RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 GPATCH8Q9UKJ3 1502 aaKnown RBP30.18■■■□□ 2.42
PNKP-207ENST00000596014 CCNB3Q8WWL7 1395 aa30.17■■■□□ 2.42
PNKP-207ENST00000596014 EFCAB2Q5VUJ9 269 aa30.17■■■□□ 2.42
PNKP-207ENST00000596014 CFAP74Q9C0B2 1584 aa30.16■■■□□ 2.42
PNKP-207ENST00000596014 COL17A1Q9UMD9 1497 aaPredicted RBP30.16■■■□□ 2.42
PNKP-207ENST00000596014 ARHGAP5Q13017 1502 aa30.16■■■□□ 2.42
PNKP-207ENST00000596014 AKNAQ7Z591 1439 aa30.14■■■□□ 2.42
PNKP-207ENST00000596014 CFDP1Q9UEE9 299 aaPredicted RBP30.08■■■□□ 2.41
PNKP-207ENST00000596014 ITSN2Q9NZM3 1697 aa30.08■■■□□ 2.41
PNKP-207ENST00000596014 ADGRL1O94910 1474 aa30.06■■■□□ 2.4
PNKP-207ENST00000596014 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
PNKP-207ENST00000596014 SCAPERQ9BY12 1400 aa30.02■■■□□ 2.4
PNKP-207ENST00000596014 RAPGEF3O95398 923 aa30.01■■■□□ 2.4
PNKP-207ENST00000596014 DENND4BO75064 1496 aaPredicted RBP30■■■□□ 2.39
PNKP-207ENST00000596014 SAMD9LQ8IVG5 1584 aa29.99■■■□□ 2.39
PNKP-207ENST00000596014 PPARGC1BQ86YN6 1023 aaKnown RBP29.98■■■□□ 2.39
PNKP-207ENST00000596014 MYOM3Q5VTT5 1437 aa29.97■■■□□ 2.39
PNKP-207ENST00000596014 RICTORQ6R327 1708 aa29.97■■■□□ 2.39
PNKP-207ENST00000596014 ABCC1P33527 1531 aa29.96■■■□□ 2.39
PNKP-207ENST00000596014 ZNF644Q9H582 1327 aaPredicted RBP29.95■■■□□ 2.39
PNKP-207ENST00000596014 FRMPD1Q5SYB0 1578 aa29.94■■■□□ 2.38
PNKP-207ENST00000596014 ARHGEF12Q9NZN5 1544 aa29.94■■■□□ 2.38
PNKP-207ENST00000596014 POGZQ7Z3K3 1410 aa29.92■■■□□ 2.38
PNKP-207ENST00000596014 PLEKHH2Q8IVE3 1493 aa29.91■■■□□ 2.38
PNKP-207ENST00000596014 MIA2Q96PC5 1412 aa29.91■■■□□ 2.38
PNKP-207ENST00000596014 KIAA1107Q9UPP5 1409 aa29.9■■■□□ 2.38
PNKP-207ENST00000596014 HNRNPMP52272 730 aaKnown RBP eCLIP29.89■■■□□ 2.38
PNKP-207ENST00000596014 SYCP2Q9BX26 1530 aa29.89■■■□□ 2.37
PNKP-207ENST00000596014 AFAP1Q8N556 730 aa29.88■■■□□ 2.37
PNKP-207ENST00000596014 CAMSAP2Q08AD1 1489 aa29.87■■■□□ 2.37
PNKP-207ENST00000596014 ZNF518AQ6AHZ1 1483 aa29.87■■■□□ 2.37
PNKP-207ENST00000596014 TRAPPC8Q9Y2L5 1435 aa29.87■■■□□ 2.37
PNKP-207ENST00000596014 ZMYM4Q5VZL5 1548 aa29.83■■■□□ 2.37
PNKP-207ENST00000596014 FGD6Q6ZV73 1430 aa29.82■■■□□ 2.36
PNKP-207ENST00000596014 MBD5Q9P267 1494 aa29.82■■■□□ 2.36
PNKP-207ENST00000596014 KDM5CP41229 1560 aa29.81■■■□□ 2.36
PNKP-207ENST00000596014 PTPN23Q9H3S7 1636 aa29.79■■■□□ 2.36
PNKP-207ENST00000596014 MAGI2Q86UL8 1455 aa29.77■■■□□ 2.36
PNKP-207ENST00000596014 RSPH4AQ5TD94 716 aa29.76■■■□□ 2.35
PNKP-207ENST00000596014 TCOF1Q13428 1488 aaKnown RBP29.73■■■□□ 2.35
PNKP-207ENST00000596014 MLH3Q9UHC1 1453 aa29.73■■■□□ 2.35
PNKP-207ENST00000596014 ARHGEF5Q12774 1597 aa29.73■■■□□ 2.35
PNKP-207ENST00000596014 HECW2Q9P2P5 1572 aa29.73■■■□□ 2.35
PNKP-207ENST00000596014 MYT1LQ9UL68 1186 aa29.72■■■□□ 2.35
PNKP-207ENST00000596014 YEATS2Q9ULM3 1422 aa29.72■■■□□ 2.35
PNKP-207ENST00000596014 ZFYVE16Q7Z3T8 1539 aa29.72■■■□□ 2.35
PNKP-207ENST00000596014 SPAG9O60271 1321 aaKnown RBP29.72■■■□□ 2.35
PNKP-207ENST00000596014 CCDC141Q6ZP82 1450 aa29.71■■■□□ 2.35
PNKP-207ENST00000596014 ARHGEF40Q8TER5 1519 aa29.7■■■□□ 2.35
PNKP-207ENST00000596014 KIDINS220Q9ULH0 1771 aa29.68■■■□□ 2.34
PNKP-207ENST00000596014 FAM50AQ14320 339 aaKnown RBP29.66■■■□□ 2.34
PNKP-207ENST00000596014 TSPY4P0CV99 314 aa29.64■■■□□ 2.34
PNKP-207ENST00000596014 TSPY10P0CW01 314 aa29.64■■■□□ 2.34
PNKP-207ENST00000596014 INO80Q9ULG1 1556 aaPredicted RBP29.64■■■□□ 2.34
PNKP-207ENST00000596014 ATP7AQ04656 1500 aa29.64■■■□□ 2.34
PNKP-207ENST00000596014 ABCA6Q8N139 1617 aa29.62■■■□□ 2.33
PNKP-207ENST00000596014 ATP10AO60312 1499 aa29.62■■■□□ 2.33
PNKP-207ENST00000596014 RTEL1-TNFRSF6BF6WH68 1400 aa29.61■■■□□ 2.33
PNKP-207ENST00000596014 DIP2CQ9Y2E4 1556 aa29.61■■■□□ 2.33
PNKP-207ENST00000596014 ABCC5O15440 1437 aa29.61■■■□□ 2.33
PNKP-207ENST00000596014 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
PNKP-207ENST00000596014 DAPK1P53355 1430 aa29.58■■■□□ 2.33
PNKP-207ENST00000596014 RRBP1Q9P2E9 1410 aaKnown RBP29.57■■■□□ 2.32
PNKP-207ENST00000596014 C9orf84Q5VXU9 1444 aa29.56■■■□□ 2.32
PNKP-207ENST00000596014 CROCC2H7BZ55 1655 aa29.56■■■□□ 2.32
PNKP-207ENST00000596014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.55■■■□□ 2.32
PNKP-207ENST00000596014 MAST1Q9Y2H9 1570 aa29.55■■■□□ 2.32
PNKP-207ENST00000596014 SIGLEC1Q9BZZ2 1709 aa29.53■■■□□ 2.32
PNKP-207ENST00000596014 SHANK2Q9UPX8 1470 aa29.52■■■□□ 2.32
PNKP-207ENST00000596014 ARID4BQ4LE39 1312 aaPredicted RBP29.52■■■□□ 2.32
PNKP-207ENST00000596014 REREQ9P2R6 1566 aa29.52■■■□□ 2.32
PNKP-207ENST00000596014 ADGBQ8N7X0 1667 aa29.49■■■□□ 2.31
PNKP-207ENST00000596014 A2MP01023 1474 aa29.47■■■□□ 2.31
PNKP-207ENST00000596014 CHIC2Q9UKJ5 165 aa29.47■■■□□ 2.31
PNKP-207ENST00000596014 PLXNC1O60486 1568 aa29.44■■■□□ 2.3
PNKP-207ENST00000596014 PTPRKQ15262 1439 aa29.44■■■□□ 2.3
PNKP-207ENST00000596014 ITGAEP38570 1179 aa29.43■■■□□ 2.3
PNKP-207ENST00000596014 AGLP35573 1532 aa29.42■■■□□ 2.3
PNKP-207ENST00000596014 DHX29Q7Z478 1369 aaKnown RBP29.42■■■□□ 2.3
PNKP-207ENST00000596014 BCORL1Q5H9F3 1711 aa29.4■■■□□ 2.3
PNKP-207ENST00000596014 KDM4FA0A1W2PPD8 638 aa29.4■■■□□ 2.3
PNKP-207ENST00000596014 ANKRD30AQ9BXX3 1397 aa29.39■■■□□ 2.3
PNKP-207ENST00000596014 RRP7BPQ9NSQ0 103 aa29.39■■■□□ 2.3
PNKP-207ENST00000596014 NCOA1Q15788 1441 aa29.39■■■□□ 2.3
PNKP-207ENST00000596014 ADGRL2O95490 1459 aa29.38■■■□□ 2.29
PNKP-207ENST00000596014 MLECQ14165 292 aa29.37■■■□□ 2.29
PNKP-207ENST00000596014 KIF15Q9NS87 1388 aa29.37■■■□□ 2.29
PNKP-207ENST00000596014 DUOX2Q9NRD8 1548 aa29.34■■■□□ 2.29
PNKP-207ENST00000596014 ADAMTSL3P82987 1691 aa29.34■■■□□ 2.29
PNKP-207ENST00000596014 ROCK1Q13464 1354 aa29.31■■■□□ 2.28
PNKP-207ENST00000596014 KIF3BO15066 747 aa29.3■■■□□ 2.28
PNKP-207ENST00000596014 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
PNKP-207ENST00000596014 GGT6Q6P531 493 aa29.26■■■□□ 2.27
PNKP-207ENST00000596014 ERBINQ96RT1 1412 aa29.25■■■□□ 2.27
PNKP-207ENST00000596014 EIF2AK4Q9P2K8 1649 aaKnown RBP29.25■■■□□ 2.27
PNKP-207ENST00000596014 FER1L4A9Z1Z3 1794 aa29.23■■■□□ 2.27
PNKP-207ENST00000596014 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.26
PNKP-207ENST00000596014 RIMS1Q86UR5 1692 aaKnown RBP29.19■■■□□ 2.26
PNKP-207ENST00000596014 PPP6R1Q9UPN7 881 aa29.18■■■□□ 2.26
PNKP-207ENST00000596014 RNF17Q9BXT8 1623 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms