RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C BCK1Q01389 1478 aa10.15□□□□□ -0.78
RRP43YCR035C TAF8Q03750 510 aa10.14□□□□□ -0.79
RRP43YCR035C NAP1P25293 417 aaKnown RBP10.12□□□□□ -0.79
RRP43YCR035C YMR196WQ04336 1088 aa10.12□□□□□ -0.79
RRP43YCR035C CFT1Q06632 1357 aaKnown RBP10.1□□□□□ -0.79
RRP43YCR035C USO1P25386 1790 aa10.09□□□□□ -0.79
RRP43YCR035C SPE2P21182 396 aa10.09□□□□□ -0.79
RRP43YCR035C THI12P42883 340 aa10.09□□□□□ -0.79
RRP43YCR035C THI5P43534 340 aa10.09□□□□□ -0.79
RRP43YCR035C THI11P47183 340 aa10.09□□□□□ -0.79
RRP43YCR035C THI13Q07748 340 aa10.09□□□□□ -0.79
RRP43YCR035C TFC8Q12308 588 aa10.09□□□□□ -0.79
RRP43YCR035C CDC27P38042 758 aa10.08□□□□□ -0.8
RRP43YCR035C YNR029CP53729 429 aaKnown RBP10.08□□□□□ -0.8
RRP43YCR035C TY3B-IQ7LHG5 1498 aaKnown RBP10.08□□□□□ -0.8
RRP43YCR035C TY1B-NL2Q99337 1749 aaKnown RBP10.05□□□□□ -0.8
RRP43YCR035C HOP09932 586 aa10.03□□□□□ -0.8
RRP43YCR035C RCM1P53972 490 aa10.02□□□□□ -0.81
RRP43YCR035C YLR419WQ06698 1435 aaKnown RBP10.01□□□□□ -0.81
RRP43YCR035C SCT1P32784 759 aa10.01□□□□□ -0.81
RRP43YCR035C CHZ1P40019 153 aaPredicted RBP10.01□□□□□ -0.81
RRP43YCR035C PTP3P40048 928 aa10.01□□□□□ -0.81
RRP43YCR035C SSP1P38871 571 aa9.98□□□□□ -0.81
RRP43YCR035C PPH3P32345 308 aa9.97□□□□□ -0.81
RRP43YCR035C YIL055CP40523 627 aaKnown RBP9.97□□□□□ -0.81
RRP43YCR035C CPS1P27614 576 aa9.96□□□□□ -0.82
RRP43YCR035C MHP1P43638 1398 aa9.96□□□□□ -0.82
RRP43YCR035C DCD1P06773 312 aa9.94□□□□□ -0.82
RRP43YCR035C PDS5Q04264 1277 aa9.94□□□□□ -0.82
RRP43YCR035C YAH1Q12184 172 aaKnown RBP9.92□□□□□ -0.82
RRP43YCR035C PSK1P31374 1356 aa9.9□□□□□ -0.82
RRP43YCR035C RTG3P38165 486 aa9.9□□□□□ -0.82
RRP43YCR035C FKH1P40466 484 aa9.89□□□□□ -0.83
RRP43YCR035C LEU2P04173 364 aaPredicted RBP9.87□□□□□ -0.83
RRP43YCR035C PSD2P53037 1138 aaKnown RBP9.85□□□□□ -0.83
RRP43YCR035C YLR271WQ06152 274 aa9.85□□□□□ -0.83
RRP43YCR035C SPT7P35177 1332 aa9.84□□□□□ -0.83
RRP43YCR035C RSM7P47150 247 aa9.84□□□□□ -0.83
RRP43YCR035C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.84□□□□□ -0.83not detected
RRP43YCR035C SEC3P33332 1336 aaKnown RBP9.83□□□□□ -0.84
RRP43YCR035C LEU3P08638 886 aa9.83□□□□□ -0.84
RRP43YCR035C YML133CQ03099 1374 aa9.83□□□□□ -0.84
RRP43YCR035C YLL067CQ07888 1374 aa9.83□□□□□ -0.84
RRP43YCR035C YLL066CQ99208 1374 aa9.83□□□□□ -0.84
RRP43YCR035C CSE4P36012 229 aa9.82□□□□□ -0.84
RRP43YCR035C MTR4P47047 1073 aaKnown RBP9.82□□□□□ -0.84
RRP43YCR035C RPS24AP0CX31 135 aaKnown RBP9.8□□□□□ -0.84
RRP43YCR035C RPS24BP0CX32 135 aaKnown RBP9.8□□□□□ -0.84
RRP43YCR035C NST1P53935 1240 aa9.8□□□□□ -0.84
RRP43YCR035C ADE6P38972 1358 aaKnown RBP9.78□□□□□ -0.84
RRP43YCR035C PRP45P28004 379 aaPredicted RBP9.78□□□□□ -0.84
RRP43YCR035C YGL015CP33199 130 aa9.78□□□□□ -0.84
RRP43YCR035C BCH2P36122 765 aa9.78□□□□□ -0.84
RRP43YCR035C PRP43P53131 767 aaKnown RBP9.78□□□□□ -0.84
RRP43YCR035C MLP1Q02455 1875 aaKnown RBP9.76□□□□□ -0.85
RRP43YCR035C PDI1P17967 522 aaKnown RBP9.75□□□□□ -0.85
RRP43YCR035C PRP5P21372 849 aaPredicted RBP9.75□□□□□ -0.85
RRP43YCR035C RTF1P53064 558 aa9.75□□□□□ -0.85
RRP43YCR035C APP1P53933 587 aa9.74□□□□□ -0.85
RRP43YCR035C GAS4Q08271 471 aa9.74□□□□□ -0.85
RRP43YCR035C ENT1Q12518 454 aa9.74□□□□□ -0.85
RRP43YCR035C YEF3P16521 1044 aaKnown RBP9.72□□□□□ -0.85
RRP43YCR035C UBP10P53874 792 aaPredicted RBP9.72□□□□□ -0.85
RRP43YCR035C TAP42Q04372 366 aa9.72□□□□□ -0.85
RRP43YCR035C HIM1Q06674 414 aa9.72□□□□□ -0.85
RRP43YCR035C TRK1P12685 1235 aa9.71□□□□□ -0.86
RRP43YCR035C DPS1P04802 557 aaKnown RBP9.7□□□□□ -0.86
RRP43YCR035C KAR2P16474 682 aaKnown RBP9.7□□□□□ -0.86
RRP43YCR035C GRX4P32642 244 aa9.7□□□□□ -0.86
RRP43YCR035C MSB3P48566 633 aaPredicted RBP9.7□□□□□ -0.86
RRP43YCR035C ENV9Q08651 330 aa9.69□□□□□ -0.86
RRP43YCR035C ENP1P38333 483 aaKnown RBP9.68□□□□□ -0.86
RRP43YCR035C AI2P03876 854 aa9.67□□□□□ -0.86
RRP43YCR035C SLM3Q12093 417 aa9.67□□□□□ -0.86
RRP43YCR035C TY4B-HP0C2J7 1802 aa9.67□□□□□ -0.86
RRP43YCR035C TY4B-JP47024 1803 aa9.67□□□□□ -0.86
RRP43YCR035C AUS1Q08409 1394 aa9.66□□□□□ -0.86
RRP43YCR035C MGA2P40578 1113 aa9.65□□□□□ -0.86
RRP43YCR035C PAP2P53632 584 aaKnown RBP9.65□□□□□ -0.86
RRP43YCR035C TCB1Q12466 1186 aa9.65□□□□□ -0.86
RRP43YCR035C RRP5Q05022 1729 aaKnown RBP9.65□□□□□ -0.87
RRP43YCR035C MAP2P38174 421 aaKnown RBP9.64□□□□□ -0.87
RRP43YCR035C NSR1P27476 414 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
RRP43YCR035C BBC1P47068 1157 aa9.62□□□□□ -0.87
RRP43YCR035C EPS1P40557 701 aa9.61□□□□□ -0.87
RRP43YCR035C XKS1P42826 600 aa9.61□□□□□ -0.87
RRP43YCR035C SCY1P53009 804 aa9.61□□□□□ -0.87
RRP43YCR035C IMH1Q06704 911 aaKnown RBP9.61□□□□□ -0.87
RRP43YCR035C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
RRP43YCR035C IES2P40154 320 aa9.59□□□□□ -0.87
RRP43YCR035C RRP46P53256 223 aaPredicted RBP9.59□□□□□ -0.87
RRP43YCR035C RTR1P40084 226 aaPredicted RBP9.57□□□□□ -0.88
RRP43YCR035C IOC4Q04213 475 aa9.57□□□□□ -0.88
RRP43YCR035C RPO41P13433 1351 aaKnown RBP9.57□□□□□ -0.88
RRP43YCR035C YRF1-2P40105 1681 aa9.56□□□□□ -0.88
RRP43YCR035C RSF2P46974 1380 aa9.56□□□□□ -0.88
RRP43YCR035C RCR1P38212 213 aa9.55□□□□□ -0.88
RRP43YCR035C BDF1P35817 686 aa9.54□□□□□ -0.88
RRP43YCR035C AKL1P38080 1108 aaKnown RBP9.54□□□□□ -0.88
RRP43YCR035C DSD1P53095 428 aa9.54□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms