RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 MYOM3Q5VTT5 1437 aa32.68■■■□□ 2.82
SCN1B-203ENST00000595652 TEX14Q8IWB6 1497 aa32.68■■■□□ 2.82
SCN1B-203ENST00000595652 ARAP3Q8WWN8 1544 aa32.68■■■□□ 2.82
SCN1B-203ENST00000595652 CFDP1Q9UEE9 299 aaPredicted RBP32.68■■■□□ 2.82
SCN1B-203ENST00000595652 FANCAO15360 1455 aa32.67■■■□□ 2.82
SCN1B-203ENST00000595652 ZNF777Q9ULD5 760 aaPredicted RBP32.66■■■□□ 2.82
SCN1B-203ENST00000595652 EFCAB2Q5VUJ9 269 aa32.65■■■□□ 2.82
SCN1B-203ENST00000595652 CFAP74Q9C0B2 1584 aa32.65■■■□□ 2.82
SCN1B-203ENST00000595652 NEO1Q92859 1461 aa32.6■■■□□ 2.81
SCN1B-203ENST00000595652 SAMD9LQ8IVG5 1584 aa32.59■■■□□ 2.81
SCN1B-203ENST00000595652 AKNAQ7Z591 1439 aa32.59■■■□□ 2.81
SCN1B-203ENST00000595652 FGD6Q6ZV73 1430 aa32.57■■■□□ 2.8
SCN1B-203ENST00000595652 ZNF644Q9H582 1327 aaPredicted RBP32.56■■■□□ 2.8
SCN1B-203ENST00000595652 PTPN23Q9H3S7 1636 aa32.55■■■□□ 2.8
SCN1B-203ENST00000595652 MIA2Q96PC5 1412 aa32.55■■■□□ 2.8
SCN1B-203ENST00000595652 ADGRL1O94910 1474 aa32.53■■■□□ 2.8
SCN1B-203ENST00000595652 CAMSAP2Q08AD1 1489 aa32.53■■■□□ 2.8
SCN1B-203ENST00000595652 ABCC1P33527 1531 aa32.51■■■□□ 2.79
SCN1B-203ENST00000595652 SYCP2Q9BX26 1530 aa32.48■■■□□ 2.79
SCN1B-203ENST00000595652 SCAPERQ9BY12 1400 aa32.48■■■□□ 2.79
SCN1B-203ENST00000595652 FAM50AQ14320 339 aaKnown RBP32.46■■■□□ 2.79
SCN1B-203ENST00000595652 PLEKHH2Q8IVE3 1493 aa32.45■■■□□ 2.79
SCN1B-203ENST00000595652 ARHGEF12Q9NZN5 1544 aa32.45■■■□□ 2.78
SCN1B-203ENST00000595652 KDM6BO15054 1643 aa32.44■■■□□ 2.78
SCN1B-203ENST00000595652 TCOF1Q13428 1488 aaKnown RBP32.44■■■□□ 2.78
SCN1B-203ENST00000595652 HNRNPMP52272 730 aaKnown RBP eCLIP32.44■■■□□ 2.78
SCN1B-203ENST00000595652 COL17A1Q9UMD9 1497 aaPredicted RBP32.42■■■□□ 2.78
SCN1B-203ENST00000595652 DENND4BO75064 1496 aaPredicted RBP32.42■■■□□ 2.78
SCN1B-203ENST00000595652 RRBP1Q9P2E9 1410 aaKnown RBP32.39■■■□□ 2.78
SCN1B-203ENST00000595652 KIAA1107Q9UPP5 1409 aa32.39■■■□□ 2.78
SCN1B-203ENST00000595652 TRAPPC8Q9Y2L5 1435 aa32.38■■■□□ 2.77
SCN1B-203ENST00000595652 RAPGEF3O95398 923 aa32.38■■■□□ 2.77
SCN1B-203ENST00000595652 RICTORQ6R327 1708 aa32.37■■■□□ 2.77
SCN1B-203ENST00000595652 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
SCN1B-203ENST00000595652 POGZQ7Z3K3 1410 aa32.35■■■□□ 2.77
SCN1B-203ENST00000595652 FRMPD1Q5SYB0 1578 aa32.35■■■□□ 2.77
SCN1B-203ENST00000595652 AFAP1Q8N556 730 aa32.33■■■□□ 2.77
SCN1B-203ENST00000595652 ARHGEF5Q12774 1597 aa32.32■■■□□ 2.77
SCN1B-203ENST00000595652 ZNF518AQ6AHZ1 1483 aa32.3■■■□□ 2.76
SCN1B-203ENST00000595652 CCDC141Q6ZP82 1450 aa32.3■■■□□ 2.76
SCN1B-203ENST00000595652 DNMT1P26358 1616 aaKnown RBP32.29■■■□□ 2.76
SCN1B-203ENST00000595652 ITGAEP38570 1179 aa32.26■■■□□ 2.75
SCN1B-203ENST00000595652 CROCC2H7BZ55 1655 aa32.26■■■□□ 2.75
SCN1B-203ENST00000595652 DAPK1P53355 1430 aa32.26■■■□□ 2.75
SCN1B-203ENST00000595652 KDM5CP41229 1560 aa32.25■■■□□ 2.75
SCN1B-203ENST00000595652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.25■■■□□ 2.75
SCN1B-203ENST00000595652 ABCC5O15440 1437 aa32.25■■■□□ 2.75
SCN1B-203ENST00000595652 MYT1LQ9UL68 1186 aa32.24■■■□□ 2.75
SCN1B-203ENST00000595652 RSPH4AQ5TD94 716 aa32.23■■■□□ 2.75
SCN1B-203ENST00000595652 SPAG9O60271 1321 aaKnown RBP32.21■■■□□ 2.75
SCN1B-203ENST00000595652 ZMYM4Q5VZL5 1548 aa32.21■■■□□ 2.75
SCN1B-203ENST00000595652 HECW2Q9P2P5 1572 aa32.2■■■□□ 2.75
SCN1B-203ENST00000595652 TSPY4P0CV99 314 aa32.19■■■□□ 2.74
SCN1B-203ENST00000595652 TSPY10P0CW01 314 aa32.19■■■□□ 2.74
SCN1B-203ENST00000595652 INO80Q9ULG1 1556 aaPredicted RBP32.16■■■□□ 2.74
SCN1B-203ENST00000595652 CHIC2Q9UKJ5 165 aa32.16■■■□□ 2.74
SCN1B-203ENST00000595652 KIDINS220Q9ULH0 1771 aa32.16■■■□□ 2.74
SCN1B-203ENST00000595652 C9orf84Q5VXU9 1444 aa32.16■■■□□ 2.74
SCN1B-203ENST00000595652 ATP7AQ04656 1500 aa32.16■■■□□ 2.74
SCN1B-203ENST00000595652 ZFYVE16Q7Z3T8 1539 aa32.15■■■□□ 2.74
SCN1B-203ENST00000595652 PTPRKQ15262 1439 aa32.14■■■□□ 2.74
SCN1B-203ENST00000595652 SHANK2Q9UPX8 1470 aa32.14■■■□□ 2.74
SCN1B-203ENST00000595652 MAST1Q9Y2H9 1570 aa32.14■■■□□ 2.74
SCN1B-203ENST00000595652 MLH3Q9UHC1 1453 aa32.13■■■□□ 2.73
SCN1B-203ENST00000595652 YEATS2Q9ULM3 1422 aa32.11■■■□□ 2.73
SCN1B-203ENST00000595652 ADGBQ8N7X0 1667 aa32.11■■■□□ 2.73
SCN1B-203ENST00000595652 ABCA6Q8N139 1617 aa32.09■■■□□ 2.73
SCN1B-203ENST00000595652 MAGI2Q86UL8 1455 aa32.09■■■□□ 2.73
SCN1B-203ENST00000595652 RTEL1-TNFRSF6BF6WH68 1400 aa32.08■■■□□ 2.73
SCN1B-203ENST00000595652 ARHGEF40Q8TER5 1519 aa32.07■■■□□ 2.72
SCN1B-203ENST00000595652 DIP2CQ9Y2E4 1556 aa32.06■■■□□ 2.72
SCN1B-203ENST00000595652 PLXNC1O60486 1568 aa32.02■■■□□ 2.72
SCN1B-203ENST00000595652 TRIM26Q12899 539 aaPredicted RBP32.01■■■□□ 2.71
SCN1B-203ENST00000595652 ANKRD30AQ9BXX3 1397 aa32.01■■■□□ 2.71
SCN1B-203ENST00000595652 ADGRL2O95490 1459 aa32■■■□□ 2.71
SCN1B-203ENST00000595652 RRP7BPQ9NSQ0 103 aa32■■■□□ 2.71
SCN1B-203ENST00000595652 ATP10AO60312 1499 aa31.97■■■□□ 2.71
SCN1B-203ENST00000595652 NCOA1Q15788 1441 aa31.97■■■□□ 2.71
SCN1B-203ENST00000595652 KIF15Q9NS87 1388 aa31.95■■■□□ 2.71
SCN1B-203ENST00000595652 ROCK1Q13464 1354 aa31.94■■■□□ 2.7
SCN1B-203ENST00000595652 A2MP01023 1474 aa31.93■■■□□ 2.7
SCN1B-203ENST00000595652 SIGLEC1Q9BZZ2 1709 aa31.9■■■□□ 2.7
SCN1B-203ENST00000595652 DUOX2Q9NRD8 1548 aa31.9■■■□□ 2.7
SCN1B-203ENST00000595652 DHX29Q7Z478 1369 aaKnown RBP31.87■■■□□ 2.69
SCN1B-203ENST00000595652 REREQ9P2R6 1566 aa31.86■■■□□ 2.69
SCN1B-203ENST00000595652 GCC2Q8IWJ2 1684 aa31.86■■■□□ 2.69
SCN1B-203ENST00000595652 ARID4BQ4LE39 1312 aaPredicted RBP31.83■■■□□ 2.69
SCN1B-203ENST00000595652 NAIPQ13075 1403 aa31.81■■■□□ 2.68
SCN1B-203ENST00000595652 HFM1A2PYH4 1435 aa31.8■■■□□ 2.68
SCN1B-203ENST00000595652 ERBINQ96RT1 1412 aa31.79■■■□□ 2.68
SCN1B-203ENST00000595652 ANKRD50Q9ULJ7 1429 aa31.79■■■□□ 2.68
SCN1B-203ENST00000595652 AGLP35573 1532 aa31.76■■■□□ 2.68
SCN1B-203ENST00000595652 EIF2AK4Q9P2K8 1649 aaKnown RBP31.76■■■□□ 2.67
SCN1B-203ENST00000595652 KIF3BO15066 747 aa31.76■■■□□ 2.67
SCN1B-203ENST00000595652 MLECQ14165 292 aa31.75■■■□□ 2.67
SCN1B-203ENST00000595652 PCGF6Q9BYE7 350 aa31.75■■■□□ 2.67
SCN1B-203ENST00000595652 BCORL1Q5H9F3 1711 aa31.72■■■□□ 2.67
SCN1B-203ENST00000595652 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
SCN1B-203ENST00000595652 GGT6Q6P531 493 aa31.68■■■□□ 2.66
SCN1B-203ENST00000595652 RNF17Q9BXT8 1623 aaKnown RBP31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms