RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 CARD11Q9BXL7 1154 aa8.72□□□□□ -1.01
RPF2-204ENST00000607388 PRXQ9BXM0 1461 aa8.72□□□□□ -1.01
RPF2-204ENST00000607388 ABCA10Q8WWZ4 1543 aa8.71□□□□□ -1.01
RPF2-204ENST00000607388 PRDM2Q13029 1718 aa8.71□□□□□ -1.02
RPF2-204ENST00000607388 DCAF11Q8TEB1 546 aa8.71□□□□□ -1.02
RPF2-204ENST00000607388 CYB5RLQ6IPT4 315 aa8.71□□□□□ -1.02
RPF2-204ENST00000607388 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
RPF2-204ENST00000607388 AKNAQ7Z591 1439 aa8.7□□□□□ -1.02
RPF2-204ENST00000607388 RGS3P49796 1198 aa8.7□□□□□ -1.02
RPF2-204ENST00000607388 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
RPF2-204ENST00000607388 PKD2Q13563 968 aa8.69□□□□□ -1.02
RPF2-204ENST00000607388 CFDP1Q9UEE9 299 aaPredicted RBP8.69□□□□□ -1.02
RPF2-204ENST00000607388 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
RPF2-204ENST00000607388 CCDC18Q5T9S5 1454 aa8.69□□□□□ -1.02
RPF2-204ENST00000607388 EXOC6Q8TAG9 804 aa8.68□□□□□ -1.02
RPF2-204ENST00000607388 MAPKBP1O60336 1514 aa8.68□□□□□ -1.02
RPF2-204ENST00000607388 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
RPF2-204ENST00000607388 EIF4G3O43432 1585 aaKnown RBP8.68□□□□□ -1.02
RPF2-204ENST00000607388 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
RPF2-204ENST00000607388 TNNT2P45379 298 aaPredicted RBP8.68□□□□□ -1.02
RPF2-204ENST00000607388 TARBP1Q13395 1621 aaKnown RBP8.67□□□□□ -1.02
RPF2-204ENST00000607388 NEFMP07197 916 aa8.67□□□□□ -1.02
RPF2-204ENST00000607388 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
RPF2-204ENST00000607388 CDCA7LQ96GN5 454 aa8.66□□□□□ -1.02
RPF2-204ENST00000607388 KIF7Q2M1P5 1343 aa8.66□□□□□ -1.02
RPF2-204ENST00000607388 ST20-MTHFSA0A0A6YYL1 179 aa8.66□□□□□ -1.02
RPF2-204ENST00000607388 PTPRKQ15262 1439 aa8.65□□□□□ -1.03
RPF2-204ENST00000607388 CHGAP10645 457 aaKnown RBP8.64□□□□□ -1.03
RPF2-204ENST00000607388 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
RPF2-204ENST00000607388 FGD6Q6ZV73 1430 aa8.63□□□□□ -1.03
RPF2-204ENST00000607388 SPRYD3Q8NCJ5 442 aa8.63□□□□□ -1.03
RPF2-204ENST00000607388 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
RPF2-204ENST00000607388 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
RPF2-204ENST00000607388 TIMELESSQ9UNS1 1208 aa8.62□□□□□ -1.03
RPF2-204ENST00000607388 HNRNPMP52272 730 aaKnown RBP eCLIP8.62□□□□□ -1.03
RPF2-204ENST00000607388 TSPY4P0CV99 314 aa8.61□□□□□ -1.03
RPF2-204ENST00000607388 TSPY10P0CW01 314 aa8.61□□□□□ -1.03
RPF2-204ENST00000607388 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
RPF2-204ENST00000607388 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
RPF2-204ENST00000607388 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
RPF2-204ENST00000607388 SYNJ2O15056 1496 aa8.6□□□□□ -1.03
RPF2-204ENST00000607388 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
RPF2-204ENST00000607388 GRIN2AQ12879 1464 aa8.6□□□□□ -1.03
RPF2-204ENST00000607388 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
RPF2-204ENST00000607388 RCAN3Q9UKA8 241 aa8.59□□□□□ -1.03
RPF2-204ENST00000607388 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
RPF2-204ENST00000607388 IPO9Q96P70 1041 aaKnown RBP8.58□□□□□ -1.04
RPF2-204ENST00000607388 ABCA5Q8WWZ7 1642 aa8.58□□□□□ -1.04
RPF2-204ENST00000607388 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
RPF2-204ENST00000607388 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
RPF2-204ENST00000607388 FRAT1Q92837 279 aaPredicted RBP8.58□□□□□ -1.04
RPF2-204ENST00000607388 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
RPF2-204ENST00000607388 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
RPF2-204ENST00000607388 NUP155O75694 1391 aa8.57□□□□□ -1.04
RPF2-204ENST00000607388 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
RPF2-204ENST00000607388 UACAQ9BZF9 1416 aa8.57□□□□□ -1.04
RPF2-204ENST00000607388 PCF11O94913 1555 aaKnown RBP8.56□□□□□ -1.04
RPF2-204ENST00000607388 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
RPF2-204ENST00000607388 ERICH3Q5RHP9 1530 aa8.56□□□□□ -1.04
RPF2-204ENST00000607388 NAIPQ13075 1403 aa8.56□□□□□ -1.04
RPF2-204ENST00000607388 WDR43Q15061 677 aaKnown RBP eCLIP8.56□□□□□ -1.04
RPF2-204ENST00000607388 CRBNQ96SW2 442 aa8.56□□□□□ -1.04
RPF2-204ENST00000607388 TRHP20396 242 aaPredicted RBP8.55□□□□□ -1.04
RPF2-204ENST00000607388 PDE4AP27815 886 aa8.55□□□□□ -1.04
RPF2-204ENST00000607388 USP47Q96K76 1375 aa8.55□□□□□ -1.04
RPF2-204ENST00000607388 SLKQ9H2G2 1235 aaPredicted RBP8.55□□□□□ -1.04
RPF2-204ENST00000607388 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
RPF2-204ENST00000607388 PLEKHD1A6NEE1 506 aa8.54□□□□□ -1.04
RPF2-204ENST00000607388 SAFB2Q14151 953 aaKnown RBP eCLIP8.54□□□□□ -1.04
RPF2-204ENST00000607388 PBRM1Q86U86 1689 aa8.54□□□□□ -1.04
RPF2-204ENST00000607388 C20orf194Q5TEA3 1177 aa8.54□□□□□ -1.04
RPF2-204ENST00000607388 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
RPF2-204ENST00000607388 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
RPF2-204ENST00000607388 CNTLNQ9NXG0 1405 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 CLUAP1Q96AJ1 413 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 ARID4BQ4LE39 1312 aaPredicted RBP8.53□□□□□ -1.04
RPF2-204ENST00000607388 PANK3Q9H999 370 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 MYOM3Q5VTT5 1437 aa8.53□□□□□ -1.04
RPF2-204ENST00000607388 TULP1O00294 542 aaPredicted RBP8.53□□□□□ -1.04
RPF2-204ENST00000607388 NPM1P06748 294 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPF2-204ENST00000607388 RRP1P56182 461 aaKnown RBP8.52□□□□□ -1.05
RPF2-204ENST00000607388 BRPF3Q9ULD4 1205 aa8.52□□□□□ -1.05
RPF2-204ENST00000607388 CHD1O14646 1710 aa8.52□□□□□ -1.05
RPF2-204ENST00000607388 CDK13Q14004 1512 aaKnown RBP8.51□□□□□ -1.05
RPF2-204ENST00000607388 PNISRQ8TF01 805 aaKnown RBP8.51□□□□□ -1.05
RPF2-204ENST00000607388 PTPRGP23470 1445 aa8.51□□□□□ -1.05
RPF2-204ENST00000607388 ROCK2O75116 1388 aaKnown RBP8.51□□□□□ -1.05
RPF2-204ENST00000607388 PLEKHG5O94827 1062 aa8.51□□□□□ -1.05
RPF2-204ENST00000607388 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
RPF2-204ENST00000607388 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
RPF2-204ENST00000607388 KNSTRNQ9Y448 316 aa8.5□□□□□ -1.05
RPF2-204ENST00000607388 ERCC6L2Q5T890 1561 aa8.5□□□□□ -1.05
RPF2-204ENST00000607388 CASKIN1Q8WXD9 1431 aa8.49□□□□□ -1.05
RPF2-204ENST00000607388 KIAA0586Q9BVV6 1533 aa8.49□□□□□ -1.05
RPF2-204ENST00000607388 HFM1A2PYH4 1435 aa8.49□□□□□ -1.05
RPF2-204ENST00000607388 CARMIL2Q6F5E8 1435 aa8.49□□□□□ -1.05
RPF2-204ENST00000607388 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
RPF2-204ENST00000607388 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms