RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 HDGFL2Q7Z4V5 671 aaPredicted RBP20.11■□□□□ 0.81
TNXB-208ENST00000611016 KANK4Q5T7N3 995 aaPredicted RBP20.1■□□□□ 0.81
TNXB-208ENST00000611016 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
TNXB-208ENST00000611016 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
TNXB-208ENST00000611016 FGD1P98174 961 aa20.08■□□□□ 0.8
TNXB-208ENST00000611016 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
TNXB-208ENST00000611016 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
TNXB-208ENST00000611016 KCNJ4P48050 445 aa20.07■□□□□ 0.8
TNXB-208ENST00000611016 NUP155O75694 1391 aa20.06■□□□□ 0.8
TNXB-208ENST00000611016 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
TNXB-208ENST00000611016 KIF3BO15066 747 aa20.05■□□□□ 0.8
TNXB-208ENST00000611016 CSB-PGBD3P0DP91 1061 aa20.04■□□□□ 0.8
TNXB-208ENST00000611016 NAP1L2Q9ULW6 460 aaPredicted RBP20.04■□□□□ 0.8
TNXB-208ENST00000611016 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
TNXB-208ENST00000611016 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
TNXB-208ENST00000611016 ANKRD30AQ9BXX3 1397 aa20.02■□□□□ 0.8
TNXB-208ENST00000611016 MPHOSPH9Q99550 1183 aa20.02■□□□□ 0.79
TNXB-208ENST00000611016 ROCK2O75116 1388 aaKnown RBP20.01■□□□□ 0.79
TNXB-208ENST00000611016 PTMAP06454 111 aaKnown RBP20■□□□□ 0.79
TNXB-208ENST00000611016 GOLGA6L6A8MZA4 724 aa19.99■□□□□ 0.79
TNXB-208ENST00000611016 KTN1Q86UP2 1357 aaKnown RBP19.98■□□□□ 0.79
TNXB-208ENST00000611016 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
TNXB-208ENST00000611016 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
TNXB-208ENST00000611016 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
TNXB-208ENST00000611016 CCER2I3L3R5 266 aa19.96■□□□□ 0.79
TNXB-208ENST00000611016 ZNF330Q9Y3S2 320 aaPredicted RBP19.96■□□□□ 0.79
TNXB-208ENST00000611016 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
TNXB-208ENST00000611016 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
TNXB-208ENST00000611016 EID1Q9Y6B2 187 aa19.95■□□□□ 0.78
TNXB-208ENST00000611016 WASHC2CQ9Y4E1 1318 aa19.95■□□□□ 0.78
TNXB-208ENST00000611016 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
TNXB-208ENST00000611016 SPAG9O60271 1321 aaKnown RBP19.95■□□□□ 0.78
TNXB-208ENST00000611016 B4GALNT3Q6L9W6 998 aa19.94■□□□□ 0.78
TNXB-208ENST00000611016 CCDC9Q9Y3X0 531 aaKnown RBP19.93■□□□□ 0.78
TNXB-208ENST00000611016 NRDCO43847 1150 aa19.92■□□□□ 0.78
TNXB-208ENST00000611016 JPH4Q96JJ6 628 aa19.92■□□□□ 0.78
TNXB-208ENST00000611016 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
TNXB-208ENST00000611016 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
TNXB-208ENST00000611016 APBB1O00213 710 aa19.9■□□□□ 0.78
TNXB-208ENST00000611016 PLCB2Q00722 1185 aa19.89■□□□□ 0.77
TNXB-208ENST00000611016 EIF3AQ14152 1382 aaKnown RBP19.89■□□□□ 0.77
TNXB-208ENST00000611016 WIZO95785 1651 aa19.88■□□□□ 0.77
TNXB-208ENST00000611016 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
TNXB-208ENST00000611016 ISY1Q9ULR0 285 aaKnown RBP19.88■□□□□ 0.77
TNXB-208ENST00000611016 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
TNXB-208ENST00000611016 IPO8O15397 1037 aaKnown RBP19.87■□□□□ 0.77
TNXB-208ENST00000611016 MCCP23508 829 aa19.87■□□□□ 0.77
TNXB-208ENST00000611016 CALD1Q05682 793 aaKnown RBP19.87■□□□□ 0.77
TNXB-208ENST00000611016 NGDNQ8NEJ9 315 aaKnown RBP19.86■□□□□ 0.77
TNXB-208ENST00000611016 CHMP4AQ9BY43 222 aa19.86■□□□□ 0.77
TNXB-208ENST00000611016 RSPH4AQ5TD94 716 aa19.85■□□□□ 0.77
TNXB-208ENST00000611016 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
TNXB-208ENST00000611016 DNTTIP2Q5QJE6 756 aaKnown RBP19.84■□□□□ 0.77
TNXB-208ENST00000611016 NUTM2FA1L443 756 aa19.84■□□□□ 0.77
TNXB-208ENST00000611016 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
TNXB-208ENST00000611016 CCDC18Q5T9S5 1454 aa19.83■□□□□ 0.77
TNXB-208ENST00000611016 RALBP1Q15311 655 aa19.83■□□□□ 0.76
TNXB-208ENST00000611016 PTMSP20962 102 aa19.83■□□□□ 0.76
TNXB-208ENST00000611016 HSCBQ8IWL3 235 aa19.82■□□□□ 0.76
TNXB-208ENST00000611016 GOLGA6L4A6NEF3 574 aa19.81■□□□□ 0.76
TNXB-208ENST00000611016 ITPRIPQ8IWB1 547 aa19.8■□□□□ 0.76
TNXB-208ENST00000611016 CYB5RLQ6IPT4 315 aa19.8■□□□□ 0.76
TNXB-208ENST00000611016 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
TNXB-208ENST00000611016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.78■□□□□ 0.76
TNXB-208ENST00000611016 LTV1Q96GA3 475 aaPredicted RBP19.78■□□□□ 0.76
TNXB-208ENST00000611016 AMPHP49418 695 aa19.78■□□□□ 0.76
TNXB-208ENST00000611016 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
TNXB-208ENST00000611016 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
TNXB-208ENST00000611016 L1TD1Q5T7N2 865 aaKnown RBP19.77■□□□□ 0.76
TNXB-208ENST00000611016 SPRYD3Q8NCJ5 442 aa19.77■□□□□ 0.75
TNXB-208ENST00000611016 TMX4Q9H1E5 349 aaPredicted RBP19.76■□□□□ 0.75
TNXB-208ENST00000611016 KIAA1211Q6ZU35 1233 aa19.76■□□□□ 0.75
TNXB-208ENST00000611016 CHMP3Q9Y3E7 222 aa19.75■□□□□ 0.75
TNXB-208ENST00000611016 RCAN3Q9UKA8 241 aa19.74■□□□□ 0.75
TNXB-208ENST00000611016 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
TNXB-208ENST00000611016 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
TNXB-208ENST00000611016 CLSTN1O94985 981 aa19.72■□□□□ 0.75
TNXB-208ENST00000611016 GNL2Q13823 731 aaKnown RBP19.72■□□□□ 0.75
TNXB-208ENST00000611016 FANCD2Q9BXW9 1451 aa19.72■□□□□ 0.75
TNXB-208ENST00000611016 GORABQ5T7V8 394 aa19.72■□□□□ 0.75
TNXB-208ENST00000611016 PTPRGP23470 1445 aa19.71■□□□□ 0.75
TNXB-208ENST00000611016 TAF7LQ5H9L4 462 aa19.71■□□□□ 0.75
TNXB-208ENST00000611016 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
TNXB-208ENST00000611016 CHAF1AQ13111 956 aaPredicted RBP19.71■□□□□ 0.75
TNXB-208ENST00000611016 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
TNXB-208ENST00000611016 HDAC5Q9UQL6 1122 aa19.69■□□□□ 0.74
TNXB-208ENST00000611016 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
TNXB-208ENST00000611016 SLC4A10Q6U841 1118 aa19.68■□□□□ 0.74
TNXB-208ENST00000611016 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
TNXB-208ENST00000611016 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
TNXB-208ENST00000611016 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
TNXB-208ENST00000611016 NAP1L5Q96NT1 182 aaPredicted RBP19.64■□□□□ 0.73
TNXB-208ENST00000611016 G3V3G9 751 aa19.63■□□□□ 0.73
TNXB-208ENST00000611016 DCAF8Q5TAQ9 597 aa19.63■□□□□ 0.73
TNXB-208ENST00000611016 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
TNXB-208ENST00000611016 VGFO15240 615 aaPredicted RBP19.62■□□□□ 0.73
TNXB-208ENST00000611016 GPATCH3Q96I76 525 aa19.62■□□□□ 0.73
TNXB-208ENST00000611016 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
TNXB-208ENST00000611016 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
TNXB-208ENST00000611016 GBP4Q96PP9 640 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms