RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
CTSD-207ENST00000636571 ITSN2Q9NZM3 1697 aa24.06■■□□□ 1.44
CTSD-207ENST00000636571 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
CTSD-207ENST00000636571 ARAP3Q8WWN8 1544 aa24.04■■□□□ 1.44
CTSD-207ENST00000636571 CFDP1Q9UEE9 299 aaPredicted RBP24.03■■□□□ 1.44
CTSD-207ENST00000636571 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
CTSD-207ENST00000636571 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
CTSD-207ENST00000636571 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
CTSD-207ENST00000636571 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
CTSD-207ENST00000636571 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
CTSD-207ENST00000636571 NEO1Q92859 1461 aa24■■□□□ 1.43
CTSD-207ENST00000636571 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
CTSD-207ENST00000636571 CFAP74Q9C0B2 1584 aa23.99■■□□□ 1.43
CTSD-207ENST00000636571 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
CTSD-207ENST00000636571 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
CTSD-207ENST00000636571 KDM6BO15054 1643 aa23.95■■□□□ 1.42
CTSD-207ENST00000636571 ABCC1P33527 1531 aa23.94■■□□□ 1.42
CTSD-207ENST00000636571 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
CTSD-207ENST00000636571 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
CTSD-207ENST00000636571 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
CTSD-207ENST00000636571 SYCP2Q9BX26 1530 aa23.93■■□□□ 1.42
CTSD-207ENST00000636571 RAPGEF3O95398 923 aa23.92■■□□□ 1.42
CTSD-207ENST00000636571 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
CTSD-207ENST00000636571 MIA2Q96PC5 1412 aa23.91■■□□□ 1.42
CTSD-207ENST00000636571 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.42
CTSD-207ENST00000636571 FRMPD1Q5SYB0 1578 aa23.9■■□□□ 1.42
CTSD-207ENST00000636571 RICTORQ6R327 1708 aa23.89■■□□□ 1.41
CTSD-207ENST00000636571 TRAPPC8Q9Y2L5 1435 aa23.88■■□□□ 1.41
CTSD-207ENST00000636571 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
CTSD-207ENST00000636571 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
CTSD-207ENST00000636571 POGZQ7Z3K3 1410 aa23.85■■□□□ 1.41
CTSD-207ENST00000636571 MBD5Q9P267 1494 aa23.85■■□□□ 1.41
CTSD-207ENST00000636571 TCOF1Q13428 1488 aaKnown RBP23.84■■□□□ 1.41
CTSD-207ENST00000636571 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.41
CTSD-207ENST00000636571 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.41
CTSD-207ENST00000636571 FAM50AQ14320 339 aaKnown RBP23.83■■□□□ 1.4
CTSD-207ENST00000636571 ZNF518AQ6AHZ1 1483 aa23.79■■□□□ 1.4
CTSD-207ENST00000636571 RRBP1Q9P2E9 1410 aaKnown RBP23.79■■□□□ 1.4
CTSD-207ENST00000636571 KDM5CP41229 1560 aa23.77■■□□□ 1.4
CTSD-207ENST00000636571 ARHGEF5Q12774 1597 aa23.77■■□□□ 1.4
CTSD-207ENST00000636571 CCDC141Q6ZP82 1450 aa23.75■■□□□ 1.39
CTSD-207ENST00000636571 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
CTSD-207ENST00000636571 ABCC5O15440 1437 aa23.73■■□□□ 1.39
CTSD-207ENST00000636571 ZMYM4Q5VZL5 1548 aa23.73■■□□□ 1.39
CTSD-207ENST00000636571 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
CTSD-207ENST00000636571 DAPK1P53355 1430 aa23.72■■□□□ 1.39
CTSD-207ENST00000636571 YEATS2Q9ULM3 1422 aa23.72■■□□□ 1.39
CTSD-207ENST00000636571 KIDINS220Q9ULH0 1771 aa23.71■■□□□ 1.39
CTSD-207ENST00000636571 HECW2Q9P2P5 1572 aa23.71■■□□□ 1.39
CTSD-207ENST00000636571 ITGAEP38570 1179 aa23.71■■□□□ 1.39
CTSD-207ENST00000636571 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
CTSD-207ENST00000636571 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
CTSD-207ENST00000636571 PTPRKQ15262 1439 aa23.69■■□□□ 1.38
CTSD-207ENST00000636571 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
CTSD-207ENST00000636571 INO80Q9ULG1 1556 aaPredicted RBP23.68■■□□□ 1.38
CTSD-207ENST00000636571 ATP7AQ04656 1500 aa23.67■■□□□ 1.38
CTSD-207ENST00000636571 MLH3Q9UHC1 1453 aa23.67■■□□□ 1.38
CTSD-207ENST00000636571 CHIC2Q9UKJ5 165 aa23.67■■□□□ 1.38
CTSD-207ENST00000636571 ABCA6Q8N139 1617 aa23.67■■□□□ 1.38
CTSD-207ENST00000636571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.66■■□□□ 1.38
CTSD-207ENST00000636571 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
CTSD-207ENST00000636571 RSPH4AQ5TD94 716 aa23.65■■□□□ 1.38
CTSD-207ENST00000636571 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
CTSD-207ENST00000636571 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
CTSD-207ENST00000636571 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
CTSD-207ENST00000636571 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
CTSD-207ENST00000636571 MAST1Q9Y2H9 1570 aa23.63■■□□□ 1.37
CTSD-207ENST00000636571 MAGI2Q86UL8 1455 aa23.63■■□□□ 1.37
CTSD-207ENST00000636571 SIGLEC1Q9BZZ2 1709 aa23.62■■□□□ 1.37
CTSD-207ENST00000636571 SHANK2Q9UPX8 1470 aa23.61■■□□□ 1.37
CTSD-207ENST00000636571 RTEL1-TNFRSF6BF6WH68 1400 aa23.59■■□□□ 1.37
CTSD-207ENST00000636571 ADGBQ8N7X0 1667 aa23.59■■□□□ 1.37
CTSD-207ENST00000636571 RRP7BPQ9NSQ0 103 aa23.56■■□□□ 1.36
CTSD-207ENST00000636571 ATP10AO60312 1499 aa23.55■■□□□ 1.36
CTSD-207ENST00000636571 PLXNC1O60486 1568 aa23.54■■□□□ 1.36
CTSD-207ENST00000636571 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
CTSD-207ENST00000636571 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
CTSD-207ENST00000636571 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
CTSD-207ENST00000636571 KIF15Q9NS87 1388 aa23.51■■□□□ 1.35
CTSD-207ENST00000636571 A2MP01023 1474 aa23.51■■□□□ 1.35
CTSD-207ENST00000636571 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
CTSD-207ENST00000636571 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
CTSD-207ENST00000636571 REREQ9P2R6 1566 aa23.46■■□□□ 1.35
CTSD-207ENST00000636571 ROCK1Q13464 1354 aa23.46■■□□□ 1.35
CTSD-207ENST00000636571 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.34
CTSD-207ENST00000636571 DHX29Q7Z478 1369 aaKnown RBP23.45■■□□□ 1.34
CTSD-207ENST00000636571 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
CTSD-207ENST00000636571 MLECQ14165 292 aa23.42■■□□□ 1.34
CTSD-207ENST00000636571 NAIPQ13075 1403 aa23.39■■□□□ 1.34
CTSD-207ENST00000636571 AGLP35573 1532 aa23.39■■□□□ 1.34
CTSD-207ENST00000636571 KIF3BO15066 747 aa23.39■■□□□ 1.33
CTSD-207ENST00000636571 GCC2Q8IWJ2 1684 aa23.39■■□□□ 1.33
CTSD-207ENST00000636571 ANKRD50Q9ULJ7 1429 aa23.38■■□□□ 1.33
CTSD-207ENST00000636571 ERBINQ96RT1 1412 aa23.37■■□□□ 1.33
CTSD-207ENST00000636571 BCORL1Q5H9F3 1711 aa23.37■■□□□ 1.33
CTSD-207ENST00000636571 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
CTSD-207ENST00000636571 EIF2AK4Q9P2K8 1649 aaKnown RBP23.35■■□□□ 1.33
CTSD-207ENST00000636571 GGT6Q6P531 493 aa23.35■■□□□ 1.33
CTSD-207ENST00000636571 MROH1Q8NDA8 1641 aa23.32■■□□□ 1.32
CTSD-207ENST00000636571 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms