RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MIA2Q96PC5 1412 aa14.13□□□□□ -0.15
SCARB2-225ENST00000640900 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
SCARB2-225ENST00000640900 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
SCARB2-225ENST00000640900 CD109Q6YHK3 1445 aa14.11□□□□□ -0.15
SCARB2-225ENST00000640900 RRBP1Q9P2E9 1410 aaKnown RBP14.11□□□□□ -0.15
SCARB2-225ENST00000640900 CDC42BPBQ9Y5S2 1711 aa14.11□□□□□ -0.15
SCARB2-225ENST00000640900 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
SCARB2-225ENST00000640900 FGD6Q6ZV73 1430 aa14.1□□□□□ -0.15
SCARB2-225ENST00000640900 FAM69CQ0P6D2 419 aa14.1□□□□□ -0.15
SCARB2-225ENST00000640900 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
SCARB2-225ENST00000640900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.09□□□□□ -0.15
SCARB2-225ENST00000640900 TCOF1Q13428 1488 aaKnown RBP14.09□□□□□ -0.15
SCARB2-225ENST00000640900 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
SCARB2-225ENST00000640900 ITSN2Q9NZM3 1697 aa14.09□□□□□ -0.15
SCARB2-225ENST00000640900 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
SCARB2-225ENST00000640900 NEO1Q92859 1461 aa14.06□□□□□ -0.16
SCARB2-225ENST00000640900 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-225ENST00000640900 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
SCARB2-225ENST00000640900 FANCAO15360 1455 aa14.04□□□□□ -0.16
SCARB2-225ENST00000640900 SAMD9LQ8IVG5 1584 aa14.04□□□□□ -0.16
SCARB2-225ENST00000640900 PTPN23Q9H3S7 1636 aa14.04□□□□□ -0.16
SCARB2-225ENST00000640900 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
SCARB2-225ENST00000640900 MBD5Q9P267 1494 aa14.03□□□□□ -0.16
SCARB2-225ENST00000640900 ARHGAP5Q13017 1502 aa14.03□□□□□ -0.16
SCARB2-225ENST00000640900 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
SCARB2-225ENST00000640900 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
SCARB2-225ENST00000640900 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 ABCC1P33527 1531 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 ARHGEF12Q9NZN5 1544 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 TEX14Q8IWB6 1497 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 AKNAQ7Z591 1439 aa14.01□□□□□ -0.17
SCARB2-225ENST00000640900 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
SCARB2-225ENST00000640900 TSPOAP1O95153 1857 aa13.97□□□□□ -0.17
SCARB2-225ENST00000640900 ADGRL1O94910 1474 aa13.96□□□□□ -0.17
SCARB2-225ENST00000640900 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
SCARB2-225ENST00000640900 RSPH4AQ5TD94 716 aa13.96□□□□□ -0.17
SCARB2-225ENST00000640900 DNMT1P26358 1616 aaKnown RBP13.96□□□□□ -0.17
SCARB2-225ENST00000640900 ABCC5O15440 1437 aa13.96□□□□□ -0.18
SCARB2-225ENST00000640900 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
SCARB2-225ENST00000640900 COL17A1Q9UMD9 1497 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-225ENST00000640900 SCAPERQ9BY12 1400 aa13.95□□□□□ -0.18
SCARB2-225ENST00000640900 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
SCARB2-225ENST00000640900 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
SCARB2-225ENST00000640900 POGZQ7Z3K3 1410 aa13.94□□□□□ -0.18
SCARB2-225ENST00000640900 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
SCARB2-225ENST00000640900 KDM5CP41229 1560 aa13.93□□□□□ -0.18
SCARB2-225ENST00000640900 DAPK1P53355 1430 aa13.93□□□□□ -0.18
SCARB2-225ENST00000640900 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCARB2-225ENST00000640900 TRIM26Q12899 539 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-225ENST00000640900 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-225ENST00000640900 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
SCARB2-225ENST00000640900 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
SCARB2-225ENST00000640900 RICTORQ6R327 1708 aa13.92□□□□□ -0.18
SCARB2-225ENST00000640900 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
SCARB2-225ENST00000640900 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
SCARB2-225ENST00000640900 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
SCARB2-225ENST00000640900 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
SCARB2-225ENST00000640900 CROCC2H7BZ55 1655 aa13.91□□□□□ -0.18
SCARB2-225ENST00000640900 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
SCARB2-225ENST00000640900 ZMYM4Q5VZL5 1548 aa13.9□□□□□ -0.18
SCARB2-225ENST00000640900 ADGRL2O95490 1459 aa13.9□□□□□ -0.18
SCARB2-225ENST00000640900 MLH3Q9UHC1 1453 aa13.89□□□□□ -0.19
SCARB2-225ENST00000640900 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
SCARB2-225ENST00000640900 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
SCARB2-225ENST00000640900 INO80Q9ULG1 1556 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-225ENST00000640900 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
SCARB2-225ENST00000640900 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
SCARB2-225ENST00000640900 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
SCARB2-225ENST00000640900 C9orf84Q5VXU9 1444 aa13.86□□□□□ -0.19
SCARB2-225ENST00000640900 MAGI2Q86UL8 1455 aa13.86□□□□□ -0.19
SCARB2-225ENST00000640900 KIDINS220Q9ULH0 1771 aa13.85□□□□□ -0.19
SCARB2-225ENST00000640900 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
SCARB2-225ENST00000640900 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
SCARB2-225ENST00000640900 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
SCARB2-225ENST00000640900 ATP7AQ04656 1500 aa13.83□□□□□ -0.2
SCARB2-225ENST00000640900 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
SCARB2-225ENST00000640900 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
SCARB2-225ENST00000640900 KDM6BO15054 1643 aa13.82□□□□□ -0.2
SCARB2-225ENST00000640900 ADGBQ8N7X0 1667 aa13.82□□□□□ -0.2
SCARB2-225ENST00000640900 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
SCARB2-225ENST00000640900 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
SCARB2-225ENST00000640900 NAIPQ13075 1403 aa13.81□□□□□ -0.2
SCARB2-225ENST00000640900 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
SCARB2-225ENST00000640900 YEATS2Q9ULM3 1422 aa13.79□□□□□ -0.2
SCARB2-225ENST00000640900 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
SCARB2-225ENST00000640900 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
SCARB2-225ENST00000640900 DIP2CQ9Y2E4 1556 aa13.78□□□□□ -0.2
SCARB2-225ENST00000640900 ABCA6Q8N139 1617 aa13.78□□□□□ -0.2
SCARB2-225ENST00000640900 ITGAEP38570 1179 aa13.77□□□□□ -0.21
SCARB2-225ENST00000640900 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.21
SCARB2-225ENST00000640900 KIF15Q9NS87 1388 aa13.77□□□□□ -0.21
SCARB2-225ENST00000640900 GCC2Q8IWJ2 1684 aa13.76□□□□□ -0.21
SCARB2-225ENST00000640900 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
SCARB2-225ENST00000640900 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
SCARB2-225ENST00000640900 HRCP23327 699 aa13.76□□□□□ -0.21
SCARB2-225ENST00000640900 ATP10AO60312 1499 aa13.75□□□□□ -0.21
SCARB2-225ENST00000640900 ERBINQ96RT1 1412 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
SCARB2-225ENST00000640900 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms