RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
FAM228B-209ENST00000615135 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
FAM228B-209ENST00000615135 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
FAM228B-209ENST00000615135 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
FAM228B-209ENST00000615135 POGZQ7Z3K3 1410 aa12.46□□□□□ -0.41
FAM228B-209ENST00000615135 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
FAM228B-209ENST00000615135 IQSEC2Q5JU85 1478 aa12.46□□□□□ -0.42
FAM228B-209ENST00000615135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
FAM228B-209ENST00000615135 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
FAM228B-209ENST00000615135 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
FAM228B-209ENST00000615135 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
FAM228B-209ENST00000615135 GOLGA3Q08378 1498 aa12.44□□□□□ -0.42
FAM228B-209ENST00000615135 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
FAM228B-209ENST00000615135 FANCAO15360 1455 aa12.43□□□□□ -0.42
FAM228B-209ENST00000615135 ATP10BO94823 1461 aa12.43□□□□□ -0.42
FAM228B-209ENST00000615135 PTPRTO14522 1441 aa12.43□□□□□ -0.42
FAM228B-209ENST00000615135 FHOD3Q2V2M9 1422 aa12.43□□□□□ -0.42
FAM228B-209ENST00000615135 PREX1Q8TCU6 1659 aa12.42□□□□□ -0.42
FAM228B-209ENST00000615135 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
FAM228B-209ENST00000615135 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
FAM228B-209ENST00000615135 RICTORQ6R327 1708 aa12.4□□□□□ -0.42
FAM228B-209ENST00000615135 FKBP8Q14318 412 aa12.4□□□□□ -0.42
FAM228B-209ENST00000615135 DENND4BO75064 1496 aaPredicted RBP12.4□□□□□ -0.43
FAM228B-209ENST00000615135 SIGLEC1Q9BZZ2 1709 aa12.4□□□□□ -0.43
FAM228B-209ENST00000615135 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
FAM228B-209ENST00000615135 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
FAM228B-209ENST00000615135 FER1L4A9Z1Z3 1794 aa12.38□□□□□ -0.43
FAM228B-209ENST00000615135 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
FAM228B-209ENST00000615135 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
FAM228B-209ENST00000615135 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
FAM228B-209ENST00000615135 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
FAM228B-209ENST00000615135 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
FAM228B-209ENST00000615135 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
FAM228B-209ENST00000615135 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
FAM228B-209ENST00000615135 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
FAM228B-209ENST00000615135 MLECQ14165 292 aa12.32□□□□□ -0.44
FAM228B-209ENST00000615135 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
FAM228B-209ENST00000615135 FAM9AQ8IZU1 332 aaPredicted RBP12.31□□□□□ -0.44
FAM228B-209ENST00000615135 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
FAM228B-209ENST00000615135 CFAP74Q9C0B2 1584 aa12.29□□□□□ -0.44
FAM228B-209ENST00000615135 ATP10AO60312 1499 aa12.28□□□□□ -0.44
FAM228B-209ENST00000615135 HECW1Q76N89 1606 aa12.28□□□□□ -0.44
FAM228B-209ENST00000615135 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
FAM228B-209ENST00000615135 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
FAM228B-209ENST00000615135 MED1Q15648 1581 aaPredicted RBP12.26□□□□□ -0.45
FAM228B-209ENST00000615135 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
FAM228B-209ENST00000615135 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
FAM228B-209ENST00000615135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
FAM228B-209ENST00000615135 NUP153P49790 1475 aaKnown RBP12.21□□□□□ -0.45
FAM228B-209ENST00000615135 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
FAM228B-209ENST00000615135 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.45
FAM228B-209ENST00000615135 SCAPERQ9BY12 1400 aa12.2□□□□□ -0.46
FAM228B-209ENST00000615135 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
FAM228B-209ENST00000615135 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
FAM228B-209ENST00000615135 HSPA1LP34931 641 aa12.19□□□□□ -0.46
FAM228B-209ENST00000615135 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
FAM228B-209ENST00000615135 C3P01024 1663 aa12.19□□□□□ -0.46
FAM228B-209ENST00000615135 APLP2Q06481 763 aa12.18□□□□□ -0.46
FAM228B-209ENST00000615135 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
FAM228B-209ENST00000615135 PLCH2O75038 1416 aa12.17□□□□□ -0.46
FAM228B-209ENST00000615135 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
FAM228B-209ENST00000615135 CAPN15O75808 1086 aa12.15□□□□□ -0.46
FAM228B-209ENST00000615135 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.47
FAM228B-209ENST00000615135 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
FAM228B-209ENST00000615135 AGLP35573 1532 aa12.13□□□□□ -0.47
FAM228B-209ENST00000615135 PKD2Q13563 968 aa12.13□□□□□ -0.47
FAM228B-209ENST00000615135 NPATQ14207 1427 aa12.12□□□□□ -0.47
FAM228B-209ENST00000615135 KDM5CP41229 1560 aa12.12□□□□□ -0.47
FAM228B-209ENST00000615135 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
FAM228B-209ENST00000615135 CNTLNQ9NXG0 1405 aa12.11□□□□□ -0.47
FAM228B-209ENST00000615135 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
FAM228B-209ENST00000615135 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
FAM228B-209ENST00000615135 TOM1O60784 492 aa12.11□□□□□ -0.47
FAM228B-209ENST00000615135 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
FAM228B-209ENST00000615135 POLA2Q14181 598 aa12.1□□□□□ -0.47
FAM228B-209ENST00000615135 EFCAB2Q5VUJ9 269 aa12.1□□□□□ -0.47
FAM228B-209ENST00000615135 DIP2CQ9Y2E4 1556 aa12.09□□□□□ -0.47
FAM228B-209ENST00000615135 AFAP1Q8N556 730 aa12.08□□□□□ -0.48
FAM228B-209ENST00000615135 ESF1Q9H501 851 aaKnown RBP12.08□□□□□ -0.48
FAM228B-209ENST00000615135 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
FAM228B-209ENST00000615135 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
FAM228B-209ENST00000615135 RGS17Q9UGC6 210 aaPredicted RBP12.06□□□□□ -0.48
FAM228B-209ENST00000615135 ABCB7O75027 752 aa12.05□□□□□ -0.48
FAM228B-209ENST00000615135 CPS1P31327 1500 aa12.05□□□□□ -0.48
FAM228B-209ENST00000615135 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
FAM228B-209ENST00000615135 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
FAM228B-209ENST00000615135 ZMYM3Q14202 1370 aa12.04□□□□□ -0.48
FAM228B-209ENST00000615135 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
FAM228B-209ENST00000615135 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
FAM228B-209ENST00000615135 ALKQ9UM73 1620 aa12.03□□□□□ -0.48
FAM228B-209ENST00000615135 MYO5CQ9NQX4 1742 aa12.03□□□□□ -0.48
FAM228B-209ENST00000615135 PTPRKQ15262 1439 aa12.02□□□□□ -0.49
FAM228B-209ENST00000615135 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
FAM228B-209ENST00000615135 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
FAM228B-209ENST00000615135 MYO3AQ8NEV4 1616 aa11.98□□□□□ -0.49
FAM228B-209ENST00000615135 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
FAM228B-209ENST00000615135 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
FAM228B-209ENST00000615135 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
FAM228B-209ENST00000615135 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
FAM228B-209ENST00000615135 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms