RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 ARAP3Q8WWN8 1544 aa19.09■□□□□ 0.65
TNFAIP3-211ENST00000621150 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
TNFAIP3-211ENST00000621150 PLEKHD1A6NEE1 506 aa19.06■□□□□ 0.64
TNFAIP3-211ENST00000621150 CDK13Q14004 1512 aaKnown RBP19.04■□□□□ 0.64
TNFAIP3-211ENST00000621150 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
TNFAIP3-211ENST00000621150 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.64
TNFAIP3-211ENST00000621150 NEO1Q92859 1461 aa19.02■□□□□ 0.64
TNFAIP3-211ENST00000621150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
TNFAIP3-211ENST00000621150 HECW1Q76N89 1606 aa19.01■□□□□ 0.63
TNFAIP3-211ENST00000621150 TTC37Q6PGP7 1564 aa18.99■□□□□ 0.63
TNFAIP3-211ENST00000621150 LRRIQ1Q96JM4 1722 aa18.98■□□□□ 0.63
TNFAIP3-211ENST00000621150 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
TNFAIP3-211ENST00000621150 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
TNFAIP3-211ENST00000621150 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
TNFAIP3-211ENST00000621150 RRBP1Q9P2E9 1410 aaKnown RBP18.95■□□□□ 0.62
TNFAIP3-211ENST00000621150 CFAP74Q9C0B2 1584 aa18.95■□□□□ 0.62
TNFAIP3-211ENST00000621150 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
TNFAIP3-211ENST00000621150 FANCAO15360 1455 aa18.94■□□□□ 0.62
TNFAIP3-211ENST00000621150 RICTORQ6R327 1708 aa18.93■□□□□ 0.62
TNFAIP3-211ENST00000621150 HRCP23327 699 aa18.92■□□□□ 0.62
TNFAIP3-211ENST00000621150 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
TNFAIP3-211ENST00000621150 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
TNFAIP3-211ENST00000621150 MYO5CQ9NQX4 1742 aa18.89■□□□□ 0.61
TNFAIP3-211ENST00000621150 KIF14Q15058 1648 aa18.89■□□□□ 0.61
TNFAIP3-211ENST00000621150 DENND4BO75064 1496 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP3-211ENST00000621150 CDK11AQ9UQ88 783 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP3-211ENST00000621150 PLCH2O75038 1416 aa18.87■□□□□ 0.61
TNFAIP3-211ENST00000621150 TROQ12816 1431 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP3-211ENST00000621150 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
TNFAIP3-211ENST00000621150 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.61
TNFAIP3-211ENST00000621150 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.6
TNFAIP3-211ENST00000621150 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.6
TNFAIP3-211ENST00000621150 ZMYM4Q5VZL5 1548 aa18.82■□□□□ 0.6
TNFAIP3-211ENST00000621150 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
TNFAIP3-211ENST00000621150 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
TNFAIP3-211ENST00000621150 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
TNFAIP3-211ENST00000621150 CDC42BPBQ9Y5S2 1711 aa18.79■□□□□ 0.6
TNFAIP3-211ENST00000621150 PLCB2Q00722 1185 aa18.78■□□□□ 0.6
TNFAIP3-211ENST00000621150 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
TNFAIP3-211ENST00000621150 HECW2Q9P2P5 1572 aa18.78■□□□□ 0.6
TNFAIP3-211ENST00000621150 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
TNFAIP3-211ENST00000621150 ZFYVE16Q7Z3T8 1539 aa18.77■□□□□ 0.59
TNFAIP3-211ENST00000621150 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.59
TNFAIP3-211ENST00000621150 NCOA2Q15596 1464 aa18.77■□□□□ 0.59
TNFAIP3-211ENST00000621150 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
TNFAIP3-211ENST00000621150 MAGI2Q86UL8 1455 aa18.76■□□□□ 0.59
TNFAIP3-211ENST00000621150 YEATS2Q9ULM3 1422 aa18.76■□□□□ 0.59
TNFAIP3-211ENST00000621150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.76■□□□□ 0.59
TNFAIP3-211ENST00000621150 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-211ENST00000621150 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-211ENST00000621150 SUPT6HQ7KZ85 1726 aaKnown RBP18.75■□□□□ 0.59
TNFAIP3-211ENST00000621150 MADDQ8WXG6 1647 aa18.75■□□□□ 0.59
TNFAIP3-211ENST00000621150 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
TNFAIP3-211ENST00000621150 PTPRMP28827 1452 aa18.74■□□□□ 0.59
TNFAIP3-211ENST00000621150 CDC42BPAQ5VT25 1732 aa18.72■□□□□ 0.59
TNFAIP3-211ENST00000621150 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
TNFAIP3-211ENST00000621150 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
TNFAIP3-211ENST00000621150 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
TNFAIP3-211ENST00000621150 ZNF518AQ6AHZ1 1483 aa18.69■□□□□ 0.58
TNFAIP3-211ENST00000621150 KDM5CP41229 1560 aa18.69■□□□□ 0.58
TNFAIP3-211ENST00000621150 ATXN8OSP0DMR3 200 aa18.68■□□□□ 0.58
TNFAIP3-211ENST00000621150 AFAP1Q8N556 730 aa18.66■□□□□ 0.58
TNFAIP3-211ENST00000621150 ATP10AO60312 1499 aa18.66■□□□□ 0.58
TNFAIP3-211ENST00000621150 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
TNFAIP3-211ENST00000621150 ABCC1P33527 1531 aa18.66■□□□□ 0.58
TNFAIP3-211ENST00000621150 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.57
TNFAIP3-211ENST00000621150 FER1L4A9Z1Z3 1794 aa18.63■□□□□ 0.57
TNFAIP3-211ENST00000621150 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
TNFAIP3-211ENST00000621150 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
TNFAIP3-211ENST00000621150 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
TNFAIP3-211ENST00000621150 BCANQ96GW7 911 aa18.62■□□□□ 0.57
TNFAIP3-211ENST00000621150 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
TNFAIP3-211ENST00000621150 TRAPPC8Q9Y2L5 1435 aa18.61■□□□□ 0.57
TNFAIP3-211ENST00000621150 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
TNFAIP3-211ENST00000621150 GPATCH8Q9UKJ3 1502 aaKnown RBP18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 ABCA6Q8N139 1617 aa18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 SAMD9LQ8IVG5 1584 aa18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 MLECQ14165 292 aa18.6■□□□□ 0.57
TNFAIP3-211ENST00000621150 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
TNFAIP3-211ENST00000621150 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
TNFAIP3-211ENST00000621150 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
TNFAIP3-211ENST00000621150 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
TNFAIP3-211ENST00000621150 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
TNFAIP3-211ENST00000621150 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
TNFAIP3-211ENST00000621150 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP3-211ENST00000621150 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP3-211ENST00000621150 TAOK2Q9UL54 1235 aa18.55■□□□□ 0.56
TNFAIP3-211ENST00000621150 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
TNFAIP3-211ENST00000621150 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
TNFAIP3-211ENST00000621150 PTPRKQ15262 1439 aa18.54■□□□□ 0.56
TNFAIP3-211ENST00000621150 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.55
TNFAIP3-211ENST00000621150 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.55
TNFAIP3-211ENST00000621150 HAP1P54257 671 aaPredicted RBP18.51■□□□□ 0.55
TNFAIP3-211ENST00000621150 ITGAEP38570 1179 aa18.49■□□□□ 0.55
TNFAIP3-211ENST00000621150 AGLP35573 1532 aa18.49■□□□□ 0.55
TNFAIP3-211ENST00000621150 SETD5Q9C0A6 1442 aa18.49■□□□□ 0.55
TNFAIP3-211ENST00000621150 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
TNFAIP3-211ENST00000621150 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms