RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
HCG18-241ENST00000602290 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
HCG18-241ENST00000602290 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
HCG18-241ENST00000602290 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
HCG18-241ENST00000602290 UBAP1LF5GYI3 381 aa20.7■□□□□ 0.9
HCG18-241ENST00000602290 ATP10AO60312 1499 aa20.69■□□□□ 0.9
HCG18-241ENST00000602290 RAPGEF6Q8TEU7 1601 aa20.67■□□□□ 0.9
HCG18-241ENST00000602290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.67■□□□□ 0.9
HCG18-241ENST00000602290 C3P01024 1663 aa20.66■□□□□ 0.9
HCG18-241ENST00000602290 NUP153P49790 1475 aaKnown RBP20.65■□□□□ 0.9
HCG18-241ENST00000602290 ZNF335Q9H4Z2 1342 aaPredicted RBP20.63■□□□□ 0.89
HCG18-241ENST00000602290 HSPA1LP34931 641 aa20.61■□□□□ 0.89
HCG18-241ENST00000602290 CAMSAP1Q5T5Y3 1602 aa20.59■□□□□ 0.89
HCG18-241ENST00000602290 TRAPPC8Q9Y2L5 1435 aa20.59■□□□□ 0.89
HCG18-241ENST00000602290 SAMD9Q5K651 1589 aa20.59■□□□□ 0.89
HCG18-241ENST00000602290 SCAPERQ9BY12 1400 aa20.57■□□□□ 0.88
HCG18-241ENST00000602290 REREQ9P2R6 1566 aa20.57■□□□□ 0.88
HCG18-241ENST00000602290 KDM5CP41229 1560 aa20.52■□□□□ 0.88
HCG18-241ENST00000602290 PRXQ9BXM0 1461 aa20.52■□□□□ 0.88
HCG18-241ENST00000602290 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
HCG18-241ENST00000602290 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
HCG18-241ENST00000602290 AGLP35573 1532 aa20.5■□□□□ 0.87
HCG18-241ENST00000602290 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
HCG18-241ENST00000602290 TCOF1Q13428 1488 aaKnown RBP20.5■□□□□ 0.87
HCG18-241ENST00000602290 PLCH2O75038 1416 aa20.48■□□□□ 0.87
HCG18-241ENST00000602290 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
HCG18-241ENST00000602290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
HCG18-241ENST00000602290 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
HCG18-241ENST00000602290 ALKQ9UM73 1620 aa20.46■□□□□ 0.87
HCG18-241ENST00000602290 NPATQ14207 1427 aa20.46■□□□□ 0.87
HCG18-241ENST00000602290 ZNF142P52746 1687 aaPredicted RBP20.46■□□□□ 0.87
HCG18-241ENST00000602290 ZNF518AQ6AHZ1 1483 aa20.45■□□□□ 0.86
HCG18-241ENST00000602290 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
HCG18-241ENST00000602290 ABCA6Q8N139 1617 aa20.44■□□□□ 0.86
HCG18-241ENST00000602290 NCKAP5LQ9HCH0 1330 aa20.44■□□□□ 0.86
HCG18-241ENST00000602290 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
HCG18-241ENST00000602290 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
HCG18-241ENST00000602290 MYO3AQ8NEV4 1616 aa20.39■□□□□ 0.86
HCG18-241ENST00000602290 CPS1P31327 1500 aa20.39■□□□□ 0.85
HCG18-241ENST00000602290 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
HCG18-241ENST00000602290 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
HCG18-241ENST00000602290 MROH2AA6NES4 1674 aa20.38■□□□□ 0.85
HCG18-241ENST00000602290 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
HCG18-241ENST00000602290 PKD2Q13563 968 aa20.38■□□□□ 0.85
HCG18-241ENST00000602290 TOM1O60784 492 aa20.36■□□□□ 0.85
HCG18-241ENST00000602290 CEP170BQ9Y4F5 1589 aaPredicted RBP20.36■□□□□ 0.85
HCG18-241ENST00000602290 MLH3Q9UHC1 1453 aa20.35■□□□□ 0.85
HCG18-241ENST00000602290 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
HCG18-241ENST00000602290 MYO5CQ9NQX4 1742 aa20.32■□□□□ 0.84
HCG18-241ENST00000602290 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
HCG18-241ENST00000602290 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
HCG18-241ENST00000602290 PTPRKQ15262 1439 aa20.28■□□□□ 0.84
HCG18-241ENST00000602290 SHANK2Q9UPX8 1470 aa20.28■□□□□ 0.84
HCG18-241ENST00000602290 NEURL4Q96JN8 1562 aa20.28■□□□□ 0.84
HCG18-241ENST00000602290 EFCAB2Q5VUJ9 269 aa20.27■□□□□ 0.84
HCG18-241ENST00000602290 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
HCG18-241ENST00000602290 SUPT6HQ7KZ85 1726 aaKnown RBP20.26■□□□□ 0.83
HCG18-241ENST00000602290 ZMYM3Q14202 1370 aa20.24■□□□□ 0.83
HCG18-241ENST00000602290 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
HCG18-241ENST00000602290 SRCAPQ6ZRS2 3230 aa20.21■□□□□ 0.83
HCG18-241ENST00000602290 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
HCG18-241ENST00000602290 KIF14Q15058 1648 aa20.2■□□□□ 0.82
HCG18-241ENST00000602290 POLR1AO95602 1720 aaPredicted RBP20.2■□□□□ 0.82
HCG18-241ENST00000602290 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
HCG18-241ENST00000602290 ABCC1P33527 1531 aa20.19■□□□□ 0.82
HCG18-241ENST00000602290 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
HCG18-241ENST00000602290 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
HCG18-241ENST00000602290 POTEAQ6S8J7 498 aa20.17■□□□□ 0.82
HCG18-241ENST00000602290 A2ML1A8K2U0 1454 aa20.17■□□□□ 0.82
HCG18-241ENST00000602290 RNF17Q9BXT8 1623 aaKnown RBP20.16■□□□□ 0.82
HCG18-241ENST00000602290 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
HCG18-241ENST00000602290 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
HCG18-241ENST00000602290 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
HCG18-241ENST00000602290 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
HCG18-241ENST00000602290 CDC42BPBQ9Y5S2 1711 aa20.1■□□□□ 0.81
HCG18-241ENST00000602290 SYNMO15061 1565 aa20.09■□□□□ 0.81
HCG18-241ENST00000602290 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.81
HCG18-241ENST00000602290 PREX2Q70Z35 1606 aa20.06■□□□□ 0.8
HCG18-241ENST00000602290 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
HCG18-241ENST00000602290 MED14O60244 1454 aa20.05■□□□□ 0.8
HCG18-241ENST00000602290 TROQ12816 1431 aaPredicted RBP20.05■□□□□ 0.8
HCG18-241ENST00000602290 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
HCG18-241ENST00000602290 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
HCG18-241ENST00000602290 DEPDC5O75140 1603 aa20.02■□□□□ 0.8
HCG18-241ENST00000602290 NPHP4O75161 1426 aaPredicted RBP19.99■□□□□ 0.79
HCG18-241ENST00000602290 UPF1Q92900 1129 aaKnown RBP eCLIP19.97■□□□□ 0.79
HCG18-241ENST00000602290 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
HCG18-241ENST00000602290 INO80Q9ULG1 1556 aaPredicted RBP19.95■□□□□ 0.78
HCG18-241ENST00000602290 CLIP1P30622 1438 aa19.94■□□□□ 0.78
HCG18-241ENST00000602290 A2MP01023 1474 aa19.93■□□□□ 0.78
HCG18-241ENST00000602290 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
HCG18-241ENST00000602290 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
HCG18-241ENST00000602290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
HCG18-241ENST00000602290 TNRQ92752 1358 aa19.91■□□□□ 0.78
HCG18-241ENST00000602290 FAM135BQ49AJ0 1406 aa19.91■□□□□ 0.78
HCG18-241ENST00000602290 ANKLE2Q86XL3 938 aa19.9■□□□□ 0.78
HCG18-241ENST00000602290 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
HCG18-241ENST00000602290 SYCP2Q9BX26 1530 aa19.9■□□□□ 0.78
HCG18-241ENST00000602290 PZPP20742 1482 aa19.88■□□□□ 0.77
HCG18-241ENST00000602290 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms