RNA–Protein interactions for RNA: ENST00000611717.4

PPP4R3B-203, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPP4R3B, Length 5,243 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-203ENST00000611717 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
PPP4R3B-203ENST00000611717 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
PPP4R3B-203ENST00000611717 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
PPP4R3B-203ENST00000611717 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
PPP4R3B-203ENST00000611717 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
PPP4R3B-203ENST00000611717 APLP2Q06481 763 aa20.76■□□□□ 0.91
PPP4R3B-203ENST00000611717 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
PPP4R3B-203ENST00000611717 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
PPP4R3B-203ENST00000611717 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
PPP4R3B-203ENST00000611717 TTBK1Q5TCY1 1321 aaPredicted RBP20.24■□□□□ 0.83
PPP4R3B-203ENST00000611717 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
PPP4R3B-203ENST00000611717 ABCC9O60706 1549 aa20.19■□□□□ 0.82
PPP4R3B-203ENST00000611717 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
PPP4R3B-203ENST00000611717 PCGF6Q9BYE7 350 aa20.06■□□□□ 0.8
PPP4R3B-203ENST00000611717 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
PPP4R3B-203ENST00000611717 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
PPP4R3B-203ENST00000611717 PELP1Q8IZL8 1130 aaKnown RBP19.8■□□□□ 0.76
PPP4R3B-203ENST00000611717 CCER1Q8TC90 406 aaPredicted RBP19.8■□□□□ 0.76
PPP4R3B-203ENST00000611717 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
PPP4R3B-203ENST00000611717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
PPP4R3B-203ENST00000611717 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
PPP4R3B-203ENST00000611717 PPARGC1BQ86YN6 1023 aaKnown RBP19.57■□□□□ 0.72
PPP4R3B-203ENST00000611717 CCDC180Q9P1Z9 1646 aa19.5■□□□□ 0.71
PPP4R3B-203ENST00000611717 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
PPP4R3B-203ENST00000611717 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
PPP4R3B-203ENST00000611717 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
PPP4R3B-203ENST00000611717 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
PPP4R3B-203ENST00000611717 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
PPP4R3B-203ENST00000611717 ITGAEP38570 1179 aa19.36■□□□□ 0.69
PPP4R3B-203ENST00000611717 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
PPP4R3B-203ENST00000611717 FBLN2P98095 1184 aa19.09■□□□□ 0.65
PPP4R3B-203ENST00000611717 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
PPP4R3B-203ENST00000611717 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
PPP4R3B-203ENST00000611717 NEFLP07196 543 aa19.02■□□□□ 0.64
PPP4R3B-203ENST00000611717 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
PPP4R3B-203ENST00000611717 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
PPP4R3B-203ENST00000611717 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PPP4R3B-203ENST00000611717 HRCP23327 699 aa18.96■□□□□ 0.63
PPP4R3B-203ENST00000611717 NACADO15069 1562 aa18.92■□□□□ 0.62
PPP4R3B-203ENST00000611717 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
PPP4R3B-203ENST00000611717 ERICH6Q7L0X2 663 aa18.83■□□□□ 0.61
PPP4R3B-203ENST00000611717 P3H3Q8IVL6 736 aa18.8■□□□□ 0.6
PPP4R3B-203ENST00000611717 CDK11AQ9UQ88 783 aaPredicted RBP18.71■□□□□ 0.59
PPP4R3B-203ENST00000611717 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
PPP4R3B-203ENST00000611717 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
PPP4R3B-203ENST00000611717 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
PPP4R3B-203ENST00000611717 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
PPP4R3B-203ENST00000611717 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
PPP4R3B-203ENST00000611717 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
PPP4R3B-203ENST00000611717 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
PPP4R3B-203ENST00000611717 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
PPP4R3B-203ENST00000611717 ZNF326Q5BKZ1 582 aaKnown RBP18.54■□□□□ 0.56
PPP4R3B-203ENST00000611717 DIEXFQ68CQ4 756 aaKnown RBP18.53■□□□□ 0.56
PPP4R3B-203ENST00000611717 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
PPP4R3B-203ENST00000611717 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
PPP4R3B-203ENST00000611717 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
PPP4R3B-203ENST00000611717 EEA1Q15075 1411 aa18.39■□□□□ 0.53
PPP4R3B-203ENST00000611717 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
PPP4R3B-203ENST00000611717 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
PPP4R3B-203ENST00000611717 ANP32CO43423 234 aa18.35■□□□□ 0.53
PPP4R3B-203ENST00000611717 BCANQ96GW7 911 aa18.35■□□□□ 0.53
PPP4R3B-203ENST00000611717 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
PPP4R3B-203ENST00000611717 CLIP1P30622 1438 aa18.31■□□□□ 0.52
PPP4R3B-203ENST00000611717 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
PPP4R3B-203ENST00000611717 MTUS2Q5JR59 1369 aa18.29■□□□□ 0.52
PPP4R3B-203ENST00000611717 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3B-203ENST00000611717 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
PPP4R3B-203ENST00000611717 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
PPP4R3B-203ENST00000611717 ERCC6Q03468 1493 aa18.26■□□□□ 0.51
PPP4R3B-203ENST00000611717 TSPY4P0CV99 314 aa18.21■□□□□ 0.51
PPP4R3B-203ENST00000611717 TSPY10P0CW01 314 aa18.21■□□□□ 0.51
PPP4R3B-203ENST00000611717 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
PPP4R3B-203ENST00000611717 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
PPP4R3B-203ENST00000611717 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
PPP4R3B-203ENST00000611717 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
PPP4R3B-203ENST00000611717 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
PPP4R3B-203ENST00000611717 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
PPP4R3B-203ENST00000611717 CEP162Q5TB80 1403 aa18.14■□□□□ 0.49
PPP4R3B-203ENST00000611717 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
PPP4R3B-203ENST00000611717 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
PPP4R3B-203ENST00000611717 NEFMP07197 916 aa18.12■□□□□ 0.49
PPP4R3B-203ENST00000611717 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
PPP4R3B-203ENST00000611717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.492e-8■■■□□ 14.7
PPP4R3B-203ENST00000611717 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
PPP4R3B-203ENST00000611717 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.48
PPP4R3B-203ENST00000611717 KCNH8Q96L42 1107 aa18.06■□□□□ 0.48
PPP4R3B-203ENST00000611717 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
PPP4R3B-203ENST00000611717 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
PPP4R3B-203ENST00000611717 CUX2O14529 1486 aa17.99■□□□□ 0.47
PPP4R3B-203ENST00000611717 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
PPP4R3B-203ENST00000611717 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
PPP4R3B-203ENST00000611717 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
PPP4R3B-203ENST00000611717 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
PPP4R3B-203ENST00000611717 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
PPP4R3B-203ENST00000611717 RRP7BPQ9NSQ0 103 aa17.95■□□□□ 0.46
PPP4R3B-203ENST00000611717 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
PPP4R3B-203ENST00000611717 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
PPP4R3B-203ENST00000611717 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
PPP4R3B-203ENST00000611717 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.46
PPP4R3B-203ENST00000611717 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms