RNA–Protein interactions for RNA: YCL048W-A

YCL048W-A, Transcript of Putative protein of unknown function, yeastyeast

Gene YCL048W-A, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL048W-AYCL048W-A CPS1P27614 576 aa15.87■□□□□ 0.13
YCL048W-AYCL048W-A RCM1P53972 490 aa15.87■□□□□ 0.13
YCL048W-AYCL048W-A MLP1Q02455 1875 aaKnown RBP15.86■□□□□ 0.13
YCL048W-AYCL048W-A PDS5Q04264 1277 aa15.82■□□□□ 0.12
YCL048W-AYCL048W-A PPH3P32345 308 aa15.81■□□□□ 0.12
YCL048W-AYCL048W-A FKH1P40466 484 aa15.78■□□□□ 0.12
YCL048W-AYCL048W-A ADE6P38972 1358 aaKnown RBP15.75■□□□□ 0.11
YCL048W-AYCL048W-A YML133CQ03099 1374 aa15.75■□□□□ 0.11
YCL048W-AYCL048W-A YLL067CQ07888 1374 aa15.75■□□□□ 0.11
YCL048W-AYCL048W-A YLL066CQ99208 1374 aa15.75■□□□□ 0.11
YCL048W-AYCL048W-A MTR4P47047 1073 aaKnown RBP15.72■□□□□ 0.11
YCL048W-AYCL048W-A LEU2P04173 364 aaPredicted RBP15.71■□□□□ 0.11
YCL048W-AYCL048W-A TY4B-HP0C2J7 1802 aa15.7■□□□□ 0.1
YCL048W-AYCL048W-A TY4B-JP47024 1803 aa15.7■□□□□ 0.1
YCL048W-AYCL048W-A RTG3P38165 486 aa15.69■□□□□ 0.1
YCL048W-AYCL048W-A PTP3P40048 928 aa15.68■□□□□ 0.1
YCL048W-AYCL048W-A SPT7P35177 1332 aa15.68■□□□□ 0.1
YCL048W-AYCL048W-A PRP43P53131 767 aaKnown RBP15.65■□□□□ 0.1
YCL048W-AYCL048W-A PSD2P53037 1138 aaKnown RBP15.62■□□□□ 0.09
YCL048W-AYCL048W-A RRP5Q05022 1729 aaKnown RBP15.62■□□□□ 0.09
YCL048W-AYCL048W-A PDI1P17967 522 aaKnown RBP15.6■□□□□ 0.09
YCL048W-AYCL048W-A TAP42Q04372 366 aa15.58■□□□□ 0.08
YCL048W-AYCL048W-A RTF1P53064 558 aa15.56■□□□□ 0.08
YCL048W-AYCL048W-A CSE4P36012 229 aa15.55■□□□□ 0.08
YCL048W-AYCL048W-A ENP1P38333 483 aaKnown RBP15.55■□□□□ 0.08
YCL048W-AYCL048W-A GRX4P32642 244 aa15.54■□□□□ 0.08
YCL048W-AYCL048W-A RPS24AP0CX31 135 aaKnown RBP15.52■□□□□ 0.08
YCL048W-AYCL048W-A RPS24BP0CX32 135 aaKnown RBP15.52■□□□□ 0.08
YCL048W-AYCL048W-A NST1P53935 1240 aa15.52■□□□□ 0.08
YCL048W-AYCL048W-A IOC4Q04213 475 aa15.51■□□□□ 0.07
YCL048W-AYCL048W-A YAH1Q12184 172 aaKnown RBP15.5■□□□□ 0.07
YCL048W-AYCL048W-A YRF1-2P40105 1681 aa15.5■□□□□ 0.07
YCL048W-AYCL048W-A YEF3P16521 1044 aaKnown RBP15.49■□□□□ 0.07
YCL048W-AYCL048W-A PRP5P21372 849 aaPredicted RBP15.49■□□□□ 0.07
YCL048W-AYCL048W-A PRP45P28004 379 aaPredicted RBP15.49■□□□□ 0.07
YCL048W-AYCL048W-A AUS1Q08409 1394 aa15.48■□□□□ 0.07
YCL048W-AYCL048W-A KAR2P16474 682 aaKnown RBP15.46■□□□□ 0.07
YCL048W-AYCL048W-A LEU3P08638 886 aa15.45■□□□□ 0.06
YCL048W-AYCL048W-A YIL177CP40434 1758 aa15.44■□□□□ 0.06
YCL048W-AYCL048W-A YJL225CP40889 1758 aa15.44■□□□□ 0.06
YCL048W-AYCL048W-A REB1P21538 810 aa15.42■□□□□ 0.06
YCL048W-AYCL048W-A FKS3Q04952 1785 aa15.41■□□□□ 0.06
YCL048W-AYCL048W-A DPS1P04802 557 aaKnown RBP15.41■□□□□ 0.06
YCL048W-AYCL048W-A TRK1P12685 1235 aa15.41■□□□□ 0.06
YCL048W-AYCL048W-A SNF2P22082 1703 aa15.4■□□□□ 0.06
YCL048W-AYCL048W-A RPO41P13433 1351 aaKnown RBP15.39■□□□□ 0.05
YCL048W-AYCL048W-A HIM1Q06674 414 aa15.39■□□□□ 0.05
YCL048W-AYCL048W-A SLM3Q12093 417 aa15.39■□□□□ 0.05
YCL048W-AYCL048W-A URB1P34241 1764 aaKnown RBP15.39■□□□□ 0.05
YCL048W-AYCL048W-A MSB3P48566 633 aaPredicted RBP15.38■□□□□ 0.05
YCL048W-AYCL048W-A GAS4Q08271 471 aa15.38■□□□□ 0.05
YCL048W-AYCL048W-A ENT1Q12518 454 aa15.38■□□□□ 0.05
YCL048W-AYCL048W-A APC1P53886 1748 aa15.36■□□□□ 0.05
YCL048W-AYCL048W-A APP1P53933 587 aa15.34■□□□□ 0.05
YCL048W-AYCL048W-A TCB1Q12466 1186 aa15.34■□□□□ 0.05
YCL048W-AYCL048W-A RSF2P46974 1380 aa15.34■□□□□ 0.05
YCL048W-AYCL048W-A ENV9Q08651 330 aa15.32■□□□□ 0.04
YCL048W-AYCL048W-A NSR1P27476 414 aaKnown RBP RIP-Chip data15.3■□□□□ 0.04not detected
YCL048W-AYCL048W-A PAP2P53632 584 aaKnown RBP15.29■□□□□ 0.04
YCL048W-AYCL048W-A RPP0P05317 312 aaKnown RBP15.28■□□□□ 0.04
YCL048W-AYCL048W-A RRP46P53256 223 aaPredicted RBP15.26■□□□□ 0.03
YCL048W-AYCL048W-A SIR4P11978 1358 aa15.25■□□□□ 0.03
YCL048W-AYCL048W-A IMH1Q06704 911 aaKnown RBP15.25■□□□□ 0.03
YCL048W-AYCL048W-A XKS1P42826 600 aa15.24■□□□□ 0.03
YCL048W-AYCL048W-A RTR1P40084 226 aaPredicted RBP15.22■□□□□ 0.03
YCL048W-AYCL048W-A YRF1-3P0CX14 1859 aa15.22■□□□□ 0.03
YCL048W-AYCL048W-A YRF1-7P0CX15 1859 aa15.22■□□□□ 0.03
YCL048W-AYCL048W-A YRF1-6P53819 1859 aa15.22■□□□□ 0.03
YCL048W-AYCL048W-A IES2P40154 320 aa15.2■□□□□ 0.02
YCL048W-AYCL048W-A YRF1-4O13559 1382 aa15.2■□□□□ 0.02
YCL048W-AYCL048W-A AKL1P38080 1108 aaKnown RBP15.19■□□□□ 0.02
YCL048W-AYCL048W-A YIL055CP40523 627 aaKnown RBP15.19■□□□□ 0.02
YCL048W-AYCL048W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data15.19■□□□□ 0.02not detected
YCL048W-AYCL048W-A YDL144CQ07589 356 aa15.19■□□□□ 0.02
YCL048W-AYCL048W-A ROM2P51862 1356 aaKnown RBP15.19■□□□□ 0.02
YCL048W-AYCL048W-A VPS27P40343 622 aaKnown RBP15.18■□□□□ 0.02
YCL048W-AYCL048W-A DSD1P53095 428 aa15.18■□□□□ 0.02
YCL048W-AYCL048W-A CTF4Q01454 927 aa15.18■□□□□ 0.02
YCL048W-AYCL048W-A PRS1P32895 427 aaKnown RBP15.17■□□□□ 0.02
YCL048W-AYCL048W-A PRD1P25375 712 aa15.16■□□□□ 0.02
YCL048W-AYCL048W-A RCR1P38212 213 aa15.14■□□□□ 0.01
YCL048W-AYCL048W-A CDC45Q08032 650 aa15.14■□□□□ 0.01
YCL048W-AYCL048W-A MEC3Q02574 474 aa15.13■□□□□ 0.01
YCL048W-AYCL048W-A MPP10P47083 593 aaKnown RBP15.12■□□□□ 0.01
YCL048W-AYCL048W-A HSP104P31539 908 aaKnown RBP15.1■□□□□ 0.01
YCL048W-AYCL048W-A YKL133CP36066 463 aa15.09■□□□□ 0.01
YCL048W-AYCL048W-A YRB30P53107 440 aaPredicted RBP15.09■□□□□ 0.01
YCL048W-AYCL048W-A AOS1Q06624 347 aa15.08■□□□□ 0
YCL048W-AYCL048W-A EDE1P34216 1381 aa15.08■□□□□ 0
YCL048W-AYCL048W-A NTH2P35172 780 aa15.07■□□□□ 0
YCL048W-AYCL048W-A YNL050CP53952 270 aa15.07■□□□□ 0
YCL048W-AYCL048W-A THI22Q06490 572 aa15.07■□□□□ 0
YCL048W-AYCL048W-A INP54Q08227 384 aaKnown RBP15.05■□□□□ -0
YCL048W-AYCL048W-A DOT5P40553 215 aa15.03■□□□□ -0
YCL048W-AYCL048W-A ADE16P54113 591 aaKnown RBP15.03■□□□□ -0
YCL048W-AYCL048W-A SUI2P20459 304 aaKnown RBP15.02■□□□□ -0
YCL048W-AYCL048W-A SAP155P43612 1002 aa15.02■□□□□ -0
YCL048W-AYCL048W-A HEF3P53978 1044 aaKnown RBP15.02■□□□□ -0
YCL048W-AYCL048W-A NUP145P49687 1317 aa15.01□□□□□ -0.01
YCL048W-AYCL048W-A MAM1P40065 302 aa15.01□□□□□ -0.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms