RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 MCCP23508 829 aa24.4■■□□□ 1.5
SREBF2-209ENST00000612482 SRPK2P78362 688 aaKnown RBP24.4■■□□□ 1.5
SREBF2-209ENST00000612482 SLKQ9H2G2 1235 aaPredicted RBP24.39■■□□□ 1.49
SREBF2-209ENST00000612482 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.49
SREBF2-209ENST00000612482 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
SREBF2-209ENST00000612482 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
SREBF2-209ENST00000612482 SOX12O15370 315 aa24.38■■□□□ 1.49
SREBF2-209ENST00000612482 PKD2Q13563 968 aa24.38■■□□□ 1.49
SREBF2-209ENST00000612482 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
SREBF2-209ENST00000612482 GZF1Q9H116 711 aaPredicted RBP24.37■■□□□ 1.49
SREBF2-209ENST00000612482 APBB1O00213 710 aa24.36■■□□□ 1.49
SREBF2-209ENST00000612482 DRC7Q8IY82 874 aa24.35■■□□□ 1.49
SREBF2-209ENST00000612482 ARHGAP35Q9NRY4 1499 aa24.34■■□□□ 1.49
SREBF2-209ENST00000612482 RAB3GAP2Q9H2M9 1393 aa24.33■■□□□ 1.48
SREBF2-209ENST00000612482 KANK1Q14678 1352 aa24.31■■□□□ 1.48
SREBF2-209ENST00000612482 GBP4Q96PP9 640 aa24.31■■□□□ 1.48
SREBF2-209ENST00000612482 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
SREBF2-209ENST00000612482 EIF4G1Q04637 1599 aaKnown RBP24.31■■□□□ 1.48
SREBF2-209ENST00000612482 CUX2O14529 1486 aa24.31■■□□□ 1.48
SREBF2-209ENST00000612482 IPO8O15397 1037 aaKnown RBP24.31■■□□□ 1.48
SREBF2-209ENST00000612482 RALBP1Q15311 655 aa24.3■■□□□ 1.48
SREBF2-209ENST00000612482 RWDD1Q9H446 243 aaPredicted RBP24.3■■□□□ 1.48
SREBF2-209ENST00000612482 ITPRIPQ8IWB1 547 aa24.28■■□□□ 1.48
SREBF2-209ENST00000612482 IPO9Q96P70 1041 aaKnown RBP24.28■■□□□ 1.48
SREBF2-209ENST00000612482 MPHOSPH9Q99550 1183 aa24.26■■□□□ 1.47
SREBF2-209ENST00000612482 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
SREBF2-209ENST00000612482 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.471e-6■■■■□ 25.8
SREBF2-209ENST00000612482 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
SREBF2-209ENST00000612482 GOLGA2Q08379 1002 aa24.25■■□□□ 1.47
SREBF2-209ENST00000612482 NPHP1O15259 732 aa24.25■■□□□ 1.47
SREBF2-209ENST00000612482 ROCK2O75116 1388 aaKnown RBP24.25■■□□□ 1.47
SREBF2-209ENST00000612482 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SREBF2-209ENST00000612482 RTF1Q92541 710 aaKnown RBP24.24■■□□□ 1.47
SREBF2-209ENST00000612482 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
SREBF2-209ENST00000612482 STK26Q9P289 416 aa24.22■■□□□ 1.47
SREBF2-209ENST00000612482 PTMSP20962 102 aa24.21■■□□□ 1.47
SREBF2-209ENST00000612482 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
SREBF2-209ENST00000612482 KIAA1211Q6ZU35 1233 aa24.21■■□□□ 1.47
SREBF2-209ENST00000612482 NACADO15069 1562 aa24.21■■□□□ 1.47
SREBF2-209ENST00000612482 ARID3AQ99856 593 aa24.19■■□□□ 1.46
SREBF2-209ENST00000612482 KIAA2012Q0VF49 1180 aa24.18■■□□□ 1.46
SREBF2-209ENST00000612482 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
SREBF2-209ENST00000612482 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
SREBF2-209ENST00000612482 GOLGA6L3A6NEY3 463 aa24.17■■□□□ 1.46
SREBF2-209ENST00000612482 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
SREBF2-209ENST00000612482 MLECQ14165 292 aa24.15■■□□□ 1.46
SREBF2-209ENST00000612482 NUP155O75694 1391 aa24.14■■□□□ 1.46
SREBF2-209ENST00000612482 GGT6Q6P531 493 aa24.14■■□□□ 1.46
SREBF2-209ENST00000612482 GNL2Q13823 731 aaKnown RBP24.13■■□□□ 1.45
SREBF2-209ENST00000612482 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
SREBF2-209ENST00000612482 CLUAP1Q96AJ1 413 aa24.13■■□□□ 1.45
SREBF2-209ENST00000612482 CALD1Q05682 793 aaKnown RBP24.12■■□□□ 1.45
SREBF2-209ENST00000612482 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
SREBF2-209ENST00000612482 SMC4Q9NTJ3 1288 aa24.12■■□□□ 1.45
SREBF2-209ENST00000612482 CCDC146Q8IYE0 955 aa24.11■■□□□ 1.45
SREBF2-209ENST00000612482 HDGFP51858 240 aaKnown RBP24.11■■□□□ 1.45
SREBF2-209ENST00000612482 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
SREBF2-209ENST00000612482 SYAP1Q96A49 352 aaPredicted RBP24.09■■□□□ 1.45
SREBF2-209ENST00000612482 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
SREBF2-209ENST00000612482 NLRP13Q86W25 1043 aa24.08■■□□□ 1.45
SREBF2-209ENST00000612482 FOXD4L1Q9NU39 408 aa24.07■■□□□ 1.44
SREBF2-209ENST00000612482 FMN1Q68DA7 1419 aa24.06■■□□□ 1.44
SREBF2-209ENST00000612482 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
SREBF2-209ENST00000612482 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
SREBF2-209ENST00000612482 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
SREBF2-209ENST00000612482 TRIM6-TRIM34B2RNG4 842 aa24.01■■□□□ 1.43
SREBF2-209ENST00000612482 HTATSF1O43719 755 aaKnown RBP24.01■■□□□ 1.43
SREBF2-209ENST00000612482 NOL8Q76FK4 1167 aaKnown RBP24■■□□□ 1.43
SREBF2-209ENST00000612482 STK31Q9BXU1 1019 aa23.99■■□□□ 1.43
SREBF2-209ENST00000612482 ISY1Q9ULR0 285 aaKnown RBP23.99■■□□□ 1.43
SREBF2-209ENST00000612482 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
SREBF2-209ENST00000612482 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
SREBF2-209ENST00000612482 CLSTN1O94985 981 aa23.96■■□□□ 1.43
SREBF2-209ENST00000612482 HMMRO75330 724 aa23.96■■□□□ 1.43
SREBF2-209ENST00000612482 SLC4A3P48751 1232 aa23.95■■□□□ 1.43
SREBF2-209ENST00000612482 PDE4AP27815 886 aa23.95■■□□□ 1.42
SREBF2-209ENST00000612482 SLC4A10Q6U841 1118 aa23.95■■□□□ 1.42
SREBF2-209ENST00000612482 ZNF330Q9Y3S2 320 aaPredicted RBP23.93■■□□□ 1.42
SREBF2-209ENST00000612482 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
SREBF2-209ENST00000612482 PLIN1O60240 522 aa23.92■■□□□ 1.42
SREBF2-209ENST00000612482 USP35Q9P2H5 1018 aa23.92■■□□□ 1.42
SREBF2-209ENST00000612482 MYBBP1AQ9BQG0 1328 aaKnown RBP23.91■■□□□ 1.42
SREBF2-209ENST00000612482 HSP90B1P14625 803 aaKnown RBP23.91■■□□□ 1.42
SREBF2-209ENST00000612482 KIF15Q9NS87 1388 aa23.91■■□□□ 1.42
SREBF2-209ENST00000612482 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
SREBF2-209ENST00000612482 FOXD4L5Q5VV16 416 aaPredicted RBP23.9■■□□□ 1.42
SREBF2-209ENST00000612482 FOXD4L4Q8WXT5 416 aaPredicted RBP23.9■■□□□ 1.42
SREBF2-209ENST00000612482 RRP7AQ9Y3A4 280 aaKnown RBP23.9■■□□□ 1.42
SREBF2-209ENST00000612482 TPM4P67936 248 aa23.9■■□□□ 1.42
SREBF2-209ENST00000612482 EXOC6Q8TAG9 804 aa23.9■■□□□ 1.42
SREBF2-209ENST00000612482 TERF2IPQ9NYB0 399 aa23.9■■□□□ 1.42
SREBF2-209ENST00000612482 CENPQQ7L2Z9 268 aaPredicted RBP23.89■■□□□ 1.42
SREBF2-209ENST00000612482 DHX57Q6P158 1386 aaKnown RBP23.89■■□□□ 1.42
SREBF2-209ENST00000612482 PHLDB1Q86UU1 1377 aa23.89■■□□□ 1.42
SREBF2-209ENST00000612482 GPATCH3Q96I76 525 aa23.89■■□□□ 1.42
SREBF2-209ENST00000612482 CARMIL2Q6F5E8 1435 aa23.89■■□□□ 1.41
SREBF2-209ENST00000612482 FAM161AQ3B820 660 aa23.89■■□□□ 1.41
SREBF2-209ENST00000612482 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
SREBF2-209ENST00000612482 ST18O60284 1047 aa23.88■■□□□ 1.41
SREBF2-209ENST00000612482 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.412e-7■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms