RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 HMGXB3Q12766 1538 aa17.33■□□□□ 0.36
PCCA-215ENST00000637657 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.36
PCCA-215ENST00000637657 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
PCCA-215ENST00000637657 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
PCCA-215ENST00000637657 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
PCCA-215ENST00000637657 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
PCCA-215ENST00000637657 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
PCCA-215ENST00000637657 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
PCCA-215ENST00000637657 DAXXQ9UER7 740 aaPredicted RBP17.3■□□□□ 0.36
PCCA-215ENST00000637657 RRP1P56182 461 aaKnown RBP17.29■□□□□ 0.36
PCCA-215ENST00000637657 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
PCCA-215ENST00000637657 PTPRKQ15262 1439 aa17.27■□□□□ 0.36
PCCA-215ENST00000637657 CFTRP13569 1480 aa17.27■□□□□ 0.35
PCCA-215ENST00000637657 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
PCCA-215ENST00000637657 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
PCCA-215ENST00000637657 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
PCCA-215ENST00000637657 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
PCCA-215ENST00000637657 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
PCCA-215ENST00000637657 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
PCCA-215ENST00000637657 CTTNBP2Q8WZ74 1663 aa17.24■□□□□ 0.35
PCCA-215ENST00000637657 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
PCCA-215ENST00000637657 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
PCCA-215ENST00000637657 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
PCCA-215ENST00000637657 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
PCCA-215ENST00000637657 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
PCCA-215ENST00000637657 DENND4BO75064 1496 aaPredicted RBP17.2■□□□□ 0.34
PCCA-215ENST00000637657 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
PCCA-215ENST00000637657 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
PCCA-215ENST00000637657 BRD4O60885 1362 aaPredicted RBP17.2■□□□□ 0.34
PCCA-215ENST00000637657 INSRP06213 1382 aa17.19■□□□□ 0.34
PCCA-215ENST00000637657 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
PCCA-215ENST00000637657 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
PCCA-215ENST00000637657 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
PCCA-215ENST00000637657 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
PCCA-215ENST00000637657 CUL7Q14999 1698 aa17.18■□□□□ 0.34
PCCA-215ENST00000637657 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
PCCA-215ENST00000637657 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
PCCA-215ENST00000637657 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
PCCA-215ENST00000637657 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
PCCA-215ENST00000637657 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
PCCA-215ENST00000637657 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
PCCA-215ENST00000637657 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
PCCA-215ENST00000637657 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
PCCA-215ENST00000637657 KIF14Q15058 1648 aa17.12■□□□□ 0.33
PCCA-215ENST00000637657 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
PCCA-215ENST00000637657 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
PCCA-215ENST00000637657 RALBP1Q15311 655 aa17.11■□□□□ 0.33
PCCA-215ENST00000637657 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
PCCA-215ENST00000637657 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
PCCA-215ENST00000637657 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
PCCA-215ENST00000637657 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
PCCA-215ENST00000637657 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
PCCA-215ENST00000637657 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
PCCA-215ENST00000637657 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
PCCA-215ENST00000637657 LRRIQ1Q96JM4 1722 aa17.07■□□□□ 0.32
PCCA-215ENST00000637657 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
PCCA-215ENST00000637657 KDM5CP41229 1560 aa17.07■□□□□ 0.32
PCCA-215ENST00000637657 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
PCCA-215ENST00000637657 CENPQQ7L2Z9 268 aaPredicted RBP17.06■□□□□ 0.32
PCCA-215ENST00000637657 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
PCCA-215ENST00000637657 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
PCCA-215ENST00000637657 E9PCH4 1651 aa17.04■□□□□ 0.32
PCCA-215ENST00000637657 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
PCCA-215ENST00000637657 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCCA-215ENST00000637657 USP47Q96K76 1375 aa17.04■□□□□ 0.32
PCCA-215ENST00000637657 HSP90AA2PQ14568 343 aaPredicted RBP17.03■□□□□ 0.32
PCCA-215ENST00000637657 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.31
PCCA-215ENST00000637657 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.31
PCCA-215ENST00000637657 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.31
PCCA-215ENST00000637657 ZMYND15Q9H091 742 aa17.02■□□□□ 0.31
PCCA-215ENST00000637657 CLCN1P35523 988 aa17.01■□□□□ 0.31
PCCA-215ENST00000637657 KDM6BO15054 1643 aa17.01■□□□□ 0.31
PCCA-215ENST00000637657 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
PCCA-215ENST00000637657 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
PCCA-215ENST00000637657 P3H3Q8IVL6 736 aa16.99■□□□□ 0.31
PCCA-215ENST00000637657 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
PCCA-215ENST00000637657 BECN1Q14457 450 aa16.98■□□□□ 0.31
PCCA-215ENST00000637657 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
PCCA-215ENST00000637657 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
PCCA-215ENST00000637657 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
PCCA-215ENST00000637657 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
PCCA-215ENST00000637657 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
PCCA-215ENST00000637657 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
PCCA-215ENST00000637657 BLMP54132 1417 aaPredicted RBP16.95■□□□□ 0.3
PCCA-215ENST00000637657 RRAGDQ9NQL2 400 aaPredicted RBP16.94■□□□□ 0.3
PCCA-215ENST00000637657 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
PCCA-215ENST00000637657 ARHGEF12Q9NZN5 1544 aa16.94■□□□□ 0.3
PCCA-215ENST00000637657 DNMT1P26358 1616 aaKnown RBP16.93■□□□□ 0.3
PCCA-215ENST00000637657 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
PCCA-215ENST00000637657 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
PCCA-215ENST00000637657 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
PCCA-215ENST00000637657 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
PCCA-215ENST00000637657 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
PCCA-215ENST00000637657 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
PCCA-215ENST00000637657 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
PCCA-215ENST00000637657 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
PCCA-215ENST00000637657 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
PCCA-215ENST00000637657 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
PCCA-215ENST00000637657 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
PCCA-215ENST00000637657 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms