RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
SYMPK-213ENST00000599460 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SYMPK-213ENST00000599460 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
SYMPK-213ENST00000599460 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
SYMPK-213ENST00000599460 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
SYMPK-213ENST00000599460 STK26Q9P289 416 aa19.53■□□□□ 0.72
SYMPK-213ENST00000599460 A0A0G2JS52 829 aa19.53■□□□□ 0.72
SYMPK-213ENST00000599460 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
SYMPK-213ENST00000599460 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
SYMPK-213ENST00000599460 WASHC2CQ9Y4E1 1318 aa19.52■□□□□ 0.72
SYMPK-213ENST00000599460 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
SYMPK-213ENST00000599460 LMOD2Q6P5Q4 547 aa19.52■□□□□ 0.71
SYMPK-213ENST00000599460 UNC13AQ9UPW8 1703 aa19.5■□□□□ 0.71
SYMPK-213ENST00000599460 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
SYMPK-213ENST00000599460 L3MBTL2Q969R5 705 aa19.49■□□□□ 0.71
SYMPK-213ENST00000599460 NUDCQ9Y266 331 aa19.48■□□□□ 0.71
SYMPK-213ENST00000599460 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
SYMPK-213ENST00000599460 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
SYMPK-213ENST00000599460 CASKIN1Q8WXD9 1431 aa19.46■□□□□ 0.71
SYMPK-213ENST00000599460 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
SYMPK-213ENST00000599460 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
SYMPK-213ENST00000599460 PRXQ9BXM0 1461 aa19.43■□□□□ 0.7
SYMPK-213ENST00000599460 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
SYMPK-213ENST00000599460 SNAPC4Q5SXM2 1469 aa19.43■□□□□ 0.7
SYMPK-213ENST00000599460 DHX57Q6P158 1386 aaKnown RBP19.42■□□□□ 0.7
SYMPK-213ENST00000599460 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
SYMPK-213ENST00000599460 MYOM3Q5VTT5 1437 aa19.42■□□□□ 0.7
SYMPK-213ENST00000599460 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
SYMPK-213ENST00000599460 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
SYMPK-213ENST00000599460 NUTM2DQ5VT03 806 aaPredicted RBP19.42■□□□□ 0.7
SYMPK-213ENST00000599460 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
SYMPK-213ENST00000599460 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
SYMPK-213ENST00000599460 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
SYMPK-213ENST00000599460 PHLDB1Q86UU1 1377 aa19.4■□□□□ 0.7
SYMPK-213ENST00000599460 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
SYMPK-213ENST00000599460 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
SYMPK-213ENST00000599460 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
SYMPK-213ENST00000599460 PEG3Q9GZU2 1588 aa19.37■□□□□ 0.69
SYMPK-213ENST00000599460 CCDC144AA2RUR9 1427 aa19.36■□□□□ 0.69
SYMPK-213ENST00000599460 SOX12O15370 315 aa19.36■□□□□ 0.69
SYMPK-213ENST00000599460 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
SYMPK-213ENST00000599460 NCOA2Q15596 1464 aa19.36■□□□□ 0.69
SYMPK-213ENST00000599460 SUPT16HQ9Y5B9 1047 aaKnown RBP19.36■□□□□ 0.69
SYMPK-213ENST00000599460 EIF3AQ14152 1382 aaKnown RBP19.35■□□□□ 0.69
SYMPK-213ENST00000599460 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
SYMPK-213ENST00000599460 HDGFL2Q7Z4V5 671 aaPredicted RBP19.34■□□□□ 0.69
SYMPK-213ENST00000599460 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
SYMPK-213ENST00000599460 KTN1Q86UP2 1357 aaKnown RBP19.33■□□□□ 0.69
SYMPK-213ENST00000599460 CCER2I3L3R5 266 aa19.32■□□□□ 0.68
SYMPK-213ENST00000599460 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
SYMPK-213ENST00000599460 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
SYMPK-213ENST00000599460 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
SYMPK-213ENST00000599460 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
SYMPK-213ENST00000599460 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
SYMPK-213ENST00000599460 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
SYMPK-213ENST00000599460 KIF15Q9NS87 1388 aa19.27■□□□□ 0.68
SYMPK-213ENST00000599460 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
SYMPK-213ENST00000599460 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
SYMPK-213ENST00000599460 UACAQ9BZF9 1416 aa19.24■□□□□ 0.67
SYMPK-213ENST00000599460 PAK3O75914 559 aaPredicted RBP19.23■□□□□ 0.67
SYMPK-213ENST00000599460 RALBP1Q15311 655 aa19.23■□□□□ 0.67
SYMPK-213ENST00000599460 ARXQ96QS3 562 aa19.23■□□□□ 0.67
SYMPK-213ENST00000599460 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
SYMPK-213ENST00000599460 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SYMPK-213ENST00000599460 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
SYMPK-213ENST00000599460 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
SYMPK-213ENST00000599460 URB2Q14146 1524 aaKnown RBP19.19■□□□□ 0.66
SYMPK-213ENST00000599460 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
SYMPK-213ENST00000599460 EHBP1L1Q8N3D4 1523 aa19.19■□□□□ 0.66
SYMPK-213ENST00000599460 VGFO15240 615 aaPredicted RBP19.18■□□□□ 0.66
SYMPK-213ENST00000599460 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
SYMPK-213ENST00000599460 TERF2IPQ9NYB0 399 aa19.18■□□□□ 0.66
SYMPK-213ENST00000599460 CUL7Q14999 1698 aa19.16■□□□□ 0.66
SYMPK-213ENST00000599460 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
SYMPK-213ENST00000599460 IQGAP2Q13576 1575 aa19.14■□□□□ 0.66
SYMPK-213ENST00000599460 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
SYMPK-213ENST00000599460 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
SYMPK-213ENST00000599460 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
SYMPK-213ENST00000599460 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
SYMPK-213ENST00000599460 NUTM2FA1L443 756 aa19.12■□□□□ 0.65
SYMPK-213ENST00000599460 USP47Q96K76 1375 aa19.11■□□□□ 0.65
SYMPK-213ENST00000599460 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
SYMPK-213ENST00000599460 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
SYMPK-213ENST00000599460 RTF1Q92541 710 aaKnown RBP19.1■□□□□ 0.65
SYMPK-213ENST00000599460 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
SYMPK-213ENST00000599460 MS4A1P11836 297 aa19.09■□□□□ 0.65
SYMPK-213ENST00000599460 PANK3Q9H999 370 aa19.08■□□□□ 0.64
SYMPK-213ENST00000599460 GRIN2AQ12879 1464 aa19.08■□□□□ 0.64
SYMPK-213ENST00000599460 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
SYMPK-213ENST00000599460 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
SYMPK-213ENST00000599460 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
SYMPK-213ENST00000599460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.64
SYMPK-213ENST00000599460 EPRSP07814 1512 aaKnown RBP19.06■□□□□ 0.64
SYMPK-213ENST00000599460 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
SYMPK-213ENST00000599460 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
SYMPK-213ENST00000599460 CHMP4BQ9H444 224 aaKnown RBP19.05■□□□□ 0.64
SYMPK-213ENST00000599460 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
SYMPK-213ENST00000599460 CSB-PGBD3P0DP91 1061 aa19.04■□□□□ 0.64
SYMPK-213ENST00000599460 SUPT6HQ7KZ85 1726 aaKnown RBP19.04■□□□□ 0.64
SYMPK-213ENST00000599460 EVC2Q86UK5 1308 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms