RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 DCAF11Q8TEB1 546 aa19.11■□□□□ 0.65
SNPH-203ENST00000614659 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
SNPH-203ENST00000614659 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
SNPH-203ENST00000614659 RALBP1Q15311 655 aa19.1■□□□□ 0.65
SNPH-203ENST00000614659 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
SNPH-203ENST00000614659 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
SNPH-203ENST00000614659 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
SNPH-203ENST00000614659 PKD2Q13563 968 aa19.08■□□□□ 0.65
SNPH-203ENST00000614659 ARXQ96QS3 562 aa19.07■□□□□ 0.64
SNPH-203ENST00000614659 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
SNPH-203ENST00000614659 KIF3BO15066 747 aa19.06■□□□□ 0.64
SNPH-203ENST00000614659 WASHC2CQ9Y4E1 1318 aa19.06■□□□□ 0.64
SNPH-203ENST00000614659 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
SNPH-203ENST00000614659 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
SNPH-203ENST00000614659 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
SNPH-203ENST00000614659 CUX1P39880 1505 aa19.04■□□□□ 0.64
SNPH-203ENST00000614659 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
SNPH-203ENST00000614659 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
SNPH-203ENST00000614659 EIF3AQ14152 1382 aaKnown RBP19.02■□□□□ 0.64
SNPH-203ENST00000614659 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
SNPH-203ENST00000614659 NOP58Q9Y2X3 529 aaKnown RBP19.02■□□□□ 0.64
SNPH-203ENST00000614659 NUP155O75694 1391 aa19.02■□□□□ 0.63
SNPH-203ENST00000614659 AEBP2Q6ZN18 517 aaPredicted RBP19■□□□□ 0.63
SNPH-203ENST00000614659 CC2D1BQ5T0F9 858 aaKnown RBP19■□□□□ 0.63
SNPH-203ENST00000614659 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
SNPH-203ENST00000614659 IGF1RP08069 1367 aa18.98■□□□□ 0.63
SNPH-203ENST00000614659 CASC1Q6TDU7 716 aa18.97■□□□□ 0.63
SNPH-203ENST00000614659 HNRNPMP52272 730 aaKnown RBP eCLIP18.96■□□□□ 0.63
SNPH-203ENST00000614659 TRIM44Q96DX7 344 aaPredicted RBP18.96■□□□□ 0.63
SNPH-203ENST00000614659 UACAQ9BZF9 1416 aa18.96■□□□□ 0.62
SNPH-203ENST00000614659 CFTRP13569 1480 aa18.95■□□□□ 0.62
SNPH-203ENST00000614659 NPHP1O15259 732 aa18.95■□□□□ 0.62
SNPH-203ENST00000614659 PHLDB1Q86UU1 1377 aa18.95■□□□□ 0.62
SNPH-203ENST00000614659 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
SNPH-203ENST00000614659 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
SNPH-203ENST00000614659 B4GALNT3Q6L9W6 998 aa18.92■□□□□ 0.62
SNPH-203ENST00000614659 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
SNPH-203ENST00000614659 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
SNPH-203ENST00000614659 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
SNPH-203ENST00000614659 CHMP4AQ9BY43 222 aa18.9■□□□□ 0.62
SNPH-203ENST00000614659 NCLP19338 710 aaKnown RBP18.89■□□□□ 0.62
SNPH-203ENST00000614659 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
SNPH-203ENST00000614659 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
SNPH-203ENST00000614659 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNPH-203ENST00000614659 FOXD1Q16676 465 aa18.88■□□□□ 0.61
SNPH-203ENST00000614659 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
SNPH-203ENST00000614659 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
SNPH-203ENST00000614659 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
SNPH-203ENST00000614659 STK26Q9P289 416 aa18.87■□□□□ 0.61
SNPH-203ENST00000614659 TOP2BQ02880 1626 aa18.87■□□□□ 0.61
SNPH-203ENST00000614659 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
SNPH-203ENST00000614659 MYOM3Q5VTT5 1437 aa18.87■□□□□ 0.61
SNPH-203ENST00000614659 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
SNPH-203ENST00000614659 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
SNPH-203ENST00000614659 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
SNPH-203ENST00000614659 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
SNPH-203ENST00000614659 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
SNPH-203ENST00000614659 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
SNPH-203ENST00000614659 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
SNPH-203ENST00000614659 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
SNPH-203ENST00000614659 TERF2IPQ9NYB0 399 aa18.83■□□□□ 0.6
SNPH-203ENST00000614659 FRAT1Q92837 279 aaPredicted RBP18.82■□□□□ 0.6
SNPH-203ENST00000614659 U2SURPO15042 1029 aaKnown RBP18.82■□□□□ 0.6
SNPH-203ENST00000614659 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
SNPH-203ENST00000614659 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
SNPH-203ENST00000614659 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
SNPH-203ENST00000614659 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
SNPH-203ENST00000614659 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
SNPH-203ENST00000614659 RGS3P49796 1198 aa18.81■□□□□ 0.6
SNPH-203ENST00000614659 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
SNPH-203ENST00000614659 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
SNPH-203ENST00000614659 SYNJ2O15056 1496 aa18.8■□□□□ 0.6
SNPH-203ENST00000614659 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
SNPH-203ENST00000614659 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
SNPH-203ENST00000614659 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNPH-203ENST00000614659 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
SNPH-203ENST00000614659 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
SNPH-203ENST00000614659 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.59
SNPH-203ENST00000614659 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
SNPH-203ENST00000614659 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
SNPH-203ENST00000614659 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
SNPH-203ENST00000614659 NGDNQ8NEJ9 315 aaKnown RBP18.75■□□□□ 0.59
SNPH-203ENST00000614659 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
SNPH-203ENST00000614659 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
SNPH-203ENST00000614659 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
SNPH-203ENST00000614659 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
SNPH-203ENST00000614659 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
SNPH-203ENST00000614659 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
SNPH-203ENST00000614659 CCDC9Q9Y3X0 531 aaKnown RBP18.73■□□□□ 0.59
SNPH-203ENST00000614659 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
SNPH-203ENST00000614659 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
SNPH-203ENST00000614659 NESP48681 1621 aa18.72■□□□□ 0.59
SNPH-203ENST00000614659 NCOA2Q15596 1464 aa18.72■□□□□ 0.59
SNPH-203ENST00000614659 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
SNPH-203ENST00000614659 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
SNPH-203ENST00000614659 USP47Q96K76 1375 aa18.71■□□□□ 0.59
SNPH-203ENST00000614659 EHBP1L1Q8N3D4 1523 aa18.7■□□□□ 0.58
SNPH-203ENST00000614659 PMFBP1Q8TBY8 1022 aa18.7■□□□□ 0.58
SNPH-203ENST00000614659 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
SNPH-203ENST00000614659 SOX12O15370 315 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms