RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 PTPN23Q9H3S7 1636 aa33.66■■■□□ 2.98
UBE3C-209ENST00000611269 PLCH2O75038 1416 aa33.65■■■□□ 2.98
UBE3C-209ENST00000611269 FAM69CQ0P6D2 419 aa33.63■■■□□ 2.97
UBE3C-209ENST00000611269 ARHGAP5Q13017 1502 aa33.62■■■□□ 2.97
UBE3C-209ENST00000611269 FAM50AQ14320 339 aaKnown RBP33.61■■■□□ 2.97
UBE3C-209ENST00000611269 CD109Q6YHK3 1445 aa33.6■■■□□ 2.97
UBE3C-209ENST00000611269 MAP3K4Q9Y6R4 1608 aa33.6■■■□□ 2.97
UBE3C-209ENST00000611269 KIF13AQ9H1H9 1805 aa33.6■■■□□ 2.97
UBE3C-209ENST00000611269 ZNF777Q9ULD5 760 aaPredicted RBP33.59■■■□□ 2.97
UBE3C-209ENST00000611269 TCOF1Q13428 1488 aaKnown RBP33.58■■■□□ 2.97
UBE3C-209ENST00000611269 ARAP3Q8WWN8 1544 aa33.58■■■□□ 2.97
UBE3C-209ENST00000611269 ZNF644Q9H582 1327 aaPredicted RBP33.57■■■□□ 2.97
UBE3C-209ENST00000611269 CAMSAP2Q08AD1 1489 aa33.55■■■□□ 2.96
UBE3C-209ENST00000611269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.53■■■□□ 2.961e-6■□□□□ 9.9
UBE3C-209ENST00000611269 SAMD9LQ8IVG5 1584 aa33.52■■■□□ 2.96
UBE3C-209ENST00000611269 EFCAB2Q5VUJ9 269 aa33.51■■■□□ 2.96
UBE3C-209ENST00000611269 FANCAO15360 1455 aa33.5■■■□□ 2.95
UBE3C-209ENST00000611269 TSPOAP1O95153 1857 aa33.46■■■□□ 2.95
UBE3C-209ENST00000611269 ITGAEP38570 1179 aa33.44■■■□□ 2.94
UBE3C-209ENST00000611269 PPRC1Q5VV67 1664 aaKnown RBP33.41■■■□□ 2.94
UBE3C-209ENST00000611269 CFAP74Q9C0B2 1584 aa33.41■■■□□ 2.94
UBE3C-209ENST00000611269 SYCP2Q9BX26 1530 aa33.4■■■□□ 2.94
UBE3C-209ENST00000611269 ABCC1P33527 1531 aa33.39■■■□□ 2.94
UBE3C-209ENST00000611269 PLEKHH2Q8IVE3 1493 aa33.39■■■□□ 2.94
UBE3C-209ENST00000611269 TRHP20396 242 aaPredicted RBP33.38■■■□□ 2.93
UBE3C-209ENST00000611269 DNMT1P26358 1616 aaKnown RBP33.38■■■□□ 2.93
UBE3C-209ENST00000611269 HNRNPMP52272 730 aaKnown RBP eCLIP33.37■■■□□ 2.932e-8■■■■■ 28.8
UBE3C-209ENST00000611269 AKNAQ7Z591 1439 aa33.37■■■□□ 2.93
UBE3C-209ENST00000611269 KIAA1107Q9UPP5 1409 aa33.37■■■□□ 2.93
UBE3C-209ENST00000611269 MBD5Q9P267 1494 aa33.36■■■□□ 2.93
UBE3C-209ENST00000611269 ARHGEF12Q9NZN5 1544 aa33.36■■■□□ 2.93
UBE3C-209ENST00000611269 NEO1Q92859 1461 aa33.35■■■□□ 2.93
UBE3C-209ENST00000611269 DAPK1P53355 1430 aa33.34■■■□□ 2.93
UBE3C-209ENST00000611269 ADGRL1O94910 1474 aa33.34■■■□□ 2.93
UBE3C-209ENST00000611269 ABCC5O15440 1437 aa33.33■■■□□ 2.93
UBE3C-209ENST00000611269 ARHGEF5Q12774 1597 aa33.33■■■□□ 2.93
UBE3C-209ENST00000611269 PTPRKQ15262 1439 aa33.32■■■□□ 2.92
UBE3C-209ENST00000611269 TEX14Q8IWB6 1497 aa33.32■■■□□ 2.92
UBE3C-209ENST00000611269 CCER1Q8TC90 406 aaPredicted RBP33.3■■■□□ 2.92
UBE3C-209ENST00000611269 CROCC2H7BZ55 1655 aa33.28■■■□□ 2.92
UBE3C-209ENST00000611269 SCAPERQ9BY12 1400 aa33.28■■■□□ 2.92
UBE3C-209ENST00000611269 CCDC141Q6ZP82 1450 aa33.28■■■□□ 2.92
UBE3C-209ENST00000611269 TRAPPC8Q9Y2L5 1435 aa33.25■■■□□ 2.91
UBE3C-209ENST00000611269 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
UBE3C-209ENST00000611269 CHIC2Q9UKJ5 165 aa33.22■■■□□ 2.91
UBE3C-209ENST00000611269 SHANK2Q9UPX8 1470 aa33.19■■■□□ 2.9
UBE3C-209ENST00000611269 AFAP1Q8N556 730 aa33.18■■■□□ 2.9
UBE3C-209ENST00000611269 TSPY4P0CV99 314 aa33.18■■■□□ 2.9
UBE3C-209ENST00000611269 TSPY10P0CW01 314 aa33.18■■■□□ 2.9
UBE3C-209ENST00000611269 C9orf84Q5VXU9 1444 aa33.17■■■□□ 2.9
UBE3C-209ENST00000611269 POGZQ7Z3K3 1410 aa33.16■■■□□ 2.9
UBE3C-209ENST00000611269 DENND4BO75064 1496 aaPredicted RBP33.15■■■□□ 2.9
UBE3C-209ENST00000611269 ADGBQ8N7X0 1667 aa33.14■■■□□ 2.9
UBE3C-209ENST00000611269 ZNF518AQ6AHZ1 1483 aa33.14■■■□□ 2.9
UBE3C-209ENST00000611269 MAST1Q9Y2H9 1570 aa33.12■■■□□ 2.89
UBE3C-209ENST00000611269 RICTORQ6R327 1708 aa33.11■■■□□ 2.89
UBE3C-209ENST00000611269 RAPGEF3O95398 923 aa33.1■■■□□ 2.89
UBE3C-209ENST00000611269 ROCK1Q13464 1354 aa33.1■■■□□ 2.89
UBE3C-209ENST00000611269 ADGRL2O95490 1459 aa33.09■■■□□ 2.89
UBE3C-209ENST00000611269 RRP7BPQ9NSQ0 103 aa33.09■■■□□ 2.89
UBE3C-209ENST00000611269 KDM5CP41229 1560 aa33.08■■■□□ 2.89
UBE3C-209ENST00000611269 SPAG9O60271 1321 aaKnown RBP33.08■■■□□ 2.89
UBE3C-209ENST00000611269 NCOA1Q15788 1441 aa33.07■■■□□ 2.88
UBE3C-209ENST00000611269 FRMPD1Q5SYB0 1578 aa33.06■■■□□ 2.88
UBE3C-209ENST00000611269 ANKRD30AQ9BXX3 1397 aa33.05■■■□□ 2.88
UBE3C-209ENST00000611269 HFM1A2PYH4 1435 aa33.05■■■□□ 2.88
UBE3C-209ENST00000611269 ZFYVE16Q7Z3T8 1539 aa33.05■■■□□ 2.88
UBE3C-209ENST00000611269 COL17A1Q9UMD9 1497 aaPredicted RBP33.04■■■□□ 2.88
UBE3C-209ENST00000611269 INO80Q9ULG1 1556 aaPredicted RBP33.04■■■□□ 2.88
UBE3C-209ENST00000611269 NAIPQ13075 1403 aa33.03■■■□□ 2.88
UBE3C-209ENST00000611269 ATP7AQ04656 1500 aa33.02■■■□□ 2.88
UBE3C-209ENST00000611269 RTEL1-TNFRSF6BF6WH68 1400 aa33.02■■■□□ 2.88
UBE3C-209ENST00000611269 GCC2Q8IWJ2 1684 aa33.01■■■□□ 2.88
UBE3C-209ENST00000611269 PLXNC1O60486 1568 aa33■■■□□ 2.87
UBE3C-209ENST00000611269 SETD5Q9C0A6 1442 aa32.99■■■□□ 2.87
UBE3C-209ENST00000611269 HECW2Q9P2P5 1572 aa32.99■■■□□ 2.87
UBE3C-209ENST00000611269 KIDINS220Q9ULH0 1771 aa32.99■■■□□ 2.87
UBE3C-209ENST00000611269 MYT1LQ9UL68 1186 aa32.98■■■□□ 2.87
UBE3C-209ENST00000611269 MLH3Q9UHC1 1453 aa32.97■■■□□ 2.87
UBE3C-209ENST00000611269 KIF15Q9NS87 1388 aa32.96■■■□□ 2.87
UBE3C-209ENST00000611269 ZMYM4Q5VZL5 1548 aa32.95■■■□□ 2.86
UBE3C-209ENST00000611269 RAB3GAP2Q9H2M9 1393 aa32.93■■■□□ 2.86
UBE3C-209ENST00000611269 KDM6BO15054 1643 aa32.9■■■□□ 2.86
UBE3C-209ENST00000611269 ABCA6Q8N139 1617 aa32.87■■■□□ 2.85
UBE3C-209ENST00000611269 ANKRD50Q9ULJ7 1429 aa32.87■■■□□ 2.85
UBE3C-209ENST00000611269 DUOX2Q9NRD8 1548 aa32.86■■■□□ 2.85
UBE3C-209ENST00000611269 YEATS2Q9ULM3 1422 aa32.84■■■□□ 2.85
UBE3C-209ENST00000611269 MAGI2Q86UL8 1455 aa32.84■■■□□ 2.85
UBE3C-209ENST00000611269 DIP2CQ9Y2E4 1556 aa32.82■■■□□ 2.85
UBE3C-209ENST00000611269 ERBINQ96RT1 1412 aa32.78■■■□□ 2.84
UBE3C-209ENST00000611269 A2MP01023 1474 aa32.76■■■□□ 2.84
UBE3C-209ENST00000611269 DHX29Q7Z478 1369 aaKnown RBP32.76■■■□□ 2.83
UBE3C-209ENST00000611269 ARHGEF40Q8TER5 1519 aa32.74■■■□□ 2.83
UBE3C-209ENST00000611269 CLSPNQ9HAW4 1339 aa32.71■■■□□ 2.83
UBE3C-209ENST00000611269 ATP10AO60312 1499 aa32.7■■■□□ 2.83
UBE3C-209ENST00000611269 EIF2AK4Q9P2K8 1649 aaKnown RBP32.68■■■□□ 2.82
UBE3C-209ENST00000611269 DHX57Q6P158 1386 aaKnown RBP32.67■■■□□ 2.82
UBE3C-209ENST00000611269 TRIM52Q96A61 297 aa32.65■■■□□ 2.82
UBE3C-209ENST00000611269 REREQ9P2R6 1566 aa32.63■■■□□ 2.81
UBE3C-209ENST00000611269 KIF3BO15066 747 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms