RNA–Protein interactions for RNA: YDL054C

MCH1, Transcript of Protein with similarity to mammalian monocarboxylate permeases, yeast

Gene MCH1, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCH1	YDL054C	IRC20	Q06554	1556 aa		8.98	□□□□□ -0.97
MCH1	YDL054C	NUP157	P40064	1391 aa	Known RBP	8.98	□□□□□ -0.97
MCH1	YDL054C	SSM4	P40318	1319 aa		8.97	□□□□□ -0.97
MCH1	YDL054C	CKB1	P43639	278 aa		8.97	□□□□□ -0.97
MCH1	YDL054C	LDB19	Q12502	818 aa		8.96	□□□□□ -0.97
MCH1	YDL054C	ULI1	P43604	169 aa		8.96	□□□□□ -0.98
MCH1	YDL054C	GYP5	Q12344	894 aa		8.96	□□□□□ -0.98
MCH1	YDL054C	CAT8	P39113	1433 aa		8.95	□□□□□ -0.98
MCH1	YDL054C	PTC3	P34221	468 aa	Known RBP	8.95	□□□□□ -0.98
MCH1	YDL054C	EAP1	P36041	632 aa	Known RBP	8.95	□□□□□ -0.98
MCH1	YDL054C	DMA1	P38823	416 aa		8.94	□□□□□ -0.98
MCH1	YDL054C	PDR12	Q02785	1511 aa		8.93	□□□□□ -0.98
MCH1	YDL054C	SPO14	P36126	1683 aa		8.93	□□□□□ -0.98
MCH1	YDL054C	GDB1	Q06625	1536 aa		8.92	□□□□□ -0.98
MCH1	YDL054C	ABP1	P15891	592 aa	Known RBP	8.91	□□□□□ -0.98
MCH1	YDL054C	SET1	P38827	1080 aa	Known RBP	8.91	□□□□□ -0.98
MCH1	YDL054C	GRE2	Q12068	342 aa	Known RBP	8.91	□□□□□ -0.98
MCH1	YDL054C	IOC2	Q12072	812 aa		8.91	□□□□□ -0.98
MCH1	YDL054C	NOP53	Q12080	455 aa	Known RBP	8.91	□□□□□ -0.98
MCH1	YDL054C	LTE1	P07866	1435 aa		8.91	□□□□□ -0.98
MCH1	YDL054C	PDR10	P51533	1564 aa		8.91	□□□□□ -0.98
MCH1	YDL054C	TRP5	P00931	707 aa	Known RBP	8.89	□□□□□ -0.99
MCH1	YDL054C	BMT6	Q12291	365 aa		8.89	□□□□□ -0.99
MCH1	YDL054C	YBT1	P32386	1661 aa		8.88	□□□□□ -0.99
MCH1	YDL054C	NUP170	P38181	1502 aa		8.88	□□□□□ -0.99
MCH1	YDL054C	DCW1	P36091	449 aa		8.87	□□□□□ -0.99
MCH1	YDL054C	ATH1	P48016	1211 aa		8.86	□□□□□ -0.99
MCH1	YDL054C	HTA1	P04911	132 aa	Known RBP	8.85	□□□□□ -0.99
MCH1	YDL054C	HTA2	P04912	132 aa		8.85	□□□□□ -0.99
MCH1	YDL054C	GUT1	P32190	709 aa		8.85	□□□□□ -0.99
MCH1	YDL054C	ITT1	Q04638	464 aa		8.85	□□□□□ -0.99
MCH1	YDL054C	ARO1	P08566	1588 aa	Known RBP	8.84	□□□□□ -0.99
MCH1	YDL054C	SRB8	P25648	1427 aa		8.84	□□□□□ -0.99
MCH1	YDL054C	IQG1	Q12280	1495 aa		8.84	□□□□□ -0.99
MCH1	YDL054C	BUD3	P25558	1636 aa		8.84	□□□□□ -0.99
MCH1	YDL054C	DRS2	P39524	1355 aa		8.82	□□□□□ -1
MCH1	YDL054C	YSP2	Q06681	1438 aa		8.82	□□□□□ -1
MCH1	YDL054C	BUD21	Q08492	214 aa	Predicted RBP	8.82	□□□□□ -1
MCH1	YDL054C	RTG1	P32607	177 aa		8.77	□□□□□ -1
MCH1	YDL054C	YEL023C	P39992	682 aa		8.77	□□□□□ -1
MCH1	YDL054C	YNL035C	P53962	389 aa	Known RBP	8.77	□□□□□ -1
MCH1	YDL054C	JIP4	Q03361	876 aa		8.77	□□□□□ -1
MCH1	YDL054C	BNR1	P40450	1375 aa		8.77	□□□□□ -1.01
MCH1	YDL054C	DAN4	P47179	1161 aa		8.75	□□□□□ -1.01
MCH1	YDL054C	PTC4	P38089	393 aa		8.74	□□□□□ -1.01
MCH1	YDL054C	SOL3	P38858	249 aa		8.74	□□□□□ -1.01
MCH1	YDL054C	MMS1	Q06211	1407 aa		8.73	□□□□□ -1.01
MCH1	YDL054C	SEC61	P32915	480 aa		8.73	□□□□□ -1.01
MCH1	YDL054C	NST1	P53935	1240 aa		8.73	□□□□□ -1.01
MCH1	YDL054C	BNI1	P41832	1953 aa		8.72	□□□□□ -1.01
MCH1	YDL054C	YPR148C	Q06523	435 aa		8.72	□□□□□ -1.01
MCH1	YDL054C	NCR1	Q12200	1170 aa		8.7	□□□□□ -1.02
MCH1	YDL054C	YGR273C	P53329	174 aa		8.7	□□□□□ -1.02
MCH1	YDL054C	TRM3	Q07527	1436 aa		8.69	□□□□□ -1.02
MCH1	YDL054C	SEC7	P11075	2009 aa	Known RBP	8.65	□□□□□ -1.02
MCH1	YDL054C	AI4	P03878	556 aa		8.64	□□□□□ -1.03
MCH1	YDL054C	MPH3	P0CE00	602 aa		8.64	□□□□□ -1.03
MCH1	YDL054C	VPS70	P47161	811 aa		8.64	□□□□□ -1.03
MCH1	YDL054C	TFG1	P41895	735 aa	Predicted RBP	8.64	□□□□□ -1.03
MCH1	YDL054C	DOP1	Q03921	1698 aa		8.63	□□□□□ -1.03
MCH1	YDL054C	ILV3	P39522	585 aa	Known RBP	8.62	□□□□□ -1.03
MCH1	YDL054C	NOP7	P53261	605 aa	Known RBP	8.59	□□□□□ -1.03
MCH1	YDL054C	YDL129W	Q07555	291 aa		8.59	□□□□□ -1.03
MCH1	YDL054C	PAF1	P38351	445 aa		8.58	□□□□□ -1.04
MCH1	YDL054C	UBP14	P38237	781 aa	Known RBP	8.57	□□□□□ -1.04
MCH1	YDL054C	VHR2	P40041	505 aa		8.57	□□□□□ -1.04
MCH1	YDL054C	PML39	Q03760	334 aa		8.57	□□□□□ -1.04
MCH1	YDL054C	GCN2	P15442	1659 aa		8.57	□□□□□ -1.04
MCH1	YDL054C	CHC1	P22137	1653 aa	Known RBP	8.57	□□□□□ -1.04
MCH1	YDL054C	KEX1	P09620	729 aa		8.57	□□□□□ -1.04
MCH1	YDL054C	YLR326W	Q06170	240 aa	Known RBP	8.57	□□□□□ -1.04
MCH1	YDL054C	REF2	P42073	533 aa	Predicted RBP	8.56	□□□□□ -1.04
MCH1	YDL054C	TYS1	P36421	394 aa	Known RBP	8.55	□□□□□ -1.04
MCH1	YDL054C	SAP30	P38429	201 aa		8.55	□□□□□ -1.04
MCH1	YDL054C	PDR11	P40550	1411 aa		8.55	□□□□□ -1.04
MCH1	YDL054C	URN1	Q06525	465 aa	Known RBP	8.54	□□□□□ -1.04
MCH1	YDL054C	YAP3	P38749	330 aa		8.53	□□□□□ -1.04
MCH1	YDL054C	IPL1	P38991	367 aa		8.53	□□□□□ -1.04
MCH1	YDL054C	MID1	P41821	548 aa		8.52	□□□□□ -1.05
MCH1	YDL054C	PDR5	P33302	1511 aa	Known RBP	8.51	□□□□□ -1.05
MCH1	YDL054C	YOR093C	Q12275	1648 aa		8.51	□□□□□ -1.05
MCH1	YDL054C	VMR1	P38735	1592 aa		8.51	□□□□□ -1.05
MCH1	YDL054C	DNF2	Q12675	1612 aa		8.5	□□□□□ -1.05
MCH1	YDL054C	SLI15	P38283	698 aa		8.5	□□□□□ -1.05
MCH1	YDL054C	YDR090C	Q03193	310 aa		8.5	□□□□□ -1.05
MCH1	YDL054C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	8.49	□□□□□ -1.05	not detected
MCH1	YDL054C	RAV1	P47104	1357 aa		8.48	□□□□□ -1.05
MCH1	YDL054C	RAD54	P32863	898 aa		8.48	□□□□□ -1.05
MCH1	YDL054C	ORC1	P54784	914 aa	Predicted RBP	8.48	□□□□□ -1.05
MCH1	YDL054C	NUP188	P52593	1655 aa	Known RBP	8.47	□□□□□ -1.05
MCH1	YDL054C	IML1	P47170	1584 aa		8.47	□□□□□ -1.05
MCH1	YDL054C	POL5	P39985	1022 aa	Known RBP	8.47	□□□□□ -1.05
MCH1	YDL054C	RTC1	Q08281	1341 aa		8.46	□□□□□ -1.06
MCH1	YDL054C	TAF5	P38129	798 aa		8.45	□□□□□ -1.06
MCH1	YDL054C	MAK21	Q12176	1025 aa	Known RBP	8.45	□□□□□ -1.06
MCH1	YDL054C	PEX29	Q03370	554 aa		8.44	□□□□□ -1.06
MCH1	YDL054C	COX6	P00427	148 aa		8.43	□□□□□ -1.06
MCH1	YDL054C	PBS2	P08018	668 aa		8.43	□□□□□ -1.06
MCH1	YDL054C	BCK2	P33306	851 aa		8.43	□□□□□ -1.06
MCH1	YDL054C	KIC1	P38692	1080 aa		8.43	□□□□□ -1.06

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms