RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeastyeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSW1YBR148W TY1A-ER2P0CX66 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-GR3P0CX67 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-LR1P0CX68 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-MR2P0CX69 440 aa5.16□□□□□ -1.58
YSW1YBR148W RPP1BP10622 106 aaKnown RBP5.16□□□□□ -1.58
YSW1YBR148W NUD1P32336 851 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-JR2P47099 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-DR1Q03856 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-ML1Q04706 440 aaKnown RBP5.16□□□□□ -1.58
YSW1YBR148W TY1A-BRQ12217 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-NL2Q12470 440 aa5.16□□□□□ -1.58
YSW1YBR148W TY1A-GR2Q12485 440 aa5.16□□□□□ -1.58
YSW1YBR148W NIS1P53939 407 aa5.16□□□□□ -1.58
YSW1YBR148W SDH2P21801 266 aa5.13□□□□□ -1.59
YSW1YBR148W TEA1P47988 759 aa5.13□□□□□ -1.59
YSW1YBR148W KEX2P13134 814 aa5.12□□□□□ -1.59
YSW1YBR148W SIT4P20604 311 aa5.12□□□□□ -1.59
YSW1YBR148W SCJ1P25303 377 aa5.11□□□□□ -1.59
YSW1YBR148W KTR1P27810 393 aaKnown RBP5.11□□□□□ -1.59
YSW1YBR148W FPK1P53739 893 aa5.11□□□□□ -1.59
YSW1YBR148W AIM7Q12156 149 aa5.11□□□□□ -1.59
YSW1YBR148W ATF2P53296 535 aa5.1□□□□□ -1.59
YSW1YBR148W KIN1P13185 1064 aa5.09□□□□□ -1.59
YSW1YBR148W RPN1P38764 993 aaKnown RBP5.09□□□□□ -1.59
YSW1YBR148W AGE1Q04412 482 aa5.09□□□□□ -1.6
YSW1YBR148W TYW1Q08960 810 aaKnown RBP5.09□□□□□ -1.6
YSW1YBR148W TRK1P12685 1235 aa5.08□□□□□ -1.6
YSW1YBR148W CLB5P30283 435 aa5.08□□□□□ -1.6
YSW1YBR148W PRT1P06103 763 aaKnown RBP5.07□□□□□ -1.6
YSW1YBR148W GCD11P32481 527 aaKnown RBP5.07□□□□□ -1.6
YSW1YBR148W GUA1P38625 525 aaKnown RBP5.05□□□□□ -1.6
YSW1YBR148W AMS1P22855 1083 aa5.04□□□□□ -1.6
YSW1YBR148W HST2P53686 357 aa5.04□□□□□ -1.6
YSW1YBR148W YNL115CP53925 644 aa5.04□□□□□ -1.6
YSW1YBR148W NPL4P33755 580 aa5.04□□□□□ -1.6
YSW1YBR148W PAC1P39946 494 aaKnown RBP5.04□□□□□ -1.6
YSW1YBR148W YPL062WQ02781 134 aa5.04□□□□□ -1.6
YSW1YBR148W GYP1Q08484 637 aa5.04□□□□□ -1.6
YSW1YBR148W ESS1P22696 170 aa5.03□□□□□ -1.6
YSW1YBR148W YJU3P28321 313 aa5.03□□□□□ -1.6
YSW1YBR148W TUB4P53378 473 aa5.03□□□□□ -1.6
YSW1YBR148W LEO1P38439 464 aa5.02□□□□□ -1.61
YSW1YBR148W RRN7P40992 514 aa5.02□□□□□ -1.61
YSW1YBR148W RTF1P53064 558 aa5.02□□□□□ -1.61
YSW1YBR148W SLY41P22215 453 aa5.01□□□□□ -1.61
YSW1YBR148W CSN12P47130 423 aa5.01□□□□□ -1.61
YSW1YBR148W MMP1Q12372 583 aa5.01□□□□□ -1.61
YSW1YBR148W RSC30P38781 883 aa5□□□□□ -1.61
YSW1YBR148W SAS4Q04003 481 aa5□□□□□ -1.61
YSW1YBR148W YMR196WQ04336 1088 aa5□□□□□ -1.61
YSW1YBR148W GLN1P32288 370 aaKnown RBP4.99□□□□□ -1.61
YSW1YBR148W CST6P40535 587 aa4.99□□□□□ -1.61
YSW1YBR148W MOD5P07884 428 aa4.98□□□□□ -1.61
YSW1YBR148W TRM1P15565 570 aaKnown RBP4.96□□□□□ -1.62
YSW1YBR148W PKH3Q03306 898 aaPredicted RBP4.95□□□□□ -1.62
YSW1YBR148W SPT16P32558 1035 aaKnown RBP4.95□□□□□ -1.62
YSW1YBR148W CLA4P48562 842 aa4.95□□□□□ -1.62
YSW1YBR148W PKC1P24583 1151 aa4.94□□□□□ -1.62
YSW1YBR148W PUS6P53294 404 aa4.94□□□□□ -1.62
YSW1YBR148W LAM6Q08001 693 aa4.94□□□□□ -1.62
YSW1YBR148W PDC1P06169 563 aaKnown RBP4.93□□□□□ -1.62
YSW1YBR148W BDP1P46678 594 aa4.93□□□□□ -1.62
YSW1YBR148W RAD59Q12223 238 aa4.93□□□□□ -1.62
YSW1YBR148W YDL206WQ12424 762 aa4.93□□□□□ -1.62
YSW1YBR148W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
YSW1YBR148W TFB3Q03290 321 aa4.92□□□□□ -1.62
YSW1YBR148W MRF1P30775 413 aaPredicted RBP4.9□□□□□ -1.62
YSW1YBR148W HPC2Q01448 625 aa4.9□□□□□ -1.62
YSW1YBR148W FRK1Q03002 865 aaPredicted RBP4.9□□□□□ -1.62
YSW1YBR148W PUS5Q06244 254 aa4.9□□□□□ -1.62
YSW1YBR148W ERG12P07277 443 aa4.9□□□□□ -1.63
YSW1YBR148W ARG8P18544 423 aa4.9□□□□□ -1.63
YSW1YBR148W HXT10P43581 546 aa4.9□□□□□ -1.63
YSW1YBR148W YPR097WQ06839 1073 aa4.9□□□□□ -1.63
YSW1YBR148W AIR1P40507 360 aaKnown RBP4.89□□□□□ -1.63
YSW1YBR148W RPA14P50106 137 aa4.89□□□□□ -1.63
YSW1YBR148W DMA2P53924 522 aa4.89□□□□□ -1.63
YSW1YBR148W TPD3P31383 635 aa4.88□□□□□ -1.63
YSW1YBR148W ITT1Q04638 464 aa4.88□□□□□ -1.63
YSW1YBR148W SSA2P10592 639 aaKnown RBP4.88□□□□□ -1.63
YSW1YBR148W PAT1P25644 796 aaKnown RBP4.88□□□□□ -1.63
YSW1YBR148W YEL077CQ3E7X8 1277 aa4.88□□□□□ -1.63
YSW1YBR148W RRD1P40454 393 aaKnown RBP4.86□□□□□ -1.63
YSW1YBR148W KXD1P53158 218 aa4.86□□□□□ -1.63
YSW1YBR148W TBF1Q02457 562 aa4.86□□□□□ -1.63
YSW1YBR148W BRE2P43132 505 aa4.85□□□□□ -1.63
YSW1YBR148W ALR1Q08269 859 aa4.85□□□□□ -1.63
YSW1YBR148W GAR1P28007 205 aaKnown RBP4.84□□□□□ -1.63
YSW1YBR148W MAK16P10962 306 aaPredicted RBP4.83□□□□□ -1.64
YSW1YBR148W YDJ1P25491 409 aaKnown RBP4.83□□□□□ -1.64
YSW1YBR148W BIO2P32451 375 aa4.83□□□□□ -1.64
YSW1YBR148W FIG4P42837 879 aa4.83□□□□□ -1.64
YSW1YBR148W YPR084WQ06821 456 aa4.83□□□□□ -1.64
YSW1YBR148W MET32Q12041 191 aa4.83□□□□□ -1.64
YSW1YBR148W VAC17P25591 423 aa4.82□□□□□ -1.64
YSW1YBR148W HED1Q03937 162 aa4.81□□□□□ -1.64
YSW1YBR148W BRL1P38770 471 aa4.8□□□□□ -1.64
YSW1YBR148W YBL036CP38197 257 aa4.79□□□□□ -1.64
YSW1YBR148W BIM1P40013 344 aa4.79□□□□□ -1.64
YSW1YBR148W ATG32P40458 529 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms