RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 NEO1Q92859 1461 aa19.22■□□□□ 0.67
ZNF548-210ENST00000600442 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.67
ZNF548-210ENST00000600442 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
ZNF548-210ENST00000600442 FBXO41Q8TF61 875 aa19.2■□□□□ 0.66
ZNF548-210ENST00000600442 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
ZNF548-210ENST00000600442 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
ZNF548-210ENST00000600442 ARID4BQ4LE39 1312 aaPredicted RBP19.18■□□□□ 0.66
ZNF548-210ENST00000600442 FRMPD1Q5SYB0 1578 aa19.18■□□□□ 0.66
ZNF548-210ENST00000600442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.66
ZNF548-210ENST00000600442 MADDQ8WXG6 1647 aa19.15■□□□□ 0.66
ZNF548-210ENST00000600442 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
ZNF548-210ENST00000600442 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
ZNF548-210ENST00000600442 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
ZNF548-210ENST00000600442 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
ZNF548-210ENST00000600442 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
ZNF548-210ENST00000600442 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
ZNF548-210ENST00000600442 RIMS1Q86UR5 1692 aaKnown RBP19.1■□□□□ 0.65
ZNF548-210ENST00000600442 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
ZNF548-210ENST00000600442 LMTK3Q96Q04 1460 aa19.09■□□□□ 0.65
ZNF548-210ENST00000600442 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
ZNF548-210ENST00000600442 KIF14Q15058 1648 aa19.07■□□□□ 0.64
ZNF548-210ENST00000600442 ARHGEF40Q8TER5 1519 aa19.07■□□□□ 0.64
ZNF548-210ENST00000600442 CFDP1Q9UEE9 299 aaPredicted RBP19.06■□□□□ 0.64
ZNF548-210ENST00000600442 FANCAO15360 1455 aa19.05■□□□□ 0.64
ZNF548-210ENST00000600442 ITGAEP38570 1179 aa19.05■□□□□ 0.64
ZNF548-210ENST00000600442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.05■□□□□ 0.64
ZNF548-210ENST00000600442 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
ZNF548-210ENST00000600442 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
ZNF548-210ENST00000600442 SIGLEC1Q9BZZ2 1709 aa19.02■□□□□ 0.63
ZNF548-210ENST00000600442 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
ZNF548-210ENST00000600442 HSPA2P54652 639 aa19.01■□□□□ 0.63
ZNF548-210ENST00000600442 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
ZNF548-210ENST00000600442 ZMYM4Q5VZL5 1548 aa18.99■□□□□ 0.63
ZNF548-210ENST00000600442 ITSN2Q9NZM3 1697 aa18.98■□□□□ 0.63
ZNF548-210ENST00000600442 TCOF1Q13428 1488 aaKnown RBP18.98■□□□□ 0.63
ZNF548-210ENST00000600442 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
ZNF548-210ENST00000600442 ZFYVE16Q7Z3T8 1539 aa18.98■□□□□ 0.63
ZNF548-210ENST00000600442 YEATS2Q9ULM3 1422 aa18.98■□□□□ 0.63
ZNF548-210ENST00000600442 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
ZNF548-210ENST00000600442 GPATCH8Q9UKJ3 1502 aaKnown RBP18.97■□□□□ 0.63
ZNF548-210ENST00000600442 MLECQ14165 292 aa18.96■□□□□ 0.63
ZNF548-210ENST00000600442 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
ZNF548-210ENST00000600442 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
ZNF548-210ENST00000600442 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
ZNF548-210ENST00000600442 FER1L4A9Z1Z3 1794 aa18.95■□□□□ 0.62
ZNF548-210ENST00000600442 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
ZNF548-210ENST00000600442 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
ZNF548-210ENST00000600442 RSPH4AQ5TD94 716 aa18.93■□□□□ 0.62
ZNF548-210ENST00000600442 PLCH2O75038 1416 aa18.92■□□□□ 0.62
ZNF548-210ENST00000600442 HRCP23327 699 aa18.91■□□□□ 0.62
ZNF548-210ENST00000600442 EFCAB2Q5VUJ9 269 aa18.9■□□□□ 0.62
ZNF548-210ENST00000600442 SETD5Q9C0A6 1442 aa18.89■□□□□ 0.61
ZNF548-210ENST00000600442 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
ZNF548-210ENST00000600442 CERKQ8TCT0 537 aa18.88■□□□□ 0.61
ZNF548-210ENST00000600442 ATP10AO60312 1499 aa18.88■□□□□ 0.61
ZNF548-210ENST00000600442 PLEKHH2Q8IVE3 1493 aa18.88■□□□□ 0.61
ZNF548-210ENST00000600442 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
ZNF548-210ENST00000600442 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
ZNF548-210ENST00000600442 CAMSAP2Q08AD1 1489 aa18.86■□□□□ 0.61
ZNF548-210ENST00000600442 ARHGAP5Q13017 1502 aa18.85■□□□□ 0.61
ZNF548-210ENST00000600442 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
ZNF548-210ENST00000600442 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
ZNF548-210ENST00000600442 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
ZNF548-210ENST00000600442 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
ZNF548-210ENST00000600442 SETD1BQ9UPS6 1966 aaKnown RBP18.83■□□□□ 0.61
ZNF548-210ENST00000600442 CEBPAP49715 358 aaPredicted RBP18.83■□□□□ 0.6
ZNF548-210ENST00000600442 DAPK1P53355 1430 aa18.83■□□□□ 0.6
ZNF548-210ENST00000600442 ROCK1Q13464 1354 aa18.82■□□□□ 0.6
ZNF548-210ENST00000600442 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
ZNF548-210ENST00000600442 PREX2Q70Z35 1606 aa18.81■□□□□ 0.6
ZNF548-210ENST00000600442 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
ZNF548-210ENST00000600442 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
ZNF548-210ENST00000600442 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
ZNF548-210ENST00000600442 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
ZNF548-210ENST00000600442 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
ZNF548-210ENST00000600442 ABCC5O15440 1437 aa18.79■□□□□ 0.6
ZNF548-210ENST00000600442 ANKRD30AQ9BXX3 1397 aa18.79■□□□□ 0.6
ZNF548-210ENST00000600442 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
ZNF548-210ENST00000600442 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
ZNF548-210ENST00000600442 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
ZNF548-210ENST00000600442 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
ZNF548-210ENST00000600442 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
ZNF548-210ENST00000600442 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.59
ZNF548-210ENST00000600442 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
ZNF548-210ENST00000600442 KDM5CP41229 1560 aa18.75■□□□□ 0.59
ZNF548-210ENST00000600442 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
ZNF548-210ENST00000600442 CDC42BPBQ9Y5S2 1711 aa18.74■□□□□ 0.59
ZNF548-210ENST00000600442 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
ZNF548-210ENST00000600442 RRP7BPQ9NSQ0 103 aa18.74■□□□□ 0.59
ZNF548-210ENST00000600442 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
ZNF548-210ENST00000600442 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
ZNF548-210ENST00000600442 NAIPQ13075 1403 aa18.73■□□□□ 0.59
ZNF548-210ENST00000600442 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
ZNF548-210ENST00000600442 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
ZNF548-210ENST00000600442 C3P01024 1663 aa18.7■□□□□ 0.58
ZNF548-210ENST00000600442 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
ZNF548-210ENST00000600442 ABCA6Q8N139 1617 aa18.69■□□□□ 0.58
ZNF548-210ENST00000600442 ADGRL2O95490 1459 aa18.69■□□□□ 0.58
ZNF548-210ENST00000600442 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
ZNF548-210ENST00000600442 REREQ9P2R6 1566 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms