RNA–Protein interactions for RNA: YDR242W

AMD2, Transcript of Putative amidase, yeastyeast

Gene AMD2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMD2YDR242W YLL067CQ07888 1374 aa8.34□□□□□ -1.07
AMD2YDR242W YLL066CQ99208 1374 aa8.34□□□□□ -1.07
AMD2YDR242W YNR029CP53729 429 aaKnown RBP8.34□□□□□ -1.07
AMD2YDR242W SEC3P33332 1336 aaKnown RBP8.34□□□□□ -1.08
AMD2YDR242W PPH3P32345 308 aa8.34□□□□□ -1.08
AMD2YDR242W CHZ1P40019 153 aaPredicted RBP8.34□□□□□ -1.08
AMD2YDR242W DIP2Q12220 943 aaPredicted RBP8.34□□□□□ -1.08
AMD2YDR242W NSR1P27476 414 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
AMD2YDR242W NAP1P25293 417 aaKnown RBP8.31□□□□□ -1.08
AMD2YDR242W RTG3P38165 486 aa8.31□□□□□ -1.08
AMD2YDR242W YIL177CP40434 1758 aa8.3□□□□□ -1.08
AMD2YDR242W YJL225CP40889 1758 aa8.3□□□□□ -1.08
AMD2YDR242W THI12P42883 340 aa8.3□□□□□ -1.08
AMD2YDR242W THI5P43534 340 aa8.3□□□□□ -1.08
AMD2YDR242W THI11P47183 340 aa8.3□□□□□ -1.08
AMD2YDR242W THI13Q07748 340 aa8.3□□□□□ -1.08
AMD2YDR242W PSK1P31374 1356 aa8.29□□□□□ -1.08
AMD2YDR242W FKH1P40466 484 aa8.27□□□□□ -1.08
AMD2YDR242W CPS1P27614 576 aa8.27□□□□□ -1.09
AMD2YDR242W YMR196WQ04336 1088 aa8.26□□□□□ -1.09
AMD2YDR242W ENP1P38333 483 aaKnown RBP8.24□□□□□ -1.09
AMD2YDR242W SNF2P22082 1703 aa8.23□□□□□ -1.09
AMD2YDR242W RRP5Q05022 1729 aaKnown RBP8.22□□□□□ -1.09
AMD2YDR242W YEF3P16521 1044 aaKnown RBP8.21□□□□□ -1.09
AMD2YDR242W TRK1P12685 1235 aa8.21□□□□□ -1.1
AMD2YDR242W SCT1P32784 759 aa8.21□□□□□ -1.1
AMD2YDR242W ADE6P38972 1358 aaKnown RBP8.19□□□□□ -1.1
AMD2YDR242W YFR006WP43590 535 aa8.19□□□□□ -1.1
AMD2YDR242W URB1P34241 1764 aaKnown RBP8.19□□□□□ -1.1
AMD2YDR242W YRF1-2P40105 1681 aa8.18□□□□□ -1.1
AMD2YDR242W LEU2P04173 364 aaPredicted RBP8.18□□□□□ -1.1
AMD2YDR242W PRI1P10363 409 aa8.18□□□□□ -1.1
AMD2YDR242W ISW2Q08773 1120 aa8.18□□□□□ -1.1
AMD2YDR242W FKS3Q04952 1785 aa8.17□□□□□ -1.1
AMD2YDR242W AUS1Q08409 1394 aa8.17□□□□□ -1.1
AMD2YDR242W RPS24AP0CX31 135 aaKnown RBP8.16□□□□□ -1.1
AMD2YDR242W RPS24BP0CX32 135 aaKnown RBP8.16□□□□□ -1.1
AMD2YDR242W MTR4P47047 1073 aaKnown RBP8.15□□□□□ -1.1
AMD2YDR242W HIM1Q06674 414 aa8.15□□□□□ -1.1
AMD2YDR242W CSE4P36012 229 aa8.14□□□□□ -1.11
AMD2YDR242W PRS1P32895 427 aaKnown RBP8.12□□□□□ -1.11
AMD2YDR242W PDI1P17967 522 aaKnown RBP8.11□□□□□ -1.11
AMD2YDR242W AVT3P36062 692 aa8.11□□□□□ -1.11
AMD2YDR242W PRP43P53131 767 aaKnown RBP8.11□□□□□ -1.11
AMD2YDR242W APC1P53886 1748 aa8.11□□□□□ -1.11
AMD2YDR242W PTP3P40048 928 aa8.11□□□□□ -1.11
AMD2YDR242W RRP46P53256 223 aaPredicted RBP8.11□□□□□ -1.11
AMD2YDR242W GAS4Q08271 471 aa8.11□□□□□ -1.11
AMD2YDR242W KAR2P16474 682 aaKnown RBP8.1□□□□□ -1.11
AMD2YDR242W AAD16Q02895 342 aa8.1□□□□□ -1.11
AMD2YDR242W TAP42Q04372 366 aa8.1□□□□□ -1.11
AMD2YDR242W DPS1P04802 557 aaKnown RBP8.09□□□□□ -1.11
AMD2YDR242W RPG1P38249 964 aaKnown RBP8.08□□□□□ -1.12
AMD2YDR242W RTF1P53064 558 aa8.08□□□□□ -1.12
AMD2YDR242W PRP45P28004 379 aaPredicted RBP8.07□□□□□ -1.12
AMD2YDR242W YRF1-3P0CX14 1859 aa8.06□□□□□ -1.12
AMD2YDR242W YRF1-7P0CX15 1859 aa8.06□□□□□ -1.12
AMD2YDR242W YRF1-6P53819 1859 aa8.06□□□□□ -1.12
AMD2YDR242W MSB3P48566 633 aaPredicted RBP8.06□□□□□ -1.12
AMD2YDR242W PRP5P21372 849 aaPredicted RBP8.05□□□□□ -1.12
AMD2YDR242W PAP2P53632 584 aaKnown RBP8.05□□□□□ -1.12
AMD2YDR242W YDL144CQ07589 356 aa8.05□□□□□ -1.12
AMD2YDR242W GRX4P32642 244 aa8.05□□□□□ -1.12
AMD2YDR242W MPP10P47083 593 aaKnown RBP8.05□□□□□ -1.12
AMD2YDR242W RPO41P13433 1351 aaKnown RBP8.03□□□□□ -1.12
AMD2YDR242W REB1P21538 810 aa8.03□□□□□ -1.12
AMD2YDR242W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
AMD2YDR242W RTR1P40084 226 aaPredicted RBP8.02□□□□□ -1.13
AMD2YDR242W APP1P53933 587 aa8.02□□□□□ -1.13
AMD2YDR242W FUN12P39730 1002 aaKnown RBP8.02□□□□□ -1.13
AMD2YDR242W SLM3Q12093 417 aa8.01□□□□□ -1.13
AMD2YDR242W SUI2P20459 304 aaKnown RBP8□□□□□ -1.13
AMD2YDR242W IOC4Q04213 475 aa8□□□□□ -1.13
AMD2YDR242W YRF1-4O13559 1382 aa8□□□□□ -1.13
AMD2YDR242W THI22Q06490 572 aa7.99□□□□□ -1.13
AMD2YDR242W ENT1Q12518 454 aa7.99□□□□□ -1.13
AMD2YDR242W PRD1P25375 712 aa7.98□□□□□ -1.13
AMD2YDR242W RVB2Q12464 471 aaKnown RBP7.98□□□□□ -1.13
AMD2YDR242W VPS27P40343 622 aaKnown RBP7.98□□□□□ -1.13
AMD2YDR242W RPP0P05317 312 aaKnown RBP7.97□□□□□ -1.13
AMD2YDR242W AKL1P38080 1108 aaKnown RBP7.97□□□□□ -1.13
AMD2YDR242W XKS1P42826 600 aa7.96□□□□□ -1.13
AMD2YDR242W SAP155P43612 1002 aa7.96□□□□□ -1.13
AMD2YDR242W CDC45Q08032 650 aa7.96□□□□□ -1.13
AMD2YDR242W TCB1Q12466 1186 aa7.96□□□□□ -1.13
AMD2YDR242W RSF2P46974 1380 aa7.95□□□□□ -1.14
AMD2YDR242W TPD3P31383 635 aa7.95□□□□□ -1.14
AMD2YDR242W RTT109Q07794 436 aa7.95□□□□□ -1.14
AMD2YDR242W ENV9Q08651 330 aa7.95□□□□□ -1.14
AMD2YDR242W DSD1P53095 428 aa7.95□□□□□ -1.14
AMD2YDR242W HEF3P53978 1044 aaKnown RBP7.95□□□□□ -1.14
AMD2YDR242W RIM15P43565 1770 aa7.94□□□□□ -1.14
AMD2YDR242W YAH1Q12184 172 aaKnown RBP7.93□□□□□ -1.14
AMD2YDR242W RCR1P38212 213 aa7.92□□□□□ -1.14
AMD2YDR242W HSP104P31539 908 aaKnown RBP7.92□□□□□ -1.14
AMD2YDR242W SIR4P11978 1358 aa7.91□□□□□ -1.14
AMD2YDR242W NTH2P35172 780 aa7.9□□□□□ -1.14
AMD2YDR242W IES2P40154 320 aa7.9□□□□□ -1.14
AMD2YDR242W YCK3P39962 524 aa7.89□□□□□ -1.15
AMD2YDR242W IMH1Q06704 911 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms