RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 KCNH8Q96L42 1107 aa7.78□□□□□ -1.16
CPNE4-214ENST00000617767 SUPT6HQ7KZ85 1726 aaKnown RBP7.77□□□□□ -1.16
CPNE4-214ENST00000617767 KIAA0586Q9BVV6 1533 aa7.77□□□□□ -1.17
CPNE4-214ENST00000617767 CNGB1Q14028 1251 aaPredicted RBP7.77□□□□□ -1.17
CPNE4-214ENST00000617767 MAPKBP1O60336 1514 aa7.77□□□□□ -1.17
CPNE4-214ENST00000617767 CFDP1Q9UEE9 299 aaPredicted RBP7.76□□□□□ -1.17
CPNE4-214ENST00000617767 SYNJ2O15056 1496 aa7.76□□□□□ -1.17
CPNE4-214ENST00000617767 CCDC18Q5T9S5 1454 aa7.76□□□□□ -1.17
CPNE4-214ENST00000617767 DDX10Q13206 875 aaKnown RBP7.76□□□□□ -1.17
CPNE4-214ENST00000617767 KIAA0556O60303 1618 aa7.76□□□□□ -1.17
CPNE4-214ENST00000617767 HECW1Q76N89 1606 aa7.76□□□□□ -1.17
CPNE4-214ENST00000617767 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
CPNE4-214ENST00000617767 PTPN23Q9H3S7 1636 aa7.75□□□□□ -1.17
CPNE4-214ENST00000617767 NUP153P49790 1475 aaKnown RBP7.75□□□□□ -1.17
CPNE4-214ENST00000617767 PDIA4P13667 645 aaKnown RBP7.75□□□□□ -1.17
CPNE4-214ENST00000617767 KLHL34Q8N239 644 aa7.75□□□□□ -1.17
CPNE4-214ENST00000617767 ZMYND15Q9H091 742 aa7.75□□□□□ -1.17
CPNE4-214ENST00000617767 EHBP1L1Q8N3D4 1523 aa7.74□□□□□ -1.17
CPNE4-214ENST00000617767 ZNF326Q5BKZ1 582 aaKnown RBP7.74□□□□□ -1.17
CPNE4-214ENST00000617767 MAGI1Q96QZ7 1491 aaPredicted RBP7.74□□□□□ -1.17
CPNE4-214ENST00000617767 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
CPNE4-214ENST00000617767 UGGT2Q9NYU1 1516 aa7.73□□□□□ -1.17
CPNE4-214ENST00000617767 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
CPNE4-214ENST00000617767 CARMIL2Q6F5E8 1435 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 TIMELESSQ9UNS1 1208 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 NAIPQ13075 1403 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 HNRNPMP52272 730 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPNE4-214ENST00000617767 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 KDM6BO15054 1643 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 RAPGEF6Q8TEU7 1601 aa7.72□□□□□ -1.17
CPNE4-214ENST00000617767 BCL11BQ9C0K0 894 aaPredicted RBP7.71□□□□□ -1.17
CPNE4-214ENST00000617767 KIF14Q15058 1648 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 NBR1Q14596 966 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 SLC4A1APQ9BWU0 796 aaKnown RBP7.7□□□□□ -1.18
CPNE4-214ENST00000617767 CHD1O14646 1710 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 FGD1P98174 961 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 POLR3GLQ9BT43 218 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 PTPRGP23470 1445 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
CPNE4-214ENST00000617767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPNE4-214ENST00000617767 HFM1A2PYH4 1435 aa7.69□□□□□ -1.18
CPNE4-214ENST00000617767 ERCC6L2Q5T890 1561 aa7.69□□□□□ -1.18
CPNE4-214ENST00000617767 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
CPNE4-214ENST00000617767 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
CPNE4-214ENST00000617767 NUP160Q12769 1436 aa7.67□□□□□ -1.18
CPNE4-214ENST00000617767 GLIPR1L2Q4G1C9 344 aa7.67□□□□□ -1.18
CPNE4-214ENST00000617767 UACAQ9BZF9 1416 aa7.66□□□□□ -1.18
CPNE4-214ENST00000617767 ABCC5O15440 1437 aa7.66□□□□□ -1.18
CPNE4-214ENST00000617767 DAPK1P53355 1430 aa7.66□□□□□ -1.18
CPNE4-214ENST00000617767 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
CPNE4-214ENST00000617767 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
CPNE4-214ENST00000617767 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
CPNE4-214ENST00000617767 ATP10BO94823 1461 aa7.65□□□□□ -1.18
CPNE4-214ENST00000617767 AAMPQ13685 434 aa7.65□□□□□ -1.18
CPNE4-214ENST00000617767 L3MBTL2Q969R5 705 aa7.65□□□□□ -1.18
CPNE4-214ENST00000617767 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
CPNE4-214ENST00000617767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.65□□□□□ -1.19
CPNE4-214ENST00000617767 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 FKBP8Q14318 412 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 CAMSAP2Q08AD1 1489 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 GPATCH8Q9UKJ3 1502 aaKnown RBP7.64□□□□□ -1.19
CPNE4-214ENST00000617767 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 PKD2Q13563 968 aa7.64□□□□□ -1.19
CPNE4-214ENST00000617767 MIA2Q96PC5 1412 aa7.62□□□□□ -1.19
CPNE4-214ENST00000617767 RGL3Q3MIN7 710 aa7.62□□□□□ -1.19
CPNE4-214ENST00000617767 TCOF1Q13428 1488 aaKnown RBP7.61□□□□□ -1.19
CPNE4-214ENST00000617767 DENND4BO75064 1496 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-214ENST00000617767 HSPA5P11021 654 aaKnown RBP7.61□□□□□ -1.19
CPNE4-214ENST00000617767 NUP155O75694 1391 aa7.6□□□□□ -1.19
CPNE4-214ENST00000617767 NBPF8Q3BBV2 869 aa7.6□□□□□ -1.19
CPNE4-214ENST00000617767 SENP3Q9H4L4 574 aaPredicted RBP7.6□□□□□ -1.19
CPNE4-214ENST00000617767 NCBP3Q53F19 620 aaKnown RBP7.59□□□□□ -1.19
CPNE4-214ENST00000617767 CDC42BPAQ5VT25 1732 aa7.59□□□□□ -1.19
CPNE4-214ENST00000617767 ABCA8O94911 1581 aa7.59□□□□□ -1.19
CPNE4-214ENST00000617767 DNMT1P26358 1616 aaKnown RBP7.59□□□□□ -1.19
CPNE4-214ENST00000617767 NCOA1Q15788 1441 aa7.59□□□□□ -1.2
CPNE4-214ENST00000617767 ANKRD30AQ9BXX3 1397 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 GCC2Q8IWJ2 1684 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 ARHGAP5Q13017 1502 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 AKNAQ7Z591 1439 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 ANKRD50Q9ULJ7 1429 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 AFAP1Q8N556 730 aa7.58□□□□□ -1.2
CPNE4-214ENST00000617767 C9orf84Q5VXU9 1444 aa7.57□□□□□ -1.2
CPNE4-214ENST00000617767 C11orf95C9JLR9 678 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-214ENST00000617767 RTL5Q5HYW3 569 aaPredicted RBP7.57□□□□□ -1.2
CPNE4-214ENST00000617767 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
CPNE4-214ENST00000617767 ANP32CO43423 234 aa7.57□□□□□ -1.2
CPNE4-214ENST00000617767 ITSN2Q9NZM3 1697 aa7.56□□□□□ -1.2
CPNE4-214ENST00000617767 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
CPNE4-214ENST00000617767 DCAF11Q8TEB1 546 aa7.56□□□□□ -1.2
CPNE4-214ENST00000617767 TTC37Q6PGP7 1564 aa7.55□□□□□ -1.2
CPNE4-214ENST00000617767 ANKRD30BQ9BXX2 1392 aa7.55□□□□□ -1.2
CPNE4-214ENST00000617767 SYCP2Q9BX26 1530 aa7.55□□□□□ -1.2
CPNE4-214ENST00000617767 ABCC10Q5T3U5 1492 aa7.55□□□□□ -1.2
CPNE4-214ENST00000617767 WASHC2AQ641Q2 1341 aa7.55□□□□□ -1.2
CPNE4-214ENST00000617767 ROCK1Q13464 1354 aa7.54□□□□□ -1.2
CPNE4-214ENST00000617767 CDC42BPBQ9Y5S2 1711 aa7.54□□□□□ -1.2
CPNE4-214ENST00000617767 RSPH6AQ9H0K4 717 aa7.53□□□□□ -1.2
CPNE4-214ENST00000617767 PZPP20742 1482 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms