RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 TEX14Q8IWB6 1497 aa14.31□□□□□ -0.12
ZNF548-206ENST00000597047 GPATCH8Q9UKJ3 1502 aaKnown RBP14.31□□□□□ -0.12
ZNF548-206ENST00000597047 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
ZNF548-206ENST00000597047 FANCAO15360 1455 aa14.3□□□□□ -0.12
ZNF548-206ENST00000597047 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
ZNF548-206ENST00000597047 ZNF644Q9H582 1327 aaPredicted RBP14.29□□□□□ -0.12
ZNF548-206ENST00000597047 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
ZNF548-206ENST00000597047 PREX2Q70Z35 1606 aa14.28□□□□□ -0.12
ZNF548-206ENST00000597047 AKNAQ7Z591 1439 aa14.28□□□□□ -0.12
ZNF548-206ENST00000597047 PHLDB1Q86UU1 1377 aa14.28□□□□□ -0.12
ZNF548-206ENST00000597047 ITSN2Q9NZM3 1697 aa14.27□□□□□ -0.12
ZNF548-206ENST00000597047 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
ZNF548-206ENST00000597047 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
ZNF548-206ENST00000597047 ITGAEP38570 1179 aa14.25□□□□□ -0.13
ZNF548-206ENST00000597047 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
ZNF548-206ENST00000597047 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
ZNF548-206ENST00000597047 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
ZNF548-206ENST00000597047 KDM6BO15054 1643 aa14.23□□□□□ -0.13
ZNF548-206ENST00000597047 NEO1Q92859 1461 aa14.23□□□□□ -0.13
ZNF548-206ENST00000597047 SAMD9LQ8IVG5 1584 aa14.22□□□□□ -0.13
ZNF548-206ENST00000597047 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
ZNF548-206ENST00000597047 CAMSAP2Q08AD1 1489 aa14.2□□□□□ -0.14
ZNF548-206ENST00000597047 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
ZNF548-206ENST00000597047 FGD6Q6ZV73 1430 aa14.2□□□□□ -0.14
ZNF548-206ENST00000597047 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
ZNF548-206ENST00000597047 PTPN23Q9H3S7 1636 aa14.19□□□□□ -0.14
ZNF548-206ENST00000597047 DENND4BO75064 1496 aaPredicted RBP14.19□□□□□ -0.14
ZNF548-206ENST00000597047 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
ZNF548-206ENST00000597047 SYCP2Q9BX26 1530 aa14.19□□□□□ -0.14
ZNF548-206ENST00000597047 CHIC2Q9UKJ5 165 aa14.18□□□□□ -0.14
ZNF548-206ENST00000597047 MIA2Q96PC5 1412 aa14.17□□□□□ -0.14
ZNF548-206ENST00000597047 TRAPPC8Q9Y2L5 1435 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 ABCC1P33527 1531 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 ARHGEF12Q9NZN5 1544 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 TSPY4P0CV99 314 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 TSPY10P0CW01 314 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
ZNF548-206ENST00000597047 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
ZNF548-206ENST00000597047 POGZQ7Z3K3 1410 aa14.13□□□□□ -0.15
ZNF548-206ENST00000597047 RICTORQ6R327 1708 aa14.12□□□□□ -0.15
ZNF548-206ENST00000597047 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
ZNF548-206ENST00000597047 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
ZNF548-206ENST00000597047 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
ZNF548-206ENST00000597047 TCOF1Q13428 1488 aaKnown RBP14.1□□□□□ -0.15
ZNF548-206ENST00000597047 CCDC141Q6ZP82 1450 aa14.1□□□□□ -0.15
ZNF548-206ENST00000597047 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
ZNF548-206ENST00000597047 FRMPD1Q5SYB0 1578 aa14.09□□□□□ -0.15
ZNF548-206ENST00000597047 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
ZNF548-206ENST00000597047 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
ZNF548-206ENST00000597047 ABCC5O15440 1437 aa14.07□□□□□ -0.16
ZNF548-206ENST00000597047 DAPK1P53355 1430 aa14.07□□□□□ -0.16
ZNF548-206ENST00000597047 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
ZNF548-206ENST00000597047 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
ZNF548-206ENST00000597047 ARHGEF5Q12774 1597 aa14.06□□□□□ -0.16
ZNF548-206ENST00000597047 MLECQ14165 292 aa14.06□□□□□ -0.16
ZNF548-206ENST00000597047 C9orf84Q5VXU9 1444 aa14.06□□□□□ -0.16
ZNF548-206ENST00000597047 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
ZNF548-206ENST00000597047 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
ZNF548-206ENST00000597047 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
ZNF548-206ENST00000597047 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
ZNF548-206ENST00000597047 KDM5CP41229 1560 aa14.03□□□□□ -0.16
ZNF548-206ENST00000597047 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
ZNF548-206ENST00000597047 CROCC2H7BZ55 1655 aa14.02□□□□□ -0.16
ZNF548-206ENST00000597047 MLH3Q9UHC1 1453 aa14.02□□□□□ -0.16
ZNF548-206ENST00000597047 ZMYM4Q5VZL5 1548 aa14.01□□□□□ -0.17
ZNF548-206ENST00000597047 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
ZNF548-206ENST00000597047 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
ZNF548-206ENST00000597047 ATP10AO60312 1499 aa14□□□□□ -0.17
ZNF548-206ENST00000597047 MAGI2Q86UL8 1455 aa14□□□□□ -0.17
ZNF548-206ENST00000597047 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
ZNF548-206ENST00000597047 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
ZNF548-206ENST00000597047 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
ZNF548-206ENST00000597047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
ZNF548-206ENST00000597047 TRIM26Q12899 539 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-206ENST00000597047 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
ZNF548-206ENST00000597047 ARHGEF40Q8TER5 1519 aa13.99□□□□□ -0.17
ZNF548-206ENST00000597047 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
ZNF548-206ENST00000597047 KIF15Q9NS87 1388 aa13.98□□□□□ -0.17
ZNF548-206ENST00000597047 KIF3BO15066 747 aa13.98□□□□□ -0.17
ZNF548-206ENST00000597047 GGT6Q6P531 493 aa13.98□□□□□ -0.17
ZNF548-206ENST00000597047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
ZNF548-206ENST00000597047 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
ZNF548-206ENST00000597047 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
ZNF548-206ENST00000597047 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
ZNF548-206ENST00000597047 A2MP01023 1474 aa13.97□□□□□ -0.17
ZNF548-206ENST00000597047 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
ZNF548-206ENST00000597047 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
ZNF548-206ENST00000597047 NCOA1Q15788 1441 aa13.94□□□□□ -0.18
ZNF548-206ENST00000597047 ESF1Q9H501 851 aaKnown RBP13.94□□□□□ -0.18
ZNF548-206ENST00000597047 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
ZNF548-206ENST00000597047 TRIM52Q96A61 297 aa13.92□□□□□ -0.18
ZNF548-206ENST00000597047 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
ZNF548-206ENST00000597047 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
ZNF548-206ENST00000597047 DUOX2Q9NRD8 1548 aa13.91□□□□□ -0.18
ZNF548-206ENST00000597047 ADGRL2O95490 1459 aa13.91□□□□□ -0.18
ZNF548-206ENST00000597047 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
ZNF548-206ENST00000597047 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.19
ZNF548-206ENST00000597047 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
ZNF548-206ENST00000597047 NAIPQ13075 1403 aa13.86□□□□□ -0.19
ZNF548-206ENST00000597047 BCORL1Q5H9F3 1711 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms