RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 SNAPC4Q5SXM2 1469 aa10.47□□□□□ -0.73
NECAP1-221ENST00000639955 KDM6BO15054 1643 aa10.47□□□□□ -0.73
NECAP1-221ENST00000639955 PRDM2Q13029 1718 aa10.47□□□□□ -0.73
NECAP1-221ENST00000639955 CARD11Q9BXL7 1154 aa10.46□□□□□ -0.73
NECAP1-221ENST00000639955 MAP3K1Q13233 1512 aa10.46□□□□□ -0.73
NECAP1-221ENST00000639955 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.73
NECAP1-221ENST00000639955 AKNAQ7Z591 1439 aa10.46□□□□□ -0.74
NECAP1-221ENST00000639955 CCDC7Q96M83 1385 aa10.46□□□□□ -0.74
NECAP1-221ENST00000639955 DCAF11Q8TEB1 546 aa10.46□□□□□ -0.74
NECAP1-221ENST00000639955 PPP4R2Q9NY27 417 aa10.46□□□□□ -0.74
NECAP1-221ENST00000639955 EFCAB5A4FU69 1503 aa10.45□□□□□ -0.74
NECAP1-221ENST00000639955 PLEKHG5O94827 1062 aa10.44□□□□□ -0.74
NECAP1-221ENST00000639955 MYT1LQ9UL68 1186 aa10.44□□□□□ -0.74
NECAP1-221ENST00000639955 CC2D1BQ5T0F9 858 aaKnown RBP10.43□□□□□ -0.74
NECAP1-221ENST00000639955 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
NECAP1-221ENST00000639955 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
NECAP1-221ENST00000639955 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
NECAP1-221ENST00000639955 THOC2Q8NI27 1593 aaKnown RBP10.42□□□□□ -0.74
NECAP1-221ENST00000639955 CTTNBP2Q8WZ74 1663 aa10.42□□□□□ -0.74
NECAP1-221ENST00000639955 SUPT6HQ7KZ85 1726 aaKnown RBP10.42□□□□□ -0.74
NECAP1-221ENST00000639955 ST20-MTHFSA0A0A6YYL1 179 aa10.42□□□□□ -0.74
NECAP1-221ENST00000639955 PRG4Q92954 1404 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-221ENST00000639955 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
NECAP1-221ENST00000639955 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
NECAP1-221ENST00000639955 EPRSP07814 1512 aaKnown RBP10.4□□□□□ -0.74
NECAP1-221ENST00000639955 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.75
NECAP1-221ENST00000639955 NUP155O75694 1391 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 USP47Q96K76 1375 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
NECAP1-221ENST00000639955 LRRIQ1Q96JM4 1722 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 PLIN1O60240 522 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 TSPY4P0CV99 314 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 TSPY10P0CW01 314 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 EHBP1L1Q8N3D4 1523 aa10.39□□□□□ -0.75
NECAP1-221ENST00000639955 CUL7Q14999 1698 aa10.38□□□□□ -0.75
NECAP1-221ENST00000639955 PLEKHD1A6NEE1 506 aa10.37□□□□□ -0.75
NECAP1-221ENST00000639955 LAS1LQ9Y4W2 734 aaKnown RBP10.37□□□□□ -0.75
NECAP1-221ENST00000639955 DENND4BO75064 1496 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-221ENST00000639955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.36□□□□□ -0.75
NECAP1-221ENST00000639955 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
NECAP1-221ENST00000639955 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
NECAP1-221ENST00000639955 UGGT2Q9NYU1 1516 aa10.36□□□□□ -0.75
NECAP1-221ENST00000639955 DAPK1P53355 1430 aa10.35□□□□□ -0.75
NECAP1-221ENST00000639955 ANKRD30BQ9BXX2 1392 aa10.35□□□□□ -0.75
NECAP1-221ENST00000639955 ABCC5O15440 1437 aa10.35□□□□□ -0.75
NECAP1-221ENST00000639955 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
NECAP1-221ENST00000639955 PLB1Q6P1J6 1458 aa10.34□□□□□ -0.75
NECAP1-221ENST00000639955 ANP32AP39687 249 aaKnown RBP10.34□□□□□ -0.75
NECAP1-221ENST00000639955 EXOC6Q8TAG9 804 aa10.34□□□□□ -0.75
NECAP1-221ENST00000639955 NBPF1Q3BBV0 1214 aa10.34□□□□□ -0.75
NECAP1-221ENST00000639955 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
NECAP1-221ENST00000639955 NUDCQ9Y266 331 aa10.33□□□□□ -0.76
NECAP1-221ENST00000639955 KDM5BQ9UGL1 1544 aa10.33□□□□□ -0.76
NECAP1-221ENST00000639955 JPH4Q96JJ6 628 aa10.32□□□□□ -0.76
NECAP1-221ENST00000639955 IQGAP2Q13576 1575 aa10.32□□□□□ -0.76
NECAP1-221ENST00000639955 NCOA1Q15788 1441 aa10.32□□□□□ -0.76
NECAP1-221ENST00000639955 NOP58Q9Y2X3 529 aaKnown RBP10.32□□□□□ -0.76
NECAP1-221ENST00000639955 DEKP35659 375 aaKnown RBP10.32□□□□□ -0.76
NECAP1-221ENST00000639955 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
NECAP1-221ENST00000639955 RTL5Q5HYW3 569 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-221ENST00000639955 HECW1Q76N89 1606 aa10.31□□□□□ -0.76
NECAP1-221ENST00000639955 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
NECAP1-221ENST00000639955 SAMD9Q5K651 1589 aa10.29□□□□□ -0.76
NECAP1-221ENST00000639955 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-221ENST00000639955 RPRD2Q5VT52 1461 aaKnown RBP10.29□□□□□ -0.76
NECAP1-221ENST00000639955 ABCA5Q8WWZ7 1642 aa10.28□□□□□ -0.76
NECAP1-221ENST00000639955 ANKRD30AQ9BXX3 1397 aa10.28□□□□□ -0.76
NECAP1-221ENST00000639955 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
NECAP1-221ENST00000639955 ANKRD50Q9ULJ7 1429 aa10.28□□□□□ -0.76
NECAP1-221ENST00000639955 FANCIQ9NVI1 1328 aa10.27□□□□□ -0.76
NECAP1-221ENST00000639955 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-221ENST00000639955 PNISRQ8TF01 805 aaKnown RBP10.27□□□□□ -0.76
NECAP1-221ENST00000639955 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
NECAP1-221ENST00000639955 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
NECAP1-221ENST00000639955 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
NECAP1-221ENST00000639955 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
NECAP1-221ENST00000639955 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
NECAP1-221ENST00000639955 RCAN3Q9UKA8 241 aa10.26□□□□□ -0.77
NECAP1-221ENST00000639955 CCDC146Q8IYE0 955 aa10.26□□□□□ -0.77
NECAP1-221ENST00000639955 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
NECAP1-221ENST00000639955 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 ARHGEF11O15085 1522 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 RGS3P49796 1198 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 PANK3Q9H999 370 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 TEX14Q8IWB6 1497 aa10.25□□□□□ -0.77
NECAP1-221ENST00000639955 WDR62O43379 1518 aa10.24□□□□□ -0.77
NECAP1-221ENST00000639955 KIF15Q9NS87 1388 aa10.24□□□□□ -0.77
NECAP1-221ENST00000639955 KIAA1107Q9UPP5 1409 aa10.23□□□□□ -0.77
NECAP1-221ENST00000639955 DHX29Q7Z478 1369 aaKnown RBP10.23□□□□□ -0.77
NECAP1-221ENST00000639955 RRP1P56182 461 aaKnown RBP10.23□□□□□ -0.77
NECAP1-221ENST00000639955 PZPP20742 1482 aa10.22□□□□□ -0.77
NECAP1-221ENST00000639955 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
NECAP1-221ENST00000639955 TROQ12816 1431 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-221ENST00000639955 CRBNQ96SW2 442 aa10.21□□□□□ -0.77
NECAP1-221ENST00000639955 KIF14Q15058 1648 aa10.21□□□□□ -0.77
NECAP1-221ENST00000639955 C20orf194Q5TEA3 1177 aa10.21□□□□□ -0.77
NECAP1-221ENST00000639955 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.77
NECAP1-221ENST00000639955 ARXQ96QS3 562 aa10.21□□□□□ -0.78
NECAP1-221ENST00000639955 GCC2Q8IWJ2 1684 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms