RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	TIF1	P10081	395 aa	Known RBP	5.1	□□□□□ -1.59
RDH54	YBR073W	MAG2	Q06436	670 aa	Known RBP	5.1	□□□□□ -1.59
RDH54	YBR073W	TIF4632	P39936	914 aa	Known RBP	5.09	□□□□□ -1.59
RDH54	YBR073W	PSE1	P32337	1089 aa	Known RBP	5.09	□□□□□ -1.6
RDH54	YBR073W	RNH70	P53331	553 aa		5.09	□□□□□ -1.6
RDH54	YBR073W	GRX4	P32642	244 aa		5.08	□□□□□ -1.6
RDH54	YBR073W	YFR006W	P43590	535 aa		5.08	□□□□□ -1.6
RDH54	YBR073W	MPP10	P47083	593 aa	Known RBP	5.08	□□□□□ -1.6
RDH54	YBR073W	CSN12	P47130	423 aa		5.08	□□□□□ -1.6
RDH54	YBR073W	BIO2	P32451	375 aa		5.08	□□□□□ -1.6
RDH54	YBR073W	RPT2	P40327	437 aa	Known RBP	5.08	□□□□□ -1.6
RDH54	YBR073W	PSK2	Q08217	1101 aa		5.08	□□□□□ -1.6
RDH54	YBR073W	VHR2	P40041	505 aa		5.07	□□□□□ -1.6
RDH54	YBR073W	YJL007C	P47080	104 aa		5.07	□□□□□ -1.6
RDH54	YBR073W	MAP2	P38174	421 aa	Known RBP	5.07	□□□□□ -1.6
RDH54	YBR073W	DNM1	P54861	757 aa		5.07	□□□□□ -1.6
RDH54	YBR073W	YOL057W	Q08225	711 aa		5.07	□□□□□ -1.6
RDH54	YBR073W	SLD2	P34252	453 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	TTI1	P36097	1038 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	SOL3	P38858	249 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	NST1	P53935	1240 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
RDH54	YBR073W	ORC6	P38826	435 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	HOS4	P40480	1083 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	CEF1	Q03654	590 aa	Predicted RBP	5.06	□□□□□ -1.6
RDH54	YBR073W	SSF2	Q12153	453 aa	Predicted RBP	5.06	□□□□□ -1.6
RDH54	YBR073W	ATE1	P16639	503 aa		5.06	□□□□□ -1.6
RDH54	YBR073W	CIT2	P08679	460 aa		5.05	□□□□□ -1.6
RDH54	YBR073W	SSA4	P22202	642 aa	Known RBP	5.05	□□□□□ -1.6
RDH54	YBR073W	PWP2	P25635	923 aa	Known RBP	5.05	□□□□□ -1.6
RDH54	YBR073W	PPX1	P38698	397 aa		5.05	□□□□□ -1.6
RDH54	YBR073W	IPL1	P38991	367 aa		5.05	□□□□□ -1.6
RDH54	YBR073W	IOC3	P43596	787 aa		5.05	□□□□□ -1.6
RDH54	YBR073W	UBP10	P53874	792 aa	Predicted RBP	5.05	□□□□□ -1.6
RDH54	YBR073W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
RDH54	YBR073W	SEC20	P28791	383 aa		5.05	□□□□□ -1.6
RDH54	YBR073W	NMD3	P38861	518 aa	Known RBP	5.05	□□□□□ -1.6
RDH54	YBR073W	ENV11	P53246	860 aa		5.04	□□□□□ -1.6
RDH54	YBR073W	CPS1	P27614	576 aa		5.04	□□□□□ -1.6
RDH54	YBR073W	TLG1	Q03322	224 aa		5.04	□□□□□ -1.6
RDH54	YBR073W	SNU66	Q12420	587 aa	Predicted RBP	5.04	□□□□□ -1.6
RDH54	YBR073W	STB3	Q12427	513 aa		5.04	□□□□□ -1.6
RDH54	YBR073W	BUD6	P41697	788 aa		5.03	□□□□□ -1.6
RDH54	YBR073W	MAK16	P10962	306 aa	Predicted RBP	5.03	□□□□□ -1.6
RDH54	YBR073W	SVF1	Q05515	481 aa		5.03	□□□□□ -1.6
RDH54	YBR073W	VPS5	Q92331	675 aa		5.03	□□□□□ -1.6
RDH54	YBR073W	GAP1	P19145	602 aa	Predicted RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	SPT16	P32558	1035 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	GLO3	P38682	493 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	PKH1	Q03407	766 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	SSB1	P11484	613 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	PUP1	P25043	261 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	CDC3	P32457	520 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	STM1	P39015	273 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	SSB2	P40150	613 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	NNF1	P47149	201 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	YGR273C	P53329	174 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	TYW1	Q08960	810 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	SUP45	P12385	437 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	TSR4	P25040	408 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	RKM3	P38222	552 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	ALG12	P53730	551 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	YML083C	Q04526	418 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	TMA64	Q04600	565 aa	Known RBP	5.02	□□□□□ -1.61
RDH54	YBR073W	YOR238W	Q08634	303 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	YOL098C	Q12496	1037 aa		5.02	□□□□□ -1.61
RDH54	YBR073W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
RDH54	YBR073W	NKP1	Q12493	238 aa		5.01	□□□□□ -1.61
RDH54	YBR073W	FUI1	P38196	639 aa		5.01	□□□□□ -1.61
RDH54	YBR073W	PES4	P39684	611 aa		5.01	□□□□□ -1.61
RDH54	YBR073W	RGR1	P19263	1082 aa		5	□□□□□ -1.61
RDH54	YBR073W	ERP2	P39704	215 aa		5	□□□□□ -1.61
RDH54	YBR073W	VMA1	P17255	1071 aa	Known RBP	5	□□□□□ -1.61
RDH54	YBR073W	MEH1	Q02205	184 aa		5	□□□□□ -1.61
RDH54	YBR073W	MRX10	Q05648	414 aa		5	□□□□□ -1.61
RDH54	YBR073W	COG4	Q06096	861 aa		5	□□□□□ -1.61
RDH54	YBR073W	KOG1	P38873	1557 aa		4.99	□□□□□ -1.61
RDH54	YBR073W	GDE1	Q02979	1223 aa		4.99	□□□□□ -1.61
RDH54	YBR073W	VPS27	P40343	622 aa	Known RBP	4.99	□□□□□ -1.61
RDH54	YBR073W	NIS1	P53939	407 aa		4.99	□□□□□ -1.61
RDH54	YBR073W	YMR196W	Q04336	1088 aa		4.98	□□□□□ -1.61
RDH54	YBR073W	TY1B-A	O13527	1196 aa	Known RBP	4.98	□□□□□ -1.61
RDH54	YBR073W	GUT1	P32190	709 aa		4.98	□□□□□ -1.61
RDH54	YBR073W	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
RDH54	YBR073W	RTG2	P32608	588 aa	Known RBP	4.98	□□□□□ -1.61
RDH54	YBR073W	VPS24	P36095	224 aa	Known RBP	4.98	□□□□□ -1.61
RDH54	YBR073W	FPR3	P38911	411 aa	Known RBP	4.98	□□□□□ -1.61
RDH54	YBR073W	DNA2	P38859	1522 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	MAL31	P38156	614 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	TPS3	P38426	1054 aa	Known RBP	4.97	□□□□□ -1.61
RDH54	YBR073W	TAT2	P38967	592 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	TEA1	P47988	759 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	HST2	P53686	357 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	HAT1	Q12341	374 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	WHI5	Q12416	295 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	ERP4	Q12450	207 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	CDC11	P32458	415 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	ITT1	Q04638	464 aa		4.97	□□□□□ -1.61
RDH54	YBR073W	RRP14	P36080	434 aa	Known RBP	4.96	□□□□□ -1.62
RDH54	YBR073W	RSC30	P38781	883 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms