RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C PRT1P06103 763 aaKnown RBP7.29□□□□□ -1.24
SHE3YBR130C GLC3P32775 704 aa7.29□□□□□ -1.24
SHE3YBR130C TUM1Q08686 304 aaKnown RBP7.29□□□□□ -1.24
SHE3YBR130C ISM1P48526 1002 aa7.28□□□□□ -1.24
SHE3YBR130C PSE1P32337 1089 aaKnown RBP7.27□□□□□ -1.25
SHE3YBR130C ATF2P53296 535 aa7.27□□□□□ -1.25
SHE3YBR130C NUD1P32336 851 aa7.26□□□□□ -1.25
SHE3YBR130C ERG12P07277 443 aa7.22□□□□□ -1.25
SHE3YBR130C NPL4P33755 580 aa7.22□□□□□ -1.25
SHE3YBR130C MVP1P40959 511 aaKnown RBP7.22□□□□□ -1.25
SHE3YBR130C TY1A-DR4O74302 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-HP0C2I4 478 aaKnown RBP7.21□□□□□ -1.26
SHE3YBR130C TY1A-AP0CX57 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-PR1P0CX58 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-ORP0CX59 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-PR2P0CX60 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-DR5P0CX65 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-ER2P0CX66 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-GR3P0CX67 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-LR1P0CX68 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-MR2P0CX69 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-JR2P47099 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-DR1Q03856 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-ML1Q04706 440 aaKnown RBP7.21□□□□□ -1.26
SHE3YBR130C TY1A-BRQ12217 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-NL2Q12470 440 aa7.21□□□□□ -1.26
SHE3YBR130C TY1A-GR2Q12485 440 aa7.21□□□□□ -1.26
SHE3YBR130C RGR1P19263 1082 aa7.19□□□□□ -1.26
SHE3YBR130C SEC2P17065 759 aa7.18□□□□□ -1.26
SHE3YBR130C CLB5P30283 435 aa7.17□□□□□ -1.26
SHE3YBR130C GCD11P32481 527 aaKnown RBP7.17□□□□□ -1.26
SHE3YBR130C YPR109WQ06104 294 aa7.17□□□□□ -1.26
SHE3YBR130C CST6P40535 587 aa7.16□□□□□ -1.26
SHE3YBR130C TEA1P47988 759 aa7.16□□□□□ -1.26
SHE3YBR130C SPT16P32558 1035 aaKnown RBP7.15□□□□□ -1.26
SHE3YBR130C GUA1P38625 525 aaKnown RBP7.15□□□□□ -1.26
SHE3YBR130C HPC2Q01448 625 aa7.15□□□□□ -1.26
SHE3YBR130C BRL1P38770 471 aa7.13□□□□□ -1.27
SHE3YBR130C SSA2P10592 639 aaKnown RBP7.12□□□□□ -1.27
SHE3YBR130C CLA4P48562 842 aa7.11□□□□□ -1.27
SHE3YBR130C PAT1P25644 796 aaKnown RBP7.1□□□□□ -1.27
SHE3YBR130C AIR1P40507 360 aaKnown RBP7.1□□□□□ -1.27
SHE3YBR130C GCR2Q01722 534 aa7.1□□□□□ -1.27
SHE3YBR130C ERF2Q06551 359 aa7.1□□□□□ -1.27
SHE3YBR130C LAM6Q08001 693 aa7.1□□□□□ -1.27
SHE3YBR130C RRN7P40992 514 aa7.09□□□□□ -1.27
SHE3YBR130C BRE2P43132 505 aa7.09□□□□□ -1.27
SHE3YBR130C KEX2P13134 814 aa7.07□□□□□ -1.28
SHE3YBR130C CSN12P47130 423 aa7.05□□□□□ -1.28
SHE3YBR130C FRK1Q03002 865 aaPredicted RBP7.05□□□□□ -1.28
SHE3YBR130C TFB3Q03290 321 aa7.05□□□□□ -1.28
SHE3YBR130C YMR196WQ04336 1088 aa7.04□□□□□ -1.28
SHE3YBR130C CDC4P07834 779 aa7.03□□□□□ -1.28
SHE3YBR130C BDP1P46678 594 aa7.03□□□□□ -1.28
SHE3YBR130C NIS1P53939 407 aa7.03□□□□□ -1.28
SHE3YBR130C YPL062WQ02781 134 aa7.03□□□□□ -1.28
SHE3YBR130C FPK1P53739 893 aa7.01□□□□□ -1.29
SHE3YBR130C GLN1P32288 370 aaKnown RBP7□□□□□ -1.29
SHE3YBR130C HST2P53686 357 aa7□□□□□ -1.29
SHE3YBR130C HED1Q03937 162 aa7□□□□□ -1.29
SHE3YBR130C SIT4P20604 311 aa6.99□□□□□ -1.29
SHE3YBR130C PAC1P39946 494 aaKnown RBP6.99□□□□□ -1.29
SHE3YBR130C AGE1Q04412 482 aa6.99□□□□□ -1.29
SHE3YBR130C RTF1P53064 558 aa6.97□□□□□ -1.29
SHE3YBR130C TYW1Q08960 810 aaKnown RBP6.97□□□□□ -1.29
SHE3YBR130C MMP1Q12372 583 aa6.97□□□□□ -1.29
SHE3YBR130C MOD5P07884 428 aa6.96□□□□□ -1.3
SHE3YBR130C KTR1P27810 393 aaKnown RBP6.96□□□□□ -1.3
SHE3YBR130C TUB4P53378 473 aa6.96□□□□□ -1.3
SHE3YBR130C GBP2P25555 427 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
SHE3YBR130C RPL34BP40525 121 aaKnown RBP6.95□□□□□ -1.3
SHE3YBR130C YNL115CP53925 644 aa6.95□□□□□ -1.3
SHE3YBR130C GAR1P28007 205 aaKnown RBP6.94□□□□□ -1.3
SHE3YBR130C YJL007CP47080 104 aa6.93□□□□□ -1.3
SHE3YBR130C SSA1P10591 642 aaKnown RBP6.92□□□□□ -1.3
SHE3YBR130C SLY41P22215 453 aa6.92□□□□□ -1.3
SHE3YBR130C ESS1P22696 170 aa6.92□□□□□ -1.3
SHE3YBR130C PKC1P24583 1151 aa6.92□□□□□ -1.3
SHE3YBR130C SCJ1P25303 377 aa6.92□□□□□ -1.3
SHE3YBR130C PKH3Q03306 898 aaPredicted RBP6.92□□□□□ -1.3
SHE3YBR130C BIM1P40013 344 aa6.91□□□□□ -1.3
SHE3YBR130C YBL036CP38197 257 aa6.9□□□□□ -1.3
SHE3YBR130C ENV9Q08651 330 aa6.9□□□□□ -1.3
SHE3YBR130C SSA4P22202 642 aaKnown RBP6.89□□□□□ -1.31
SHE3YBR130C MET22P32179 357 aa6.89□□□□□ -1.31
SHE3YBR130C PUS5Q06244 254 aa6.89□□□□□ -1.31
SHE3YBR130C GEF1P37020 779 aa6.88□□□□□ -1.31
SHE3YBR130C MET32Q12041 191 aa6.88□□□□□ -1.31
SHE3YBR130C RAD59Q12223 238 aa6.88□□□□□ -1.31
SHE3YBR130C AFT1P22149 690 aa6.87□□□□□ -1.31
SHE3YBR130C YJU3P28321 313 aa6.87□□□□□ -1.31
SHE3YBR130C ARG8P18544 423 aa6.86□□□□□ -1.31
SHE3YBR130C ATG32P40458 529 aa6.86□□□□□ -1.31
SHE3YBR130C HST3P53687 447 aa6.86□□□□□ -1.31
SHE3YBR130C SUB2Q07478 446 aaKnown RBP6.86□□□□□ -1.31
SHE3YBR130C ASH1P34233 588 aa6.85□□□□□ -1.31
SHE3YBR130C CSE4P36012 229 aa6.85□□□□□ -1.31
SHE3YBR130C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SHE3YBR130C PUS6P53294 404 aa6.85□□□□□ -1.31
SHE3YBR130C YDR444WQ04093 687 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms