RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.53■■■□□ 2.16
KHSRP-211ENST00000599642 FGD6Q6ZV73 1430 aa28.52■■■□□ 2.16
KHSRP-211ENST00000599642 ARHGAP5Q13017 1502 aa28.52■■■□□ 2.16
KHSRP-211ENST00000599642 NEO1Q92859 1461 aa28.52■■■□□ 2.16
KHSRP-211ENST00000599642 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
KHSRP-211ENST00000599642 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
KHSRP-211ENST00000599642 EFCAB2Q5VUJ9 269 aa28.5■■■□□ 2.15
KHSRP-211ENST00000599642 CFDP1Q9UEE9 299 aaPredicted RBP28.5■■■□□ 2.15
KHSRP-211ENST00000599642 PPRC1Q5VV67 1664 aaKnown RBP28.5■■■□□ 2.15
KHSRP-211ENST00000599642 TCOF1Q13428 1488 aaKnown RBP28.49■■■□□ 2.15
KHSRP-211ENST00000599642 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
KHSRP-211ENST00000599642 PTPN23Q9H3S7 1636 aa28.48■■■□□ 2.15
KHSRP-211ENST00000599642 FANCAO15360 1455 aa28.47■■■□□ 2.15
KHSRP-211ENST00000599642 KIAA1107Q9UPP5 1409 aa28.45■■■□□ 2.15
KHSRP-211ENST00000599642 TSPOAP1O95153 1857 aa28.45■■■□□ 2.15
KHSRP-211ENST00000599642 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
KHSRP-211ENST00000599642 RSPH4AQ5TD94 716 aa28.41■■■□□ 2.14
KHSRP-211ENST00000599642 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
KHSRP-211ENST00000599642 CAMSAP2Q08AD1 1489 aa28.4■■■□□ 2.14
KHSRP-211ENST00000599642 ABCC1P33527 1531 aa28.38■■■□□ 2.13
KHSRP-211ENST00000599642 AKNAQ7Z591 1439 aa28.38■■■□□ 2.13
KHSRP-211ENST00000599642 ARHGEF5Q12774 1597 aa28.37■■■□□ 2.13
KHSRP-211ENST00000599642 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
KHSRP-211ENST00000599642 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
KHSRP-211ENST00000599642 MBD5Q9P267 1494 aa28.29■■■□□ 2.12
KHSRP-211ENST00000599642 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
KHSRP-211ENST00000599642 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
KHSRP-211ENST00000599642 CROCC2H7BZ55 1655 aa28.26■■■□□ 2.12
KHSRP-211ENST00000599642 ZNF518AQ6AHZ1 1483 aa28.26■■■□□ 2.11
KHSRP-211ENST00000599642 CCDC141Q6ZP82 1450 aa28.26■■■□□ 2.11
KHSRP-211ENST00000599642 SCAPERQ9BY12 1400 aa28.26■■■□□ 2.11
KHSRP-211ENST00000599642 TRIM26Q12899 539 aaPredicted RBP28.25■■■□□ 2.11
KHSRP-211ENST00000599642 SHANK2Q9UPX8 1470 aa28.25■■■□□ 2.11
KHSRP-211ENST00000599642 DENND4BO75064 1496 aaPredicted RBP28.24■■■□□ 2.11
KHSRP-211ENST00000599642 RICTORQ6R327 1708 aa28.23■■■□□ 2.11
KHSRP-211ENST00000599642 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
KHSRP-211ENST00000599642 FAM50AQ14320 339 aaKnown RBP28.23■■■□□ 2.11
KHSRP-211ENST00000599642 MAST1Q9Y2H9 1570 aa28.23■■■□□ 2.11
KHSRP-211ENST00000599642 ARHGEF12Q9NZN5 1544 aa28.23■■■□□ 2.11
KHSRP-211ENST00000599642 KDM5CP41229 1560 aa28.21■■■□□ 2.11
KHSRP-211ENST00000599642 DAPK1P53355 1430 aa28.21■■■□□ 2.11
KHSRP-211ENST00000599642 POGZQ7Z3K3 1410 aa28.21■■■□□ 2.11
KHSRP-211ENST00000599642 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
KHSRP-211ENST00000599642 ABCC5O15440 1437 aa28.18■■■□□ 2.1
KHSRP-211ENST00000599642 ZMYM4Q5VZL5 1548 aa28.17■■■□□ 2.1
KHSRP-211ENST00000599642 TSPY4P0CV99 314 aa28.16■■■□□ 2.1
KHSRP-211ENST00000599642 TSPY10P0CW01 314 aa28.16■■■□□ 2.1
KHSRP-211ENST00000599642 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
KHSRP-211ENST00000599642 ADGBQ8N7X0 1667 aa28.16■■■□□ 2.1
KHSRP-211ENST00000599642 MAGI2Q86UL8 1455 aa28.15■■■□□ 2.1
KHSRP-211ENST00000599642 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.1
KHSRP-211ENST00000599642 MLH3Q9UHC1 1453 aa28.14■■■□□ 2.09
KHSRP-211ENST00000599642 KDM6BO15054 1643 aa28.14■■■□□ 2.09
KHSRP-211ENST00000599642 FRMPD1Q5SYB0 1578 aa28.12■■■□□ 2.09
KHSRP-211ENST00000599642 ADGRL2O95490 1459 aa28.12■■■□□ 2.09
KHSRP-211ENST00000599642 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
KHSRP-211ENST00000599642 HECW2Q9P2P5 1572 aa28.11■■■□□ 2.09
KHSRP-211ENST00000599642 INO80Q9ULG1 1556 aaPredicted RBP28.11■■■□□ 2.09
KHSRP-211ENST00000599642 PLXNC1O60486 1568 aa28.1■■■□□ 2.09
KHSRP-211ENST00000599642 C9orf84Q5VXU9 1444 aa28.09■■■□□ 2.09
KHSRP-211ENST00000599642 ATP7AQ04656 1500 aa28.07■■■□□ 2.08
KHSRP-211ENST00000599642 ZFYVE16Q7Z3T8 1539 aa28.07■■■□□ 2.08
KHSRP-211ENST00000599642 KIDINS220Q9ULH0 1771 aa28.06■■■□□ 2.08
KHSRP-211ENST00000599642 SPAG9O60271 1321 aaKnown RBP28.05■■■□□ 2.08
KHSRP-211ENST00000599642 COL17A1Q9UMD9 1497 aaPredicted RBP28.05■■■□□ 2.08
KHSRP-211ENST00000599642 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
KHSRP-211ENST00000599642 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
KHSRP-211ENST00000599642 PTPRKQ15262 1439 aa28.02■■■□□ 2.08
KHSRP-211ENST00000599642 NCOA1Q15788 1441 aa28.01■■■□□ 2.07
KHSRP-211ENST00000599642 RAPGEF3O95398 923 aa28■■■□□ 2.07
KHSRP-211ENST00000599642 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
KHSRP-211ENST00000599642 GCC2Q8IWJ2 1684 aa27.99■■■□□ 2.07
KHSRP-211ENST00000599642 REREQ9P2R6 1566 aa27.97■■■□□ 2.07
KHSRP-211ENST00000599642 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
KHSRP-211ENST00000599642 DUOX2Q9NRD8 1548 aa27.95■■■□□ 2.06
KHSRP-211ENST00000599642 ARHGEF40Q8TER5 1519 aa27.94■■■□□ 2.06
KHSRP-211ENST00000599642 ITGAEP38570 1179 aa27.93■■■□□ 2.06
KHSRP-211ENST00000599642 DIP2CQ9Y2E4 1556 aa27.92■■■□□ 2.06
KHSRP-211ENST00000599642 ABCA6Q8N139 1617 aa27.92■■■□□ 2.06
KHSRP-211ENST00000599642 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
KHSRP-211ENST00000599642 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.06
KHSRP-211ENST00000599642 KIF15Q9NS87 1388 aa27.89■■■□□ 2.06
KHSRP-211ENST00000599642 ERBINQ96RT1 1412 aa27.89■■■□□ 2.06
KHSRP-211ENST00000599642 CHIC2Q9UKJ5 165 aa27.88■■■□□ 2.05
KHSRP-211ENST00000599642 ATP10AO60312 1499 aa27.88■■■□□ 2.05
KHSRP-211ENST00000599642 NAIPQ13075 1403 aa27.87■■■□□ 2.05
KHSRP-211ENST00000599642 HRCP23327 699 aa27.87■■■□□ 2.05
KHSRP-211ENST00000599642 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
KHSRP-211ENST00000599642 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
KHSRP-211ENST00000599642 A2MP01023 1474 aa27.85■■■□□ 2.05
KHSRP-211ENST00000599642 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
KHSRP-211ENST00000599642 ANKRD50Q9ULJ7 1429 aa27.83■■■□□ 2.05
KHSRP-211ENST00000599642 YEATS2Q9ULM3 1422 aa27.83■■■□□ 2.05
KHSRP-211ENST00000599642 AGLP35573 1532 aa27.82■■■□□ 2.04
KHSRP-211ENST00000599642 RRP7BPQ9NSQ0 103 aa27.81■■■□□ 2.04
KHSRP-211ENST00000599642 PCGF6Q9BYE7 350 aa27.79■■■□□ 2.04
KHSRP-211ENST00000599642 DEPDC5O75140 1603 aa27.74■■■□□ 2.03
KHSRP-211ENST00000599642 RNF17Q9BXT8 1623 aaKnown RBP27.74■■■□□ 2.03
KHSRP-211ENST00000599642 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
KHSRP-211ENST00000599642 UNC13BO14795 1591 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms