RNA–Protein interactions for RNA: ENST00000638283.1

KCNMA1-231, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-231	ENST00000638283	CAMSAP2	Q08AD1	1489 aa		13.49	□□□□□ -0.25
KCNMA1-231	ENST00000638283	PREX2	Q70Z35	1606 aa		13.49	□□□□□ -0.25
KCNMA1-231	ENST00000638283	ABCA9	Q8IUA7	1624 aa		13.49	□□□□□ -0.25
KCNMA1-231	ENST00000638283	ARHGAP5	Q13017	1502 aa		13.49	□□□□□ -0.25
KCNMA1-231	ENST00000638283	ITSN2	Q9NZM3	1697 aa		13.49	□□□□□ -0.25
KCNMA1-231	ENST00000638283	FAM69C	Q0P6D2	419 aa		13.48	□□□□□ -0.25
KCNMA1-231	ENST00000638283	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
KCNMA1-231	ENST00000638283	MYO5C	Q9NQX4	1742 aa		13.47	□□□□□ -0.25
KCNMA1-231	ENST00000638283	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
KCNMA1-231	ENST00000638283	CD109	Q6YHK3	1445 aa		13.46	□□□□□ -0.25
KCNMA1-231	ENST00000638283	SAMD9L	Q8IVG5	1584 aa		13.46	□□□□□ -0.25
KCNMA1-231	ENST00000638283	CHIC2	Q9UKJ5	165 aa		13.45	□□□□□ -0.26
KCNMA1-231	ENST00000638283	DIP2B	Q9P265	1576 aa		13.45	□□□□□ -0.26
KCNMA1-231	ENST00000638283	EFCAB2	Q5VUJ9	269 aa		13.44	□□□□□ -0.26
KCNMA1-231	ENST00000638283	ABCC5	O15440	1437 aa		13.44	□□□□□ -0.26
KCNMA1-231	ENST00000638283	ARHGEF12	Q9NZN5	1544 aa		13.43	□□□□□ -0.26
KCNMA1-231	ENST00000638283	FANCA	O15360	1455 aa		13.43	□□□□□ -0.26
KCNMA1-231	ENST00000638283	KIF13A	Q9H1H9	1805 aa		13.43	□□□□□ -0.26
KCNMA1-231	ENST00000638283	DAPK1	P53355	1430 aa		13.42	□□□□□ -0.26
KCNMA1-231	ENST00000638283	MBD5	Q9P267	1494 aa		13.42	□□□□□ -0.26
KCNMA1-231	ENST00000638283	SYCP2	Q9BX26	1530 aa		13.42	□□□□□ -0.26
KCNMA1-231	ENST00000638283	GLI2	P10070	1586 aa		13.4	□□□□□ -0.26
KCNMA1-231	ENST00000638283	MAP3K4	Q9Y6R4	1608 aa		13.4	□□□□□ -0.26
KCNMA1-231	ENST00000638283	ARAP3	Q8WWN8	1544 aa		13.4	□□□□□ -0.27
KCNMA1-231	ENST00000638283	DNMT1	P26358	1616 aa	Known RBP	13.39	□□□□□ -0.27
KCNMA1-231	ENST00000638283	RRP7BP	Q9NSQ0	103 aa		13.39	□□□□□ -0.27
KCNMA1-231	ENST00000638283	TRAPPC8	Q9Y2L5	1435 aa		13.38	□□□□□ -0.27
KCNMA1-231	ENST00000638283	AFAP1	Q8N556	730 aa		13.38	□□□□□ -0.27
KCNMA1-231	ENST00000638283	ABCC1	P33527	1531 aa		13.38	□□□□□ -0.27
KCNMA1-231	ENST00000638283	AKNA	Q7Z591	1439 aa		13.37	□□□□□ -0.27
KCNMA1-231	ENST00000638283	KIAA1107	Q9UPP5	1409 aa		13.37	□□□□□ -0.27
KCNMA1-231	ENST00000638283	ADGRL1	O94910	1474 aa		13.36	□□□□□ -0.27
KCNMA1-231	ENST00000638283	SCAPER	Q9BY12	1400 aa		13.36	□□□□□ -0.27
KCNMA1-231	ENST00000638283	TSPOAP1	O95153	1857 aa		13.36	□□□□□ -0.27
KCNMA1-231	ENST00000638283	PPRC1	Q5VV67	1664 aa	Known RBP	13.36	□□□□□ -0.27
KCNMA1-231	ENST00000638283	TRH	P20396	242 aa	Predicted RBP	13.35	□□□□□ -0.27
KCNMA1-231	ENST00000638283	CCDC141	Q6ZP82	1450 aa		13.35	□□□□□ -0.27
KCNMA1-231	ENST00000638283	PLEKHH2	Q8IVE3	1493 aa		13.34	□□□□□ -0.27
KCNMA1-231	ENST00000638283	ARHGEF5	Q12774	1597 aa		13.34	□□□□□ -0.27
KCNMA1-231	ENST00000638283	C9orf84	Q5VXU9	1444 aa		13.34	□□□□□ -0.27
KCNMA1-231	ENST00000638283	RAB3GAP2	Q9H2M9	1393 aa		13.33	□□□□□ -0.27
KCNMA1-231	ENST00000638283	TSPY4	P0CV99	314 aa		13.33	□□□□□ -0.27
KCNMA1-231	ENST00000638283	TSPY10	P0CW01	314 aa		13.33	□□□□□ -0.27
KCNMA1-231	ENST00000638283	NAIP	Q13075	1403 aa		13.33	□□□□□ -0.28
KCNMA1-231	ENST00000638283	RAPGEF3	O95398	923 aa		13.33	□□□□□ -0.28
KCNMA1-231	ENST00000638283	CROCC2	H7BZ55	1655 aa		13.33	□□□□□ -0.28
KCNMA1-231	ENST00000638283	HFM1	A2PYH4	1435 aa		13.32	□□□□□ -0.28
KCNMA1-231	ENST00000638283	SETD5	Q9C0A6	1442 aa		13.32	□□□□□ -0.28
KCNMA1-231	ENST00000638283	NCOA1	Q15788	1441 aa		13.32	□□□□□ -0.28
KCNMA1-231	ENST00000638283	NEO1	Q92859	1461 aa		13.31	□□□□□ -0.28
KCNMA1-231	ENST00000638283	RSPH4A	Q5TD94	716 aa		13.31	□□□□□ -0.28
KCNMA1-231	ENST00000638283	KDM6B	O15054	1643 aa		13.3	□□□□□ -0.28
KCNMA1-231	ENST00000638283	ROCK1	Q13464	1354 aa		13.3	□□□□□ -0.28
KCNMA1-231	ENST00000638283	SHANK2	Q9UPX8	1470 aa		13.3	□□□□□ -0.28
KCNMA1-231	ENST00000638283	ADGRL2	O95490	1459 aa		13.29	□□□□□ -0.28
KCNMA1-231	ENST00000638283	CFAP74	Q9C0B2	1584 aa		13.28	□□□□□ -0.28
KCNMA1-231	ENST00000638283	POGZ	Q7Z3K3	1410 aa		13.28	□□□□□ -0.28
KCNMA1-231	ENST00000638283	SPAG9	O60271	1321 aa	Known RBP	13.28	□□□□□ -0.28
KCNMA1-231	ENST00000638283	ANKRD30A	Q9BXX3	1397 aa		13.28	□□□□□ -0.28
KCNMA1-231	ENST00000638283	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.27	□□□□□ -0.28
KCNMA1-231	ENST00000638283	KIF15	Q9NS87	1388 aa		13.27	□□□□□ -0.29
KCNMA1-231	ENST00000638283	DENND4B	O75064	1496 aa	Predicted RBP	13.26	□□□□□ -0.29
KCNMA1-231	ENST00000638283	ZNF518A	Q6AHZ1	1483 aa		13.26	□□□□□ -0.29
KCNMA1-231	ENST00000638283	TEX14	Q8IWB6	1497 aa		13.26	□□□□□ -0.29
KCNMA1-231	ENST00000638283	MYT1L	Q9UL68	1186 aa		13.26	□□□□□ -0.29
KCNMA1-231	ENST00000638283	ADGB	Q8N7X0	1667 aa		13.26	□□□□□ -0.29
KCNMA1-231	ENST00000638283	ZFYVE16	Q7Z3T8	1539 aa		13.25	□□□□□ -0.29
KCNMA1-231	ENST00000638283	MAST1	Q9Y2H9	1570 aa		13.25	□□□□□ -0.29
KCNMA1-231	ENST00000638283	GCC2	Q8IWJ2	1684 aa		13.24	□□□□□ -0.29
KCNMA1-231	ENST00000638283	FRMPD1	Q5SYB0	1578 aa		13.23	□□□□□ -0.29
KCNMA1-231	ENST00000638283	ANKRD50	Q9ULJ7	1429 aa		13.23	□□□□□ -0.29
KCNMA1-231	ENST00000638283	KDM5C	P41229	1560 aa		13.23	□□□□□ -0.29
KCNMA1-231	ENST00000638283	ATP7A	Q04656	1500 aa		13.23	□□□□□ -0.29
KCNMA1-231	ENST00000638283	CCER1	Q8TC90	406 aa	Predicted RBP	13.23	□□□□□ -0.29
KCNMA1-231	ENST00000638283	INO80	Q9ULG1	1556 aa	Predicted RBP	13.22	□□□□□ -0.29
KCNMA1-231	ENST00000638283	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.22	□□□□□ -0.29
KCNMA1-231	ENST00000638283	RICTOR	Q6R327	1708 aa		13.22	□□□□□ -0.29
KCNMA1-231	ENST00000638283	DHX57	Q6P158	1386 aa	Known RBP	13.21	□□□□□ -0.29
KCNMA1-231	ENST00000638283	KIDINS220	Q9ULH0	1771 aa		13.21	□□□□□ -0.29
KCNMA1-231	ENST00000638283	PLXNC1	O60486	1568 aa		13.21	□□□□□ -0.3
KCNMA1-231	ENST00000638283	YEATS2	Q9ULM3	1422 aa		13.2	□□□□□ -0.3
KCNMA1-231	ENST00000638283	TRIM52	Q96A61	297 aa		13.2	□□□□□ -0.3
KCNMA1-231	ENST00000638283	MLH3	Q9UHC1	1453 aa		13.19	□□□□□ -0.3
KCNMA1-231	ENST00000638283	HRC	P23327	699 aa		13.19	□□□□□ -0.3
KCNMA1-231	ENST00000638283	HECW2	Q9P2P5	1572 aa		13.18	□□□□□ -0.3
KCNMA1-231	ENST00000638283	DUOX2	Q9NRD8	1548 aa		13.17	□□□□□ -0.3
KCNMA1-231	ENST00000638283	ABCA6	Q8N139	1617 aa		13.16	□□□□□ -0.3
KCNMA1-231	ENST00000638283	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
KCNMA1-231	ENST00000638283	DHX29	Q7Z478	1369 aa	Known RBP	13.15	□□□□□ -0.3
KCNMA1-231	ENST00000638283	FOXD1	Q16676	465 aa		13.14	□□□□□ -0.31
KCNMA1-231	ENST00000638283	ZMYM4	Q5VZL5	1548 aa		13.14	□□□□□ -0.31
KCNMA1-231	ENST00000638283	ERBIN	Q96RT1	1412 aa		13.14	□□□□□ -0.31
KCNMA1-231	ENST00000638283	DIP2C	Q9Y2E4	1556 aa		13.14	□□□□□ -0.31
KCNMA1-231	ENST00000638283	A2M	P01023	1474 aa		13.14	□□□□□ -0.31
KCNMA1-231	ENST00000638283	KIF3B	O15066	747 aa		13.13	□□□□□ -0.31
KCNMA1-231	ENST00000638283	NUP155	O75694	1391 aa		13.13	□□□□□ -0.31
KCNMA1-231	ENST00000638283	MPHOSPH9	Q99550	1183 aa		13.13	□□□□□ -0.31
KCNMA1-231	ENST00000638283	PZP	P20742	1482 aa		13.12	□□□□□ -0.31
KCNMA1-231	ENST00000638283	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.11	□□□□□ -0.31
KCNMA1-231	ENST00000638283	MAGI2	Q86UL8	1455 aa		13.1	□□□□□ -0.31

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