RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
TNXB-208ENST00000611016 NISCHQ9Y2I1 1504 aa25.95■■□□□ 1.75
TNXB-208ENST00000611016 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
TNXB-208ENST00000611016 SHROOM4Q9ULL8 1493 aa25.54■■□□□ 1.68
TNXB-208ENST00000611016 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
TNXB-208ENST00000611016 APLP2Q06481 763 aa24.7■■□□□ 1.55
TNXB-208ENST00000611016 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
TNXB-208ENST00000611016 FAM9AQ8IZU1 332 aaPredicted RBP24.51■■□□□ 1.51
TNXB-208ENST00000611016 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
TNXB-208ENST00000611016 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
TNXB-208ENST00000611016 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
TNXB-208ENST00000611016 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
TNXB-208ENST00000611016 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
TNXB-208ENST00000611016 UBTFP17480 764 aaKnown RBP23.8■■□□□ 1.4
TNXB-208ENST00000611016 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
TNXB-208ENST00000611016 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
TNXB-208ENST00000611016 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
TNXB-208ENST00000611016 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
TNXB-208ENST00000611016 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
TNXB-208ENST00000611016 MYT1LQ9UL68 1186 aa23.25■■□□□ 1.31
TNXB-208ENST00000611016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
TNXB-208ENST00000611016 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
TNXB-208ENST00000611016 NEFLP07196 543 aa23.09■■□□□ 1.29
TNXB-208ENST00000611016 ITGAEP38570 1179 aa23.08■■□□□ 1.29
TNXB-208ENST00000611016 MYT1Q01538 1121 aa23.05■■□□□ 1.28
TNXB-208ENST00000611016 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
TNXB-208ENST00000611016 POLR3GLQ9BT43 218 aa22.91■■□□□ 1.26
TNXB-208ENST00000611016 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
TNXB-208ENST00000611016 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
TNXB-208ENST00000611016 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
TNXB-208ENST00000611016 ABCC9O60706 1549 aa22.81■■□□□ 1.24
TNXB-208ENST00000611016 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
TNXB-208ENST00000611016 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
TNXB-208ENST00000611016 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
TNXB-208ENST00000611016 HRCP23327 699 aa22.51■■□□□ 1.19
TNXB-208ENST00000611016 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
TNXB-208ENST00000611016 DAXXQ9UER7 740 aaPredicted RBP22.45■■□□□ 1.19
TNXB-208ENST00000611016 FBLN2P98095 1184 aa22.42■■□□□ 1.18
TNXB-208ENST00000611016 TRIM52Q96A61 297 aa22.39■■□□□ 1.17
TNXB-208ENST00000611016 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
TNXB-208ENST00000611016 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
TNXB-208ENST00000611016 ARID3CA6NKF2 412 aa22.09■■□□□ 1.13
TNXB-208ENST00000611016 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
TNXB-208ENST00000611016 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
TNXB-208ENST00000611016 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
TNXB-208ENST00000611016 BCANQ96GW7 911 aa21.98■■□□□ 1.11
TNXB-208ENST00000611016 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
TNXB-208ENST00000611016 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.1
TNXB-208ENST00000611016 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
TNXB-208ENST00000611016 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
TNXB-208ENST00000611016 CSRNP3Q8WYN3 585 aa21.84■■□□□ 1.09
TNXB-208ENST00000611016 ANP32CO43423 234 aa21.82■■□□□ 1.08
TNXB-208ENST00000611016 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
TNXB-208ENST00000611016 CDK11AQ9UQ88 783 aaPredicted RBP21.76■■□□□ 1.07
TNXB-208ENST00000611016 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
TNXB-208ENST00000611016 ZBTB47Q9UFB7 747 aaPredicted RBP21.73■■□□□ 1.07
TNXB-208ENST00000611016 NEFMP07197 916 aa21.68■■□□□ 1.06
TNXB-208ENST00000611016 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
TNXB-208ENST00000611016 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
TNXB-208ENST00000611016 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
TNXB-208ENST00000611016 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.06
TNXB-208ENST00000611016 CHGAP10645 457 aaKnown RBP21.61■■□□□ 1.05
TNXB-208ENST00000611016 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
TNXB-208ENST00000611016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.02
TNXB-208ENST00000611016 GTF3C3Q9Y5Q9 886 aa21.4■■□□□ 1.02
TNXB-208ENST00000611016 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
TNXB-208ENST00000611016 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
TNXB-208ENST00000611016 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
TNXB-208ENST00000611016 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
TNXB-208ENST00000611016 TSPY4P0CV99 314 aa21.27■■□□□ 1
TNXB-208ENST00000611016 TSPY10P0CW01 314 aa21.27■■□□□ 1
TNXB-208ENST00000611016 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
TNXB-208ENST00000611016 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
TNXB-208ENST00000611016 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
TNXB-208ENST00000611016 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
TNXB-208ENST00000611016 KCNH8Q96L42 1107 aa21.16■□□□□ 0.98
TNXB-208ENST00000611016 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
TNXB-208ENST00000611016 FAM9BQ8IZU0 186 aa21.16■□□□□ 0.98
TNXB-208ENST00000611016 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
TNXB-208ENST00000611016 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
TNXB-208ENST00000611016 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
TNXB-208ENST00000611016 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
TNXB-208ENST00000611016 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
TNXB-208ENST00000611016 NPM2Q86SE8 214 aaKnown RBP21.11■□□□□ 0.97
TNXB-208ENST00000611016 HNRNPUQ00839 825 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNXB-208ENST00000611016 DCAF1Q9Y4B6 1507 aa21.07■□□□□ 0.96
TNXB-208ENST00000611016 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
TNXB-208ENST00000611016 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
TNXB-208ENST00000611016 PLEKHD1A6NEE1 506 aa21.02■□□□□ 0.96
TNXB-208ENST00000611016 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
TNXB-208ENST00000611016 CLIP1P30622 1438 aa21.01■□□□□ 0.95
TNXB-208ENST00000611016 PLEKHG5O94827 1062 aa21.01■□□□□ 0.95
TNXB-208ENST00000611016 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
TNXB-208ENST00000611016 A0A0G2JS52 829 aa21■□□□□ 0.95
TNXB-208ENST00000611016 FKBP8Q14318 412 aa21■□□□□ 0.95
TNXB-208ENST00000611016 ANP32BQ92688 251 aaKnown RBP20.99■□□□□ 0.95
TNXB-208ENST00000611016 UPF2Q9HAU5 1272 aaKnown RBP20.99■□□□□ 0.95
TNXB-208ENST00000611016 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
TNXB-208ENST00000611016 HSP90AA1P07900 732 aaKnown RBP20.97■□□□□ 0.95
TNXB-208ENST00000611016 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms