RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeastyeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA3YBL075C ORC1P54784 914 aaPredicted RBP17.86■□□□□ 0.45
SSA3YBL075C MHP1P43638 1398 aa17.85■□□□□ 0.45
SSA3YBL075C RAD9P14737 1309 aa17.85■□□□□ 0.45
SSA3YBL075C TAF5P38129 798 aa17.84■□□□□ 0.45
SSA3YBL075C ROX1P25042 368 aa17.83■□□□□ 0.44
SSA3YBL075C RPS0BP46654 252 aaKnown RBP17.83■□□□□ 0.44
SSA3YBL075C YFR006WP43590 535 aa17.82■□□□□ 0.44
SSA3YBL075C YGR130CP53278 816 aa17.81■□□□□ 0.44
SSA3YBL075C CAB1Q04430 367 aa17.8■□□□□ 0.44
SSA3YBL075C HAP1P0CE41 1502 aa17.78■□□□□ 0.44
SSA3YBL075C YIR014WP40570 242 aa17.77■□□□□ 0.43
SSA3YBL075C RLF2Q12495 606 aa17.76■□□□□ 0.43
SSA3YBL075C BCK1Q01389 1478 aa17.75■□□□□ 0.43
SSA3YBL075C RIA1P53893 1110 aa17.75■□□□□ 0.43
SSA3YBL075C CWC22P53333 577 aaKnown RBP17.71■□□□□ 0.43
SSA3YBL075C SLN1P39928 1220 aaPredicted RBP17.68■□□□□ 0.42
SSA3YBL075C MRX12P47084 519 aa17.68■□□□□ 0.42
SSA3YBL075C NOP53Q12080 455 aaKnown RBP17.66■□□□□ 0.42
SSA3YBL075C ALD4P46367 519 aaKnown RBP17.66■□□□□ 0.42
SSA3YBL075C TY1B-NL2Q99337 1749 aaKnown RBP17.65■□□□□ 0.42
SSA3YBL075C TAF8Q03750 510 aa17.63■□□□□ 0.41
SSA3YBL075C THI12P42883 340 aa17.62■□□□□ 0.41
SSA3YBL075C THI5P43534 340 aa17.62■□□□□ 0.41
SSA3YBL075C THI11P47183 340 aa17.62■□□□□ 0.41
SSA3YBL075C THI13Q07748 340 aa17.62■□□□□ 0.41
SSA3YBL075C KIP3P53086 805 aaKnown RBP17.6■□□□□ 0.41
SSA3YBL075C SPT21P35209 758 aa17.59■□□□□ 0.41
SSA3YBL075C ESL2P36168 1195 aa17.59■□□□□ 0.41
SSA3YBL075C CTR9P89105 1077 aa17.59■□□□□ 0.41
SSA3YBL075C DJP1P40564 432 aa17.58■□□□□ 0.4
SSA3YBL075C NOP58Q12499 511 aaKnown RBP17.57■□□□□ 0.4
SSA3YBL075C TY3B-IQ7LHG5 1498 aaKnown RBP17.54■□□□□ 0.4
SSA3YBL075C NAP1P25293 417 aaKnown RBP17.52■□□□□ 0.4
SSA3YBL075C YNR029CP53729 429 aaKnown RBP17.52■□□□□ 0.4
SSA3YBL075C PCT1P13259 424 aa17.51■□□□□ 0.39
SSA3YBL075C CDC45Q08032 650 aa17.51■□□□□ 0.39
SSA3YBL075C NUG1P40010 520 aaKnown RBP17.5■□□□□ 0.39
SSA3YBL075C EDE1P34216 1381 aa17.5■□□□□ 0.39
SSA3YBL075C NOT3P06102 836 aaKnown RBP17.49■□□□□ 0.39
SSA3YBL075C SPE2P21182 396 aa17.48■□□□□ 0.39
SSA3YBL075C RVB2Q12464 471 aaKnown RBP17.47■□□□□ 0.39
SSA3YBL075C RCM1P53972 490 aa17.46■□□□□ 0.39
SSA3YBL075C VPS27P40343 622 aaKnown RBP17.46■□□□□ 0.39
SSA3YBL075C RNA1P11745 407 aaKnown RBP17.45■□□□□ 0.38
SSA3YBL075C YPP1P46951 817 aa17.45■□□□□ 0.38
SSA3YBL075C ENV11P53246 860 aa17.45■□□□□ 0.38
SSA3YBL075C PDS5Q04264 1277 aa17.44■□□□□ 0.38
SSA3YBL075C YMR196WQ04336 1088 aa17.44■□□□□ 0.38
SSA3YBL075C RPP0P05317 312 aaKnown RBP17.43■□□□□ 0.38
SSA3YBL075C NST1P53935 1240 aa17.42■□□□□ 0.38
SSA3YBL075C MSP1P28737 362 aa17.42■□□□□ 0.38
SSA3YBL075C VPS24P36095 224 aaKnown RBP17.42■□□□□ 0.38
SSA3YBL075C PPH3P32345 308 aa17.4■□□□□ 0.38
SSA3YBL075C RIX1P38883 763 aaPredicted RBP17.4■□□□□ 0.38
SSA3YBL075C FPR4Q06205 392 aaPredicted RBP17.4■□□□□ 0.38
SSA3YBL075C YRB30P53107 440 aaPredicted RBP17.36■□□□□ 0.37
SSA3YBL075C KNS1P32350 737 aaPredicted RBP17.35■□□□□ 0.37
SSA3YBL075C ARL1P38116 183 aaKnown RBP17.35■□□□□ 0.37
SSA3YBL075C RAD26P40352 1085 aa17.33■□□□□ 0.36
SSA3YBL075C CHZ1P40019 153 aaPredicted RBP17.32■□□□□ 0.36
SSA3YBL075C TY4B-HP0C2J7 1802 aa17.31■□□□□ 0.36
SSA3YBL075C TY4B-JP47024 1803 aa17.31■□□□□ 0.36
SSA3YBL075C SMC3P47037 1230 aa17.29■□□□□ 0.36
SSA3YBL075C CPS1P27614 576 aa17.28■□□□□ 0.36
SSA3YBL075C DEF1P35732 738 aaKnown RBP17.26■□□□□ 0.35
SSA3YBL075C MLP1Q02455 1875 aaKnown RBP17.25■□□□□ 0.35
SSA3YBL075C YML133CQ03099 1374 aa17.23■□□□□ 0.35
SSA3YBL075C YLL067CQ07888 1374 aa17.23■□□□□ 0.35
SSA3YBL075C YLL066CQ99208 1374 aa17.23■□□□□ 0.35
SSA3YBL075C SPC110P32380 944 aa17.22■□□□□ 0.35
SSA3YBL075C LSP1Q12230 341 aaKnown RBP17.22■□□□□ 0.35
SSA3YBL075C RTG3P38165 486 aa17.2■□□□□ 0.34
SSA3YBL075C TEA1P47988 759 aa17.17■□□□□ 0.34
SSA3YBL075C PSK1P31374 1356 aa17.17■□□□□ 0.34
SSA3YBL075C DIP2Q12220 943 aaPredicted RBP17.17■□□□□ 0.34
SSA3YBL075C KRI1P42846 591 aaKnown RBP17.13■□□□□ 0.33
SSA3YBL075C YDL144CQ07589 356 aa17.13■□□□□ 0.33
SSA3YBL075C PTP3P40048 928 aa17.11■□□□□ 0.33
SSA3YBL075C APP1P53933 587 aa17.11■□□□□ 0.33
SSA3YBL075C YIL177CP40434 1758 aa17.11■□□□□ 0.33
SSA3YBL075C YJL225CP40889 1758 aa17.11■□□□□ 0.33
SSA3YBL075C RPN1P38764 993 aaKnown RBP17.11■□□□□ 0.33
SSA3YBL075C TPM2P40414 161 aa17.11■□□□□ 0.33
SSA3YBL075C RRP5Q05022 1729 aaKnown RBP17.11■□□□□ 0.33
SSA3YBL075C SUI2P20459 304 aaKnown RBP17.09■□□□□ 0.33
SSA3YBL075C NMD2P38798 1089 aaKnown RBP17.08■□□□□ 0.33
SSA3YBL075C FKH1P40466 484 aa17.08■□□□□ 0.32
SSA3YBL075C RPS24AP0CX31 135 aaKnown RBP17.07■□□□□ 0.32
SSA3YBL075C RPS24BP0CX32 135 aaKnown RBP17.07■□□□□ 0.32
SSA3YBL075C NAB6Q03735 1134 aaKnown RBP RIP-Chip data17.06■□□□□ 0.32not detected
SSA3YBL075C CLB5P30283 435 aa17.05■□□□□ 0.32
SSA3YBL075C CSE4P36012 229 aa17.04■□□□□ 0.32
SSA3YBL075C ADE6P38972 1358 aaKnown RBP17.04■□□□□ 0.32
SSA3YBL075C LCD1Q04377 747 aa17.04■□□□□ 0.32
SSA3YBL075C REB1P21538 810 aa17.02■□□□□ 0.32
SSA3YBL075C PRP45P28004 379 aaPredicted RBP17.02■□□□□ 0.32
SSA3YBL075C LEU2P04173 364 aaPredicted RBP17.02■□□□□ 0.31
SSA3YBL075C SWE1P32944 819 aa17.01■□□□□ 0.31
SSA3YBL075C ESC2Q06340 456 aa17.01■□□□□ 0.31
SSA3YBL075C RAD2P07276 1031 aa17■□□□□ 0.31
Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms