RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W GYP5Q12344 894 aa9.3□□□□□ -0.92
SPO7YAL009W DCW1P36091 449 aa9.28□□□□□ -0.92
SPO7YAL009W SAS10Q12136 610 aaPredicted RBP9.28□□□□□ -0.92
SPO7YAL009W MAK11P20484 414 aaKnown RBP9.27□□□□□ -0.93
SPO7YAL009W NUP170P38181 1502 aa9.26□□□□□ -0.93
SPO7YAL009W EDS1P38073 919 aa9.26□□□□□ -0.93
SPO7YAL009W PDR12Q02785 1511 aa9.25□□□□□ -0.93
SPO7YAL009W SPO14P36126 1683 aa9.24□□□□□ -0.93
SPO7YAL009W NUP157P40064 1391 aaKnown RBP9.24□□□□□ -0.93
SPO7YAL009W YNL035CP53962 389 aaKnown RBP9.23□□□□□ -0.93
SPO7YAL009W NCR1Q12200 1170 aa9.22□□□□□ -0.93
SPO7YAL009W ULS1Q08562 1619 aa9.21□□□□□ -0.93
SPO7YAL009W BMT6Q12291 365 aa9.2□□□□□ -0.94
SPO7YAL009W IQG1Q12280 1495 aa9.2□□□□□ -0.94
SPO7YAL009W IRC20Q06554 1556 aa9.2□□□□□ -0.94
SPO7YAL009W HTA1P04911 132 aaKnown RBP9.19□□□□□ -0.94
SPO7YAL009W HTA2P04912 132 aa9.19□□□□□ -0.94
SPO7YAL009W COQ8P27697 501 aa9.19□□□□□ -0.94
SPO7YAL009W PTC3P34221 468 aaKnown RBP9.18□□□□□ -0.94
SPO7YAL009W IFH1P39520 1085 aa9.18□□□□□ -0.94
SPO7YAL009W DAN4P47179 1161 aa9.18□□□□□ -0.94
SPO7YAL009W DNF2Q12675 1612 aa9.18□□□□□ -0.94
SPO7YAL009W PDR15Q04182 1529 aaKnown RBP9.17□□□□□ -0.94
SPO7YAL009W GDB1Q06625 1536 aa9.17□□□□□ -0.94
SPO7YAL009W SEC61P32915 480 aa9.16□□□□□ -0.94
SPO7YAL009W GRE2Q12068 342 aaKnown RBP9.16□□□□□ -0.94
SPO7YAL009W TAF7Q05021 590 aa9.15□□□□□ -0.94
SPO7YAL009W YEL023CP39992 682 aa9.14□□□□□ -0.95
SPO7YAL009W PDR10P51533 1564 aa9.13□□□□□ -0.95
SPO7YAL009W MLP2P40457 1679 aa9.12□□□□□ -0.95
SPO7YAL009W TRM3Q07527 1436 aa9.12□□□□□ -0.95
SPO7YAL009W ATH1P48016 1211 aa9.11□□□□□ -0.95
SPO7YAL009W JIP4Q03361 876 aa9.11□□□□□ -0.95
SPO7YAL009W PTC4P38089 393 aa9.09□□□□□ -0.95
SPO7YAL009W DOP1Q03921 1698 aa9.09□□□□□ -0.95
SPO7YAL009W GUT1P32190 709 aa9.07□□□□□ -0.96
SPO7YAL009W SAP30P38429 201 aa9.07□□□□□ -0.96
SPO7YAL009W GEA1P47102 1408 aaPredicted RBP9.06□□□□□ -0.96
SPO7YAL009W SOL3P38858 249 aa9.06□□□□□ -0.96
SPO7YAL009W TFG1P41895 735 aaPredicted RBP9.06□□□□□ -0.96
SPO7YAL009W BUD3P25558 1636 aa9.05□□□□□ -0.96
SPO7YAL009W NST1P53935 1240 aa9.04□□□□□ -0.96
SPO7YAL009W ARO1P08566 1588 aaKnown RBP9.03□□□□□ -0.96
SPO7YAL009W CKB1P43639 278 aa9.03□□□□□ -0.96
SPO7YAL009W CAT8P39113 1433 aa9.02□□□□□ -0.97
SPO7YAL009W YDL129WQ07555 291 aa9.01□□□□□ -0.97
SPO7YAL009W TY3B-GQ99315 1547 aa9□□□□□ -0.97
SPO7YAL009W YSP2Q06681 1438 aa9□□□□□ -0.97
SPO7YAL009W YDR344CQ05510 147 aa9□□□□□ -0.97
SPO7YAL009W PML39Q03760 334 aa8.99□□□□□ -0.97
SPO7YAL009W YAP3P38749 330 aa8.96□□□□□ -0.98
SPO7YAL009W BNR1P40450 1375 aa8.96□□□□□ -0.98
SPO7YAL009W YOR093CQ12275 1648 aa8.95□□□□□ -0.98
SPO7YAL009W ILV3P39522 585 aaKnown RBP8.95□□□□□ -0.98
SPO7YAL009W MID1P41821 548 aa8.94□□□□□ -0.98
SPO7YAL009W SET1P38827 1080 aaKnown RBP8.92□□□□□ -0.98
SPO7YAL009W CHC1P22137 1653 aaKnown RBP8.91□□□□□ -0.98
SPO7YAL009W MPH3P0CE00 602 aa8.9□□□□□ -0.98
SPO7YAL009W YGR273CP53329 174 aa8.9□□□□□ -0.98
SPO7YAL009W YBT1P32386 1661 aa8.89□□□□□ -0.99
SPO7YAL009W NOP53Q12080 455 aaKnown RBP8.89□□□□□ -0.99
SPO7YAL009W SEC7P11075 2009 aaKnown RBP8.88□□□□□ -0.99
SPO7YAL009W AI4P03878 556 aa8.86□□□□□ -0.99
SPO7YAL009W PRE3P38624 215 aa8.86□□□□□ -0.99
SPO7YAL009W MAK10Q02197 733 aa8.86□□□□□ -0.99
SPO7YAL009W DNF3Q12674 1656 aa8.85□□□□□ -0.99
SPO7YAL009W CHL1P22516 861 aaPredicted RBP8.84□□□□□ -0.99
SPO7YAL009W SRB8P25648 1427 aa8.83□□□□□ -1
SPO7YAL009W URN1Q06525 465 aaKnown RBP8.82□□□□□ -1
SPO7YAL009W ELP4Q02884 456 aaKnown RBP8.8□□□□□ -1
SPO7YAL009W BUD21Q08492 214 aaPredicted RBP8.79□□□□□ -1
SPO7YAL009W IPL1P38991 367 aa8.78□□□□□ -1
SPO7YAL009W PEX29Q03370 554 aa8.78□□□□□ -1
SPO7YAL009W TYS1P36421 394 aaKnown RBP8.76□□□□□ -1.01
SPO7YAL009W SLI15P38283 698 aa8.76□□□□□ -1.01
SPO7YAL009W KEX1P09620 729 aa8.75□□□□□ -1.01
SPO7YAL009W ARH1P48360 493 aa8.75□□□□□ -1.01
SPO7YAL009W BCK2P33306 851 aa8.74□□□□□ -1.01
SPO7YAL009W VHR2P40041 505 aa8.74□□□□□ -1.01
SPO7YAL009W UBP14P38237 781 aaKnown RBP8.72□□□□□ -1.01
SPO7YAL009W YLR326WQ06170 240 aaKnown RBP8.72□□□□□ -1.01
SPO7YAL009W MPC54Q08550 464 aa8.72□□□□□ -1.01
SPO7YAL009W VRP1P37370 817 aa8.69□□□□□ -1.02
SPO7YAL009W HAP5Q02516 242 aa8.67□□□□□ -1.02
SPO7YAL009W IKI3Q06706 1349 aaKnown RBP8.66□□□□□ -1.02
SPO7YAL009W THI12P42883 340 aa8.66□□□□□ -1.02
SPO7YAL009W THI5P43534 340 aa8.66□□□□□ -1.02
SPO7YAL009W THI11P47183 340 aa8.66□□□□□ -1.02
SPO7YAL009W NMA111P53920 997 aa8.66□□□□□ -1.02
SPO7YAL009W THI13Q07748 340 aa8.66□□□□□ -1.02
SPO7YAL009W PCS60P38137 543 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
SPO7YAL009W CDC73Q06697 393 aa8.65□□□□□ -1.02
SPO7YAL009W PDR5P33302 1511 aaKnown RBP8.64□□□□□ -1.03
SPO7YAL009W SSM4P40318 1319 aa8.64□□□□□ -1.03
SPO7YAL009W YMR196WQ04336 1088 aa8.64□□□□□ -1.03
SPO7YAL009W SPT23P35210 1082 aa8.63□□□□□ -1.03
SPO7YAL009W DPL1Q05567 589 aa8.63□□□□□ -1.03
SPO7YAL009W VMR1P38735 1592 aa8.63□□□□□ -1.03
SPO7YAL009W NUP188P52593 1655 aaKnown RBP8.62□□□□□ -1.03
SPO7YAL009W IML1P47170 1584 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms