RNA–Protein interactions for RNA: YBR183W

YPC1, Transcript of Alkaline ceramidase, yeastyeast

Gene YPC1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPC1YBR183W YLL066CQ99208 1374 aa9.76□□□□□ -0.85
YPC1YBR183W PSK1P31374 1356 aa9.75□□□□□ -0.85
YPC1YBR183W CHZ1P40019 153 aaPredicted RBP9.75□□□□□ -0.85
YPC1YBR183W PRY3P47033 881 aa9.75□□□□□ -0.85
YPC1YBR183W RIA1P53893 1110 aa9.75□□□□□ -0.85
YPC1YBR183W NST1P53935 1240 aa9.74□□□□□ -0.85
YPC1YBR183W RTG3P38165 486 aa9.73□□□□□ -0.85
YPC1YBR183W AAD16Q02895 342 aa9.73□□□□□ -0.85
YPC1YBR183W LEU3P08638 886 aa9.72□□□□□ -0.85
YPC1YBR183W PRS1P32895 427 aaKnown RBP9.7□□□□□ -0.86
YPC1YBR183W YNR029CP53729 429 aaKnown RBP9.7□□□□□ -0.86
YPC1YBR183W IOC4Q04213 475 aa9.69□□□□□ -0.86
YPC1YBR183W RCM1P53972 490 aa9.68□□□□□ -0.86
YPC1YBR183W PPH3P32345 308 aa9.67□□□□□ -0.86
YPC1YBR183W DIP2Q12220 943 aaPredicted RBP9.67□□□□□ -0.86
YPC1YBR183W SNF2P22082 1703 aa9.66□□□□□ -0.86
YPC1YBR183W CPS1P27614 576 aa9.66□□□□□ -0.86
YPC1YBR183W YEF3P16521 1044 aaKnown RBP9.65□□□□□ -0.86
YPC1YBR183W ISW2Q08773 1120 aa9.64□□□□□ -0.87
YPC1YBR183W TY4B-HP0C2J7 1802 aa9.63□□□□□ -0.87
YPC1YBR183W TY4B-JP47024 1803 aa9.63□□□□□ -0.87
YPC1YBR183W YMR196WQ04336 1088 aa9.62□□□□□ -0.87
YPC1YBR183W ADE6P38972 1358 aaKnown RBP9.62□□□□□ -0.87
YPC1YBR183W TRK1P12685 1235 aa9.6□□□□□ -0.87
YPC1YBR183W TAP42Q04372 366 aa9.6□□□□□ -0.87
YPC1YBR183W LEU2P04173 364 aaPredicted RBP9.59□□□□□ -0.87
YPC1YBR183W RPP0P05317 312 aaKnown RBP9.59□□□□□ -0.87
YPC1YBR183W MTR4P47047 1073 aaKnown RBP9.59□□□□□ -0.87
YPC1YBR183W RPG1P38249 964 aaKnown RBP9.58□□□□□ -0.88
YPC1YBR183W PDI1P17967 522 aaKnown RBP9.57□□□□□ -0.88
YPC1YBR183W NOP2P40991 618 aaKnown RBP9.57□□□□□ -0.88
YPC1YBR183W PRP43P53131 767 aaKnown RBP9.57□□□□□ -0.88
YPC1YBR183W AUS1Q08409 1394 aa9.57□□□□□ -0.88
YPC1YBR183W YIL177CP40434 1758 aa9.55□□□□□ -0.88
YPC1YBR183W YJL225CP40889 1758 aa9.55□□□□□ -0.88
YPC1YBR183W APC1P53886 1748 aa9.54□□□□□ -0.88
YPC1YBR183W THI12P42883 340 aa9.54□□□□□ -0.88
YPC1YBR183W THI5P43534 340 aa9.54□□□□□ -0.88
YPC1YBR183W THI11P47183 340 aa9.54□□□□□ -0.88
YPC1YBR183W THI13Q07748 340 aa9.54□□□□□ -0.88
YPC1YBR183W YRF1-2P40105 1681 aa9.53□□□□□ -0.88
YPC1YBR183W GRX4P32642 244 aa9.53□□□□□ -0.88
YPC1YBR183W VPS27P40343 622 aaKnown RBP9.53□□□□□ -0.88
YPC1YBR183W CDC45Q08032 650 aa9.52□□□□□ -0.89
YPC1YBR183W KAR2P16474 682 aaKnown RBP9.51□□□□□ -0.89
YPC1YBR183W RTF1P53064 558 aa9.51□□□□□ -0.89
YPC1YBR183W RRP46P53256 223 aaPredicted RBP9.51□□□□□ -0.89
YPC1YBR183W RRP5Q05022 1729 aaKnown RBP9.51□□□□□ -0.89
YPC1YBR183W YDL144CQ07589 356 aa9.5□□□□□ -0.89
YPC1YBR183W MIF2P35201 549 aa9.49□□□□□ -0.89
YPC1YBR183W HIM1Q06674 414 aa9.49□□□□□ -0.89
YPC1YBR183W RPO41P13433 1351 aaKnown RBP9.48□□□□□ -0.89
YPC1YBR183W FKS3Q04952 1785 aa9.47□□□□□ -0.89
YPC1YBR183W RPS24AP0CX31 135 aaKnown RBP9.47□□□□□ -0.89
YPC1YBR183W RPS24BP0CX32 135 aaKnown RBP9.47□□□□□ -0.89
YPC1YBR183W CSE4P36012 229 aa9.47□□□□□ -0.89
YPC1YBR183W URB1P34241 1764 aaKnown RBP9.47□□□□□ -0.89
YPC1YBR183W YRB30P53107 440 aaPredicted RBP9.46□□□□□ -0.9
YPC1YBR183W RTR1P40084 226 aaPredicted RBP9.45□□□□□ -0.9
YPC1YBR183W MPP10P47083 593 aaKnown RBP9.45□□□□□ -0.9
YPC1YBR183W RVB2Q12464 471 aaKnown RBP9.45□□□□□ -0.9
YPC1YBR183W SUI2P20459 304 aaKnown RBP9.44□□□□□ -0.9
YPC1YBR183W PRD1P25375 712 aa9.42□□□□□ -0.9
YPC1YBR183W YRF1-4O13559 1382 aa9.41□□□□□ -0.9
YPC1YBR183W DPS1P04802 557 aaKnown RBP9.41□□□□□ -0.9
YPC1YBR183W AVT3P36062 692 aa9.41□□□□□ -0.9
YPC1YBR183W PAP2P53632 584 aaKnown RBP9.41□□□□□ -0.9
YPC1YBR183W GAS4Q08271 471 aa9.41□□□□□ -0.9
YPC1YBR183W THI22Q06490 572 aa9.4□□□□□ -0.9
YPC1YBR183W PTP3P40048 928 aa9.39□□□□□ -0.91
YPC1YBR183W SAP155P43612 1002 aa9.39□□□□□ -0.91
YPC1YBR183W SIR4P11978 1358 aa9.38□□□□□ -0.91
YPC1YBR183W YCK3P39962 524 aa9.38□□□□□ -0.91
YPC1YBR183W HEF3P53978 1044 aaKnown RBP9.38□□□□□ -0.91
YPC1YBR183W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
YPC1YBR183W PRP5P21372 849 aaPredicted RBP9.35□□□□□ -0.91
YPC1YBR183W AKL1P38080 1108 aaKnown RBP9.35□□□□□ -0.91
YPC1YBR183W TPD3P31383 635 aa9.34□□□□□ -0.91
YPC1YBR183W SLM3Q12093 417 aa9.34□□□□□ -0.91
YPC1YBR183W TFA1P36100 482 aa9.33□□□□□ -0.92
YPC1YBR183W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
YPC1YBR183W RTT109Q07794 436 aa9.33□□□□□ -0.92
YPC1YBR183W PRP45P28004 379 aaPredicted RBP9.32□□□□□ -0.92
YPC1YBR183W FUN12P39730 1002 aaKnown RBP9.32□□□□□ -0.92
YPC1YBR183W DSD1P53095 428 aa9.32□□□□□ -0.92
YPC1YBR183W MSB3P48566 633 aaPredicted RBP9.31□□□□□ -0.92
YPC1YBR183W YRF1-3P0CX14 1859 aa9.3□□□□□ -0.92
YPC1YBR183W YRF1-7P0CX15 1859 aa9.3□□□□□ -0.92
YPC1YBR183W YRF1-6P53819 1859 aa9.3□□□□□ -0.92
YPC1YBR183W YNL050CP53952 270 aa9.3□□□□□ -0.92
YPC1YBR183W TSR3Q12094 313 aaKnown RBP9.3□□□□□ -0.92
YPC1YBR183W NTH2P35172 780 aa9.29□□□□□ -0.92
YPC1YBR183W RSF2P46974 1380 aa9.28□□□□□ -0.92
YPC1YBR183W YIL092WP40497 633 aa9.28□□□□□ -0.92
YPC1YBR183W CTF4Q01454 927 aa9.28□□□□□ -0.92
YPC1YBR183W BUD27P43573 796 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
YPC1YBR183W TCB1Q12466 1186 aa9.27□□□□□ -0.93
YPC1YBR183W EDE1P34216 1381 aa9.26□□□□□ -0.93
YPC1YBR183W RAD2P07276 1031 aa9.26□□□□□ -0.93
YPC1YBR183W MAK21Q12176 1025 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms