BP0CX32 135 aaKnown RBP11.44□□□□□ -0.58
SWM1YDR260C NPR2P39923 615 aa11.44□□□□□ -0.58
SWM1YDR260C YJL181WP46987 611 aa11.43□□□□□ -0.58
SWM1YDR260C SLM3Q12093 417 aa11.41□□□□□ -0.58
SWM1YDR260C RSF2P46974 1380 aa11.41□□□□□ -0.58
SWM1YDR260C UGA2P38067 497 aa11.4□□□□□ -0.58
SWM1YDR260C DIP2Q12220 943 aaPredicted RBP11.39□□□□□ -0.59
SWM1YDR260C ROM2P51862 1356 aaKnown RBP11.39□□□□□ -0.59
SWM1YDR260C COBP00163 385 aa11.38□□□□□ -0.59
SWM1YDR260C YKL133CP36066 463 aa11.38□□□□□ -0.59
SWM1YDR260C SSA2P10592 639 aaKnown RBP11.37□□□□□ -0.59
SWM1YDR260C ENP1P38333 483 aaKnown RBP11.37□□□□□ -0.59
SWM1YDR260C CHZ1P40019 153 aaPredicted RBP11.37□□□□□ -0.59
SWM1YDR260C XKS1P42826 600 aa11.37□□□□□ -0.59
SWM1YDR260C LAM6Q08001 693 aa11.36□□□□□ -0.59
SWM1YDR260C YRF1-3P0CX14 1859 aa11.36□□□□□ -0.59
SWM1YDR260C YRF1-7P0CX15 1859 aa11.36□□□□□ -0.59
SWM1YDR260C YRF1-6P53819 1859 aa11.36□□□□□ -0.59
SWM1YDR260C LEU2P04173 364 aaPredicted RBP11.35□□□□□ -0.59
SWM1YDR260C PRP40P33203 583 aaKnown RBP11.35□□□□□ -0.59
SWM1YDR260C AVT3P36062 692 aa11.35□□□□□ -0.59
SWM1YDR260C YRF1-4O13559 1382 aa11.35□□□□□ -0.59
SWM1YDR260C ALD2P47771 506 aa11.34□□□□□ -0.59
SWM1YDR260C CTH1P47976 325 aa11.34□□□□□ -0.59
SWM1YDR260C YIL177CP40434 1758 aa11.33□□□□□ -0.59
SWM1YDR260C YJL225CP40889 1758 aa11.33□□□□□ -0.59
SWM1YDR260C MTR4P47047 1073 aaKnown RBP11.32□□□□□ -0.6
SWM1YDR260C YKR075CP36155 307 aa11.31□□□□□ -0.6
SWM1YDR260C PRP43P53131 767 aaKnown RBP11.3□□□□□ -0.6
SWM1YDR260C SSA1P10591 642 aaKnown RBP11.29□□□□□ -0.6
SWM1YDR260C YEF3P16521 1044 aaKnown RBP11.28□□□□□ -0.6
SWM1YDR260C GTT3P39996 337 aa11.28□□□□□ -0.6
SWM1YDR260C YLR419WQ06698 1435 aaKnown RBP11.27□□□□□ -0.6
SWM1YDR260C APC1P53886 1748 aa11.27□□□□□ -0.61
SWM1YDR260C FRK1Q03002 865 aaPredicted RBP11.27□□□□□ -0.61
SWM1YDR260C EDE1P34216 1381 aa11.27□□□□□ -0.61
SWM1YDR260C GAS4Q08271 471 aa11.26□□□□□ -0.61
SWM1YDR260C DPS1P04802 557 aaKnown RBP11.25□□□□□ -0.61
SWM1YDR260C YML133CQ03099 1374 aa11.25□□□□□ -0.61
SWM1YDR260C YLL067CQ07888 1374 aa11.25□□□□□ -0.61
SWM1YDR260C YLL066CQ99208 1374 aa11.25□□□□□ -0.61
SWM1YDR260C ADE16P54113 591 aaKnown RBP11.19□□□□□ -0.62
SWM1YDR260C RCR1P38212 213 aa11.18□□□□□ -0.62
SWM1YDR260C RPG1P38249 964 aaKnown RBP11.16□□□□□ -0.62
SWM1YDR260C MEC3Q02574 474 aa11.14□□□□□ -0.63
SWM1YDR260C ALD3P54114 506 aa11.13□□□□□ -0.63
SWM1YDR260C SNF2P22082 1703 aa11.12□□□□□ -0.63
SWM1YDR260C EAF6P47128 113 aa11.12□□□□□ -0.63
SWM1YDR260C MSB4Q12317 492 aa11.12□□□□□ -0.63
SWM1YDR260C RPO41P13433 1351 aaKnown RBP11.12□□□□□ -0.63
SWM1YDR260C BDF1P35817 686 aa11.11□□□□□ -0.63
SWM1YDR260C RTG3P38165 486 aa11.11□□□□□ -0.63
SWM1YDR260C ATG13Q06628 738 aa11.11□□□□□ -0.63
SWM1YDR260C RTF1P53064 558 aa11.1□□□□□ -0.63
SWM1YDR260C SIR4P11978 1358 aa11.1□□□□□ -0.63
SWM1YDR260C RIM15P43565 1770 aa11.09□□□□□ -0.63
SWM1YDR260C PDI1P17967 522 aaKnown RBP11.09□□□□□ -0.63
SWM1YDR260C FKH1P40466 484 aa11.09□□□□□ -0.63
SWM1YDR260C SPT7P35177 1332 aa11.09□□□□□ -0.63
SWM1YDR260C HIM1Q06674 414 aa11.08□□□□□ -0.64
SWM1YDR260C RRD1P40454 393 aaKnown RBP11.07□□□□□ -0.64
SWM1YDR260C BUG1Q12191 341 aa11.07□□□□□ -0.64
SWM1YDR260C AUS1Q08409 1394 aa11.06□□□□□ -0.64
SWM1YDR260C GRE2Q12068 342 aaKnown RBP11.06□□□□□ -0.64
SWM1YDR260C HPC2Q01448 625 aa11.05□□□□□ -0.64
SWM1YDR260C MLP1Q02455 1875 aaKnown RBP11.04□□□□□ -0.64
SWM1YDR260C MSN5P52918 1224 aa11.03□□□□□ -0.64
SWM1YDR260C OSM1P21375 501 aaKnown RBP11.02□□□□□ -0.65
SWM1YDR260C SAP155P43612 1002 aa11.02□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms