RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 EFCAB2Q5VUJ9 269 aa29.38■■■□□ 2.29
COPE-209ENST00000599964 PPARGC1BQ86YN6 1023 aaKnown RBP29.38■■■□□ 2.29
COPE-209ENST00000599964 FANCAO15360 1455 aa29.37■■■□□ 2.29
COPE-209ENST00000599964 CFDP1Q9UEE9 299 aaPredicted RBP29.36■■■□□ 2.29
COPE-209ENST00000599964 CDC42BPBQ9Y5S2 1711 aa29.36■■■□□ 2.29
COPE-209ENST00000599964 NEO1Q92859 1461 aa29.36■■■□□ 2.29
COPE-209ENST00000599964 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
COPE-209ENST00000599964 MYOM3Q5VTT5 1437 aa29.34■■■□□ 2.29
COPE-209ENST00000599964 MIA2Q96PC5 1412 aa29.28■■■□□ 2.28
COPE-209ENST00000599964 ZNF777Q9ULD5 760 aaPredicted RBP29.27■■■□□ 2.28
COPE-209ENST00000599964 AKNAQ7Z591 1439 aa29.27■■■□□ 2.28
COPE-209ENST00000599964 PLEKHH2Q8IVE3 1493 aa29.23■■■□□ 2.27
COPE-209ENST00000599964 ADGRL1O94910 1474 aa29.23■■■□□ 2.27
COPE-209ENST00000599964 FGD6Q6ZV73 1430 aa29.21■■■□□ 2.27
COPE-209ENST00000599964 SAMD9LQ8IVG5 1584 aa29.2■■■□□ 2.26
COPE-209ENST00000599964 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
COPE-209ENST00000599964 ABCC1P33527 1531 aa29.17■■■□□ 2.26
COPE-209ENST00000599964 SCAPERQ9BY12 1400 aa29.17■■■□□ 2.26
COPE-209ENST00000599964 KDM6BO15054 1643 aa29.16■■■□□ 2.26
COPE-209ENST00000599964 KIAA1107Q9UPP5 1409 aa29.16■■■□□ 2.26
COPE-209ENST00000599964 PTPN23Q9H3S7 1636 aa29.16■■■□□ 2.26
COPE-209ENST00000599964 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
COPE-209ENST00000599964 ZNF644Q9H582 1327 aaPredicted RBP29.13■■■□□ 2.25
COPE-209ENST00000599964 TCOF1Q13428 1488 aaKnown RBP29.11■■■□□ 2.25
COPE-209ENST00000599964 SYCP2Q9BX26 1530 aa29.11■■■□□ 2.25
COPE-209ENST00000599964 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
COPE-209ENST00000599964 HNRNPMP52272 730 aaKnown RBP eCLIP29.08■■■□□ 2.25
COPE-209ENST00000599964 POGZQ7Z3K3 1410 aa29.08■■■□□ 2.25
COPE-209ENST00000599964 ZNF518AQ6AHZ1 1483 aa29.08■■■□□ 2.25
COPE-209ENST00000599964 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
COPE-209ENST00000599964 ARHGEF12Q9NZN5 1544 aa29.06■■■□□ 2.24
COPE-209ENST00000599964 COL17A1Q9UMD9 1497 aaPredicted RBP29.06■■■□□ 2.24
COPE-209ENST00000599964 RICTORQ6R327 1708 aa29.05■■■□□ 2.24
COPE-209ENST00000599964 RRBP1Q9P2E9 1410 aaKnown RBP29.04■■■□□ 2.24
COPE-209ENST00000599964 RAPGEF3O95398 923 aa29.04■■■□□ 2.24
COPE-209ENST00000599964 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
COPE-209ENST00000599964 MBD5Q9P267 1494 aa29.03■■■□□ 2.24
COPE-209ENST00000599964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.02■■■□□ 2.247e-11■■□□□ 12.1
COPE-209ENST00000599964 CCDC141Q6ZP82 1450 aa29.02■■■□□ 2.24
COPE-209ENST00000599964 TRAPPC8Q9Y2L5 1435 aa29.02■■■□□ 2.24
COPE-209ENST00000599964 FRMPD1Q5SYB0 1578 aa29■■■□□ 2.23
COPE-209ENST00000599964 AFAP1Q8N556 730 aa28.99■■■□□ 2.23
COPE-209ENST00000599964 KDM5CP41229 1560 aa28.98■■■□□ 2.23
COPE-209ENST00000599964 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
COPE-209ENST00000599964 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
COPE-209ENST00000599964 ZMYM4Q5VZL5 1548 aa28.97■■■□□ 2.23
COPE-209ENST00000599964 MYT1LQ9UL68 1186 aa28.96■■■□□ 2.23
COPE-209ENST00000599964 DNMT1P26358 1616 aaKnown RBP28.95■■■□□ 2.23
COPE-209ENST00000599964 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
COPE-209ENST00000599964 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
COPE-209ENST00000599964 DAPK1P53355 1430 aa28.93■■■□□ 2.22
COPE-209ENST00000599964 HECW2Q9P2P5 1572 aa28.92■■■□□ 2.22
COPE-209ENST00000599964 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
COPE-209ENST00000599964 ABCC5O15440 1437 aa28.9■■■□□ 2.22
COPE-209ENST00000599964 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
COPE-209ENST00000599964 SHANK2Q9UPX8 1470 aa28.89■■■□□ 2.22
COPE-209ENST00000599964 RTEL1-TNFRSF6BF6WH68 1400 aa28.88■■■□□ 2.21
COPE-209ENST00000599964 ATP7AQ04656 1500 aa28.87■■■□□ 2.21
COPE-209ENST00000599964 ZFYVE16Q7Z3T8 1539 aa28.87■■■□□ 2.21
COPE-209ENST00000599964 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
COPE-209ENST00000599964 C9orf84Q5VXU9 1444 aa28.86■■■□□ 2.21
COPE-209ENST00000599964 INO80Q9ULG1 1556 aaPredicted RBP28.86■■■□□ 2.21
COPE-209ENST00000599964 ITGAEP38570 1179 aa28.83■■■□□ 2.21
COPE-209ENST00000599964 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
COPE-209ENST00000599964 ARHGEF40Q8TER5 1519 aa28.81■■■□□ 2.2
COPE-209ENST00000599964 YEATS2Q9ULM3 1422 aa28.79■■■□□ 2.2
COPE-209ENST00000599964 ANKRD30AQ9BXX3 1397 aa28.77■■■□□ 2.2
COPE-209ENST00000599964 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
COPE-209ENST00000599964 CHIC2Q9UKJ5 165 aa28.77■■■□□ 2.2
COPE-209ENST00000599964 ABCA6Q8N139 1617 aa28.76■■■□□ 2.19
COPE-209ENST00000599964 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
COPE-209ENST00000599964 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
COPE-209ENST00000599964 ATP10AO60312 1499 aa28.75■■■□□ 2.19
COPE-209ENST00000599964 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
COPE-209ENST00000599964 PTPRKQ15262 1439 aa28.73■■■□□ 2.19
COPE-209ENST00000599964 ROCK1Q13464 1354 aa28.72■■■□□ 2.19
COPE-209ENST00000599964 NCOA1Q15788 1441 aa28.7■■■□□ 2.19
COPE-209ENST00000599964 KIF15Q9NS87 1388 aa28.69■■■□□ 2.18
COPE-209ENST00000599964 A2MP01023 1474 aa28.69■■■□□ 2.18
COPE-209ENST00000599964 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
COPE-209ENST00000599964 TRIM26Q12899 539 aaPredicted RBP28.68■■■□□ 2.18
COPE-209ENST00000599964 RRP7BPQ9NSQ0 103 aa28.68■■■□□ 2.18
COPE-209ENST00000599964 DUOX2Q9NRD8 1548 aa28.66■■■□□ 2.18
COPE-209ENST00000599964 DHX29Q7Z478 1369 aaKnown RBP28.64■■■□□ 2.18
COPE-209ENST00000599964 ARID4BQ4LE39 1312 aaPredicted RBP28.61■■■□□ 2.17
COPE-209ENST00000599964 AGLP35573 1532 aa28.59■■■□□ 2.17
COPE-209ENST00000599964 ERBINQ96RT1 1412 aa28.59■■■□□ 2.17
COPE-209ENST00000599964 EIF2AK4Q9P2K8 1649 aaKnown RBP28.55■■■□□ 2.16
COPE-209ENST00000599964 HFM1A2PYH4 1435 aa28.55■■■□□ 2.16
COPE-209ENST00000599964 ANKRD50Q9ULJ7 1429 aa28.55■■■□□ 2.16
COPE-209ENST00000599964 GCC2Q8IWJ2 1684 aa28.54■■■□□ 2.16
COPE-209ENST00000599964 NAIPQ13075 1403 aa28.52■■■□□ 2.16
COPE-209ENST00000599964 KIF3BO15066 747 aa28.51■■■□□ 2.15
COPE-209ENST00000599964 BCORL1Q5H9F3 1711 aa28.51■■■□□ 2.15
COPE-209ENST00000599964 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
COPE-209ENST00000599964 MLECQ14165 292 aa28.44■■■□□ 2.14
COPE-209ENST00000599964 GGT6Q6P531 493 aa28.44■■■□□ 2.14
COPE-209ENST00000599964 RNF17Q9BXT8 1623 aaKnown RBP28.43■■■□□ 2.14
COPE-209ENST00000599964 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
COPE-209ENST00000599964 ACIN1Q9UKV3 1341 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms