RNA–Protein interactions for RNA: ENST00000611717.4

PPP4R3B-203, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPP4R3B, Length 5,243 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-203ENST00000611717 CFTRP13569 1480 aa17.14■□□□□ 0.34
PPP4R3B-203ENST00000611717 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
PPP4R3B-203ENST00000611717 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■□□ 16.7
PPP4R3B-203ENST00000611717 MORC1Q86VD1 984 aa17.13■□□□□ 0.33
PPP4R3B-203ENST00000611717 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-203ENST00000611717 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
PPP4R3B-203ENST00000611717 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
PPP4R3B-203ENST00000611717 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3B-203ENST00000611717 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
PPP4R3B-203ENST00000611717 SENP3-EIF4A1A0A087X0R7 540 aa17.11■□□□□ 0.33
PPP4R3B-203ENST00000611717 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
PPP4R3B-203ENST00000611717 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
PPP4R3B-203ENST00000611717 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
PPP4R3B-203ENST00000611717 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
PPP4R3B-203ENST00000611717 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
PPP4R3B-203ENST00000611717 EID1Q9Y6B2 187 aa17.07■□□□□ 0.32
PPP4R3B-203ENST00000611717 ARXQ96QS3 562 aa17.06■□□□□ 0.32
PPP4R3B-203ENST00000611717 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
PPP4R3B-203ENST00000611717 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-203ENST00000611717 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
PPP4R3B-203ENST00000611717 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-203ENST00000611717 NESP48681 1621 aa17.03■□□□□ 0.32
PPP4R3B-203ENST00000611717 SOX12O15370 315 aa17.03■□□□□ 0.32
PPP4R3B-203ENST00000611717 MS4A1P11836 297 aa17.03■□□□□ 0.32
PPP4R3B-203ENST00000611717 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
PPP4R3B-203ENST00000611717 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
PPP4R3B-203ENST00000611717 CCDC144AA2RUR9 1427 aa17■□□□□ 0.31
PPP4R3B-203ENST00000611717 CUX1P39880 1505 aa16.99■□□□□ 0.31
PPP4R3B-203ENST00000611717 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
PPP4R3B-203ENST00000611717 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
PPP4R3B-203ENST00000611717 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
PPP4R3B-203ENST00000611717 RALBP1Q15311 655 aa16.98■□□□□ 0.31
PPP4R3B-203ENST00000611717 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
PPP4R3B-203ENST00000611717 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
PPP4R3B-203ENST00000611717 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
PPP4R3B-203ENST00000611717 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
PPP4R3B-203ENST00000611717 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
PPP4R3B-203ENST00000611717 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
PPP4R3B-203ENST00000611717 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
PPP4R3B-203ENST00000611717 KIF21BO75037 1637 aa16.96■□□□□ 0.3
PPP4R3B-203ENST00000611717 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
PPP4R3B-203ENST00000611717 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
PPP4R3B-203ENST00000611717 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
PPP4R3B-203ENST00000611717 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
PPP4R3B-203ENST00000611717 BECN1Q14457 450 aa16.93■□□□□ 0.3
PPP4R3B-203ENST00000611717 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 FAM69CQ0P6D2 419 aa16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 DDRGK1Q96HY6 314 aa16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
PPP4R3B-203ENST00000611717 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
PPP4R3B-203ENST00000611717 POLA1P09884 1462 aaPredicted RBP16.9■□□□□ 0.3
PPP4R3B-203ENST00000611717 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
PPP4R3B-203ENST00000611717 NPHP1O15259 732 aa16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
PPP4R3B-203ENST00000611717 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
PPP4R3B-203ENST00000611717 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
PPP4R3B-203ENST00000611717 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
PPP4R3B-203ENST00000611717 TRAK1Q9UPV9 953 aa16.87■□□□□ 0.29
PPP4R3B-203ENST00000611717 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
PPP4R3B-203ENST00000611717 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
PPP4R3B-203ENST00000611717 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3B-203ENST00000611717 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
PPP4R3B-203ENST00000611717 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
PPP4R3B-203ENST00000611717 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
PPP4R3B-203ENST00000611717 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.29
PPP4R3B-203ENST00000611717 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.29
PPP4R3B-203ENST00000611717 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
PPP4R3B-203ENST00000611717 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 ARHGAP5Q13017 1502 aa16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 IPO8O15397 1037 aaKnown RBP16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 RGS3P49796 1198 aa16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
PPP4R3B-203ENST00000611717 NLRP13Q86W25 1043 aa16.8■□□□□ 0.28
PPP4R3B-203ENST00000611717 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
PPP4R3B-203ENST00000611717 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
PPP4R3B-203ENST00000611717 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
PPP4R3B-203ENST00000611717 NCLP19338 710 aaKnown RBP16.78■□□□□ 0.28
PPP4R3B-203ENST00000611717 NBR1Q14596 966 aa16.78■□□□□ 0.28
PPP4R3B-203ENST00000611717 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
PPP4R3B-203ENST00000611717 GOLGA6L22H0YM25 854 aa16.76■□□□□ 0.27
PPP4R3B-203ENST00000611717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
PPP4R3B-203ENST00000611717 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
PPP4R3B-203ENST00000611717 AMPHP49418 695 aa16.76■□□□□ 0.27
PPP4R3B-203ENST00000611717 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
PPP4R3B-203ENST00000611717 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
PPP4R3B-203ENST00000611717 USP47Q96K76 1375 aa16.75■□□□□ 0.27
PPP4R3B-203ENST00000611717 PANK3Q9H999 370 aa16.73■□□□□ 0.27
PPP4R3B-203ENST00000611717 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
PPP4R3B-203ENST00000611717 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
PPP4R3B-203ENST00000611717 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
PPP4R3B-203ENST00000611717 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
PPP4R3B-203ENST00000611717 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
PPP4R3B-203ENST00000611717 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms