RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 IGF1RP08069 1367 aa17.97■□□□□ 0.47
MUC1-223ENST00000611571 ZNF644Q9H582 1327 aaPredicted RBP17.97■□□□□ 0.47
MUC1-223ENST00000611571 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
MUC1-223ENST00000611571 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
MUC1-223ENST00000611571 CFAP53Q96M91 514 aa17.94■□□□□ 0.46
MUC1-223ENST00000611571 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
MUC1-223ENST00000611571 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
MUC1-223ENST00000611571 CLUAP1Q96AJ1 413 aa17.93■□□□□ 0.46
MUC1-223ENST00000611571 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
MUC1-223ENST00000611571 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
MUC1-223ENST00000611571 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
MUC1-223ENST00000611571 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
MUC1-223ENST00000611571 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
MUC1-223ENST00000611571 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
MUC1-223ENST00000611571 ZBTB7CA1YPR0 619 aa17.89■□□□□ 0.45
MUC1-223ENST00000611571 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
MUC1-223ENST00000611571 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
MUC1-223ENST00000611571 TRIM44Q96DX7 344 aaPredicted RBP17.88■□□□□ 0.45
MUC1-223ENST00000611571 RALBP1Q15311 655 aa17.87■□□□□ 0.45
MUC1-223ENST00000611571 SOX12O15370 315 aa17.87■□□□□ 0.45
MUC1-223ENST00000611571 MORC1Q86VD1 984 aa17.87■□□□□ 0.45
MUC1-223ENST00000611571 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
MUC1-223ENST00000611571 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
MUC1-223ENST00000611571 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
MUC1-223ENST00000611571 STK26Q9P289 416 aa17.86■□□□□ 0.45
MUC1-223ENST00000611571 PANK3Q9H999 370 aa17.86■□□□□ 0.45
MUC1-223ENST00000611571 PDE4AP27815 886 aa17.85■□□□□ 0.45
MUC1-223ENST00000611571 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
MUC1-223ENST00000611571 GGT6Q6P531 493 aa17.85■□□□□ 0.45
MUC1-223ENST00000611571 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
MUC1-223ENST00000611571 RRP7AQ9Y3A4 280 aaKnown RBP17.84■□□□□ 0.45
MUC1-223ENST00000611571 BCL2L13Q9BXK5 485 aa17.84■□□□□ 0.45
MUC1-223ENST00000611571 C14orf37Q86TY3 774 aa17.83■□□□□ 0.45
MUC1-223ENST00000611571 NAP1L5Q96NT1 182 aaPredicted RBP17.83■□□□□ 0.45
MUC1-223ENST00000611571 POGKQ9P215 609 aa17.83■□□□□ 0.45
MUC1-223ENST00000611571 APBB1O00213 710 aa17.82■□□□□ 0.44
MUC1-223ENST00000611571 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
MUC1-223ENST00000611571 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
MUC1-223ENST00000611571 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
MUC1-223ENST00000611571 CRBNQ96SW2 442 aa17.81■□□□□ 0.44
MUC1-223ENST00000611571 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
MUC1-223ENST00000611571 USP47Q96K76 1375 aa17.8■□□□□ 0.44
MUC1-223ENST00000611571 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
MUC1-223ENST00000611571 ANKRD30AQ9BXX3 1397 aa17.8■□□□□ 0.44
MUC1-223ENST00000611571 GOLGA2Q08379 1002 aa17.8■□□□□ 0.44
MUC1-223ENST00000611571 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
MUC1-223ENST00000611571 RRP1P56182 461 aaKnown RBP17.79■□□□□ 0.44
MUC1-223ENST00000611571 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
MUC1-223ENST00000611571 CDCA7LQ96GN5 454 aa17.78■□□□□ 0.44
MUC1-223ENST00000611571 CCDC7Q96M83 1385 aa17.77■□□□□ 0.44
MUC1-223ENST00000611571 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
MUC1-223ENST00000611571 FGD6Q6ZV73 1430 aa17.76■□□□□ 0.43
MUC1-223ENST00000611571 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
MUC1-223ENST00000611571 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
MUC1-223ENST00000611571 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
MUC1-223ENST00000611571 GLIPR1L2Q4G1C9 344 aa17.75■□□□□ 0.43
MUC1-223ENST00000611571 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
MUC1-223ENST00000611571 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
MUC1-223ENST00000611571 GOLGA6L22H0YM25 854 aa17.74■□□□□ 0.43
MUC1-223ENST00000611571 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
MUC1-223ENST00000611571 KIF3BO15066 747 aa17.73■□□□□ 0.43
MUC1-223ENST00000611571 APAF1O14727 1248 aa17.72■□□□□ 0.43
MUC1-223ENST00000611571 MLECQ14165 292 aa17.72■□□□□ 0.43
MUC1-223ENST00000611571 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
MUC1-223ENST00000611571 MFAP1P55081 439 aaKnown RBP17.72■□□□□ 0.43
MUC1-223ENST00000611571 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
MUC1-223ENST00000611571 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
MUC1-223ENST00000611571 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
MUC1-223ENST00000611571 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.43
MUC1-223ENST00000611571 TRAK1Q9UPV9 953 aa17.7■□□□□ 0.42
MUC1-223ENST00000611571 COG6Q9Y2V7 657 aa17.7■□□□□ 0.42
MUC1-223ENST00000611571 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
MUC1-223ENST00000611571 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
MUC1-223ENST00000611571 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
MUC1-223ENST00000611571 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
MUC1-223ENST00000611571 AKNAQ7Z591 1439 aa17.68■□□□□ 0.42
MUC1-223ENST00000611571 MSH5O43196 834 aa17.68■□□□□ 0.42
MUC1-223ENST00000611571 PDE3BQ13370 1112 aa17.68■□□□□ 0.42
MUC1-223ENST00000611571 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
MUC1-223ENST00000611571 PTMAP06454 111 aaKnown RBP17.67■□□□□ 0.42
MUC1-223ENST00000611571 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
MUC1-223ENST00000611571 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
MUC1-223ENST00000611571 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
MUC1-223ENST00000611571 PDS5BQ9NTI5 1447 aa17.66■□□□□ 0.42
MUC1-223ENST00000611571 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
MUC1-223ENST00000611571 DNTTIP2Q5QJE6 756 aaKnown RBP17.64■□□□□ 0.41
MUC1-223ENST00000611571 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
MUC1-223ENST00000611571 MYOM3Q5VTT5 1437 aa17.63■□□□□ 0.41
MUC1-223ENST00000611571 PRXQ9BXM0 1461 aa17.63■□□□□ 0.41
MUC1-223ENST00000611571 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
MUC1-223ENST00000611571 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
MUC1-223ENST00000611571 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
MUC1-223ENST00000611571 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
MUC1-223ENST00000611571 ARID3AQ99856 593 aa17.61■□□□□ 0.41
MUC1-223ENST00000611571 CFTRP13569 1480 aa17.61■□□□□ 0.41
MUC1-223ENST00000611571 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
MUC1-223ENST00000611571 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
MUC1-223ENST00000611571 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
MUC1-223ENST00000611571 CCDC144AA2RUR9 1427 aa17.59■□□□□ 0.41
MUC1-223ENST00000611571 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms