RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 MYO5CQ9NQX4 1742 aa17.79■□□□□ 0.44
PAX6-250ENST00000639054 MAPKBP1O60336 1514 aa17.79■□□□□ 0.44
PAX6-250ENST00000639054 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
PAX6-250ENST00000639054 CAMSAP2Q08AD1 1489 aa17.79■□□□□ 0.44
PAX6-250ENST00000639054 ARHGAP5Q13017 1502 aa17.78■□□□□ 0.44
PAX6-250ENST00000639054 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
PAX6-250ENST00000639054 PLCH2O75038 1416 aa17.77■□□□□ 0.43
PAX6-250ENST00000639054 CHIC2Q9UKJ5 165 aa17.75■□□□□ 0.43
PAX6-250ENST00000639054 SAMD9LQ8IVG5 1584 aa17.75■□□□□ 0.43
PAX6-250ENST00000639054 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
PAX6-250ENST00000639054 ABCC5O15440 1437 aa17.72■□□□□ 0.43
PAX6-250ENST00000639054 DAPK1P53355 1430 aa17.71■□□□□ 0.43
PAX6-250ENST00000639054 EFCAB2Q5VUJ9 269 aa17.71■□□□□ 0.43
PAX6-250ENST00000639054 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
PAX6-250ENST00000639054 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
PAX6-250ENST00000639054 DNMT1P26358 1616 aaKnown RBP17.7■□□□□ 0.42
PAX6-250ENST00000639054 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
PAX6-250ENST00000639054 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
PAX6-250ENST00000639054 DIP2BQ9P265 1576 aa17.68■□□□□ 0.42
PAX6-250ENST00000639054 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
PAX6-250ENST00000639054 FANCAO15360 1455 aa17.67■□□□□ 0.42
PAX6-250ENST00000639054 MBD5Q9P267 1494 aa17.67■□□□□ 0.42
PAX6-250ENST00000639054 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
PAX6-250ENST00000639054 GLI2P10070 1586 aa17.64■□□□□ 0.41
PAX6-250ENST00000639054 MAP3K4Q9Y6R4 1608 aa17.64■□□□□ 0.41
PAX6-250ENST00000639054 SETD5Q9C0A6 1442 aa17.63■□□□□ 0.41
PAX6-250ENST00000639054 CROCC2H7BZ55 1655 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 ABCC1P33527 1531 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
PAX6-250ENST00000639054 ARHGEF5Q12774 1597 aa17.61■□□□□ 0.41
PAX6-250ENST00000639054 KIF13AQ9H1H9 1805 aa17.61■□□□□ 0.41
PAX6-250ENST00000639054 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
PAX6-250ENST00000639054 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 NAIPQ13075 1403 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 PLEKHH2Q8IVE3 1493 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
PAX6-250ENST00000639054 SCAPERQ9BY12 1400 aa17.59■□□□□ 0.41
PAX6-250ENST00000639054 HFM1A2PYH4 1435 aa17.59■□□□□ 0.41
PAX6-250ENST00000639054 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
PAX6-250ENST00000639054 KDM6BO15054 1643 aa17.56■□□□□ 0.4
PAX6-250ENST00000639054 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
PAX6-250ENST00000639054 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
PAX6-250ENST00000639054 ROCK1Q13464 1354 aa17.55■□□□□ 0.4
PAX6-250ENST00000639054 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
PAX6-250ENST00000639054 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
PAX6-250ENST00000639054 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
PAX6-250ENST00000639054 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
PAX6-250ENST00000639054 ADGRL2O95490 1459 aa17.54■□□□□ 0.4
PAX6-250ENST00000639054 CFAP74Q9C0B2 1584 aa17.53■□□□□ 0.4
PAX6-250ENST00000639054 GCC2Q8IWJ2 1684 aa17.53■□□□□ 0.4
PAX6-250ENST00000639054 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
PAX6-250ENST00000639054 NEO1Q92859 1461 aa17.52■□□□□ 0.4
PAX6-250ENST00000639054 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
PAX6-250ENST00000639054 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
PAX6-250ENST00000639054 SPAG9O60271 1321 aaKnown RBP17.51■□□□□ 0.39
PAX6-250ENST00000639054 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
PAX6-250ENST00000639054 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
PAX6-250ENST00000639054 MYT1LQ9UL68 1186 aa17.49■□□□□ 0.39
PAX6-250ENST00000639054 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
PAX6-250ENST00000639054 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
PAX6-250ENST00000639054 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
PAX6-250ENST00000639054 HRCP23327 699 aa17.46■□□□□ 0.39
PAX6-250ENST00000639054 ZNF518AQ6AHZ1 1483 aa17.45■□□□□ 0.38
PAX6-250ENST00000639054 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
PAX6-250ENST00000639054 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
PAX6-250ENST00000639054 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
PAX6-250ENST00000639054 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
PAX6-250ENST00000639054 ATP7AQ04656 1500 aa17.44■□□□□ 0.38
PAX6-250ENST00000639054 INO80Q9ULG1 1556 aaPredicted RBP17.43■□□□□ 0.38
PAX6-250ENST00000639054 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
PAX6-250ENST00000639054 RTEL1-TNFRSF6BF6WH68 1400 aa17.43■□□□□ 0.38
PAX6-250ENST00000639054 KIDINS220Q9ULH0 1771 aa17.42■□□□□ 0.38
PAX6-250ENST00000639054 RICTORQ6R327 1708 aa17.42■□□□□ 0.38
PAX6-250ENST00000639054 KDM5CP41229 1560 aa17.42■□□□□ 0.38
PAX6-250ENST00000639054 COL17A1Q9UMD9 1497 aaPredicted RBP17.41■□□□□ 0.38
PAX6-250ENST00000639054 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
PAX6-250ENST00000639054 HECW2Q9P2P5 1572 aa17.38■□□□□ 0.37
PAX6-250ENST00000639054 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
PAX6-250ENST00000639054 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
PAX6-250ENST00000639054 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
PAX6-250ENST00000639054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
PAX6-250ENST00000639054 ABCA6Q8N139 1617 aa17.34■□□□□ 0.37
PAX6-250ENST00000639054 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
PAX6-250ENST00000639054 FOXD1Q16676 465 aa17.33■□□□□ 0.37
PAX6-250ENST00000639054 NUP155O75694 1391 aa17.33■□□□□ 0.36
PAX6-250ENST00000639054 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
PAX6-250ENST00000639054 ERBINQ96RT1 1412 aa17.32■□□□□ 0.36
PAX6-250ENST00000639054 PZPP20742 1482 aa17.31■□□□□ 0.36
PAX6-250ENST00000639054 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
PAX6-250ENST00000639054 KIF3BO15066 747 aa17.31■□□□□ 0.36
PAX6-250ENST00000639054 DIP2CQ9Y2E4 1556 aa17.3■□□□□ 0.36
PAX6-250ENST00000639054 A2MP01023 1474 aa17.3■□□□□ 0.36
PAX6-250ENST00000639054 ZMYM4Q5VZL5 1548 aa17.29■□□□□ 0.36
PAX6-250ENST00000639054 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms