RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
KHSRP-211ENST00000599642 CCDC180Q9P1Z9 1646 aa38.88■■■■□ 3.81
KHSRP-211ENST00000599642 ABCC9O60706 1549 aa37■■■■□ 3.51
KHSRP-211ENST00000599642 ZCCHC6Q5VYS8 1495 aaKnown RBP36.72■■■■□ 3.47
KHSRP-211ENST00000599642 DCAF1Q9Y4B6 1507 aa36.52■■■■□ 3.44
KHSRP-211ENST00000599642 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
KHSRP-211ENST00000599642 NACADO15069 1562 aa36.34■■■■□ 3.41
KHSRP-211ENST00000599642 RB1CC1Q8TDY2 1594 aa36.16■■■■□ 3.38
KHSRP-211ENST00000599642 DCAF8L2P0C7V8 631 aa36.08■■■■□ 3.37
KHSRP-211ENST00000599642 UNC13AQ9UPW8 1703 aa35.33■■■■□ 3.25
KHSRP-211ENST00000599642 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
KHSRP-211ENST00000599642 BICRAQ9NZM4 1560 aa34.93■■■■□ 3.18
KHSRP-211ENST00000599642 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
KHSRP-211ENST00000599642 PABPN1Q86U42 306 aaKnown RBP eCLIP34.59■■■■□ 3.13
KHSRP-211ENST00000599642 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
KHSRP-211ENST00000599642 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
KHSRP-211ENST00000599642 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
KHSRP-211ENST00000599642 SMARCA4P51532 1647 aa33.91■■■■□ 3.02
KHSRP-211ENST00000599642 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
KHSRP-211ENST00000599642 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
KHSRP-211ENST00000599642 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
KHSRP-211ENST00000599642 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
KHSRP-211ENST00000599642 SMARCA2P51531 1590 aa33.62■■■□□ 2.97
KHSRP-211ENST00000599642 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
KHSRP-211ENST00000599642 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
KHSRP-211ENST00000599642 WIZO95785 1651 aa33.42■■■□□ 2.94
KHSRP-211ENST00000599642 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
KHSRP-211ENST00000599642 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
KHSRP-211ENST00000599642 TOP2AP11388 1531 aaKnown RBP33.21■■■□□ 2.91
KHSRP-211ENST00000599642 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
KHSRP-211ENST00000599642 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
KHSRP-211ENST00000599642 CCDC88BA6NC98 1476 aa32.72■■■□□ 2.83
KHSRP-211ENST00000599642 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
KHSRP-211ENST00000599642 CADPSQ9ULU8 1353 aa32.46■■■□□ 2.79
KHSRP-211ENST00000599642 CFTRP13569 1480 aa32.45■■■□□ 2.79
KHSRP-211ENST00000599642 PRDM2Q13029 1718 aa32.44■■■□□ 2.78
KHSRP-211ENST00000599642 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
KHSRP-211ENST00000599642 NESP48681 1621 aa32.21■■■□□ 2.75
KHSRP-211ENST00000599642 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
KHSRP-211ENST00000599642 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
KHSRP-211ENST00000599642 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
KHSRP-211ENST00000599642 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
KHSRP-211ENST00000599642 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
KHSRP-211ENST00000599642 MRC2Q9UBG0 1479 aa31.79■■■□□ 2.68
KHSRP-211ENST00000599642 THOC2Q8NI27 1593 aaKnown RBP31.75■■■□□ 2.67
KHSRP-211ENST00000599642 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
KHSRP-211ENST00000599642 WRNQ14191 1432 aaPredicted RBP eCLIP31.72■■■□□ 2.67
KHSRP-211ENST00000599642 WDR62O43379 1518 aa31.7■■■□□ 2.67
KHSRP-211ENST00000599642 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
KHSRP-211ENST00000599642 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
KHSRP-211ENST00000599642 TOP2BQ02880 1626 aa31.64■■■□□ 2.66
KHSRP-211ENST00000599642 TOPBP1Q92547 1522 aa31.64■■■□□ 2.66
KHSRP-211ENST00000599642 CUX1P39880 1505 aa31.62■■■□□ 2.65
KHSRP-211ENST00000599642 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
KHSRP-211ENST00000599642 CUX2O14529 1486 aa31.48■■■□□ 2.63
KHSRP-211ENST00000599642 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
KHSRP-211ENST00000599642 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
KHSRP-211ENST00000599642 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
KHSRP-211ENST00000599642 TRIM41Q8WV44 630 aa31.38■■■□□ 2.61
KHSRP-211ENST00000599642 IFT140Q96RY7 1462 aa31.32■■■□□ 2.6
KHSRP-211ENST00000599642 WDR97A6NE52 1622 aa31.29■■■□□ 2.6
KHSRP-211ENST00000599642 TARBP1Q13395 1621 aaKnown RBP31.27■■■□□ 2.6
KHSRP-211ENST00000599642 SOGA1O94964 1423 aa31.27■■■□□ 2.6
KHSRP-211ENST00000599642 ABCA10Q8WWZ4 1543 aa31.24■■■□□ 2.59
KHSRP-211ENST00000599642 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.58
KHSRP-211ENST00000599642 KIF27Q86VH2 1401 aa31.05■■■□□ 2.56
KHSRP-211ENST00000599642 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
KHSRP-211ENST00000599642 EEA1Q15075 1411 aa31.04■■■□□ 2.56
KHSRP-211ENST00000599642 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
KHSRP-211ENST00000599642 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
KHSRP-211ENST00000599642 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
KHSRP-211ENST00000599642 ERICH3Q5RHP9 1530 aa30.93■■■□□ 2.54
KHSRP-211ENST00000599642 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
KHSRP-211ENST00000599642 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
KHSRP-211ENST00000599642 GRIN2BQ13224 1484 aa30.89■■■□□ 2.53
KHSRP-211ENST00000599642 AQRO60306 1485 aaKnown RBP eCLIP30.87■■■□□ 2.532e-6■□□□□ 10.2
KHSRP-211ENST00000599642 CUL7Q14999 1698 aa30.81■■■□□ 2.52
KHSRP-211ENST00000599642 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
KHSRP-211ENST00000599642 RUSC2Q8N2Y8 1516 aa30.77■■■□□ 2.52
KHSRP-211ENST00000599642 IGF1RP08069 1367 aa30.76■■■□□ 2.51
KHSRP-211ENST00000599642 CSRNP3Q8WYN3 585 aa30.7■■■□□ 2.51
KHSRP-211ENST00000599642 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
KHSRP-211ENST00000599642 FHAD1B1AJZ9 1412 aa30.65■■■□□ 2.5
KHSRP-211ENST00000599642 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
KHSRP-211ENST00000599642 PRXQ9BXM0 1461 aa30.62■■■□□ 2.49
KHSRP-211ENST00000599642 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
KHSRP-211ENST00000599642 KIF21BO75037 1637 aa30.61■■■□□ 2.49
KHSRP-211ENST00000599642 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
KHSRP-211ENST00000599642 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
KHSRP-211ENST00000599642 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
KHSRP-211ENST00000599642 GRIN2AQ12879 1464 aa30.47■■■□□ 2.47
KHSRP-211ENST00000599642 CHD1O14646 1710 aa30.47■■■□□ 2.47
KHSRP-211ENST00000599642 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
KHSRP-211ENST00000599642 GOLGA3Q08378 1498 aa30.41■■■□□ 2.46
KHSRP-211ENST00000599642 NUP160Q12769 1436 aa30.33■■■□□ 2.45
KHSRP-211ENST00000599642 CTTNBP2Q8WZ74 1663 aa30.32■■■□□ 2.44
KHSRP-211ENST00000599642 FBLN2P98095 1184 aa30.28■■■□□ 2.44
KHSRP-211ENST00000599642 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
KHSRP-211ENST00000599642 KIAA0586Q9BVV6 1533 aa30.23■■■□□ 2.43
KHSRP-211ENST00000599642 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms