RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-226ENST00000591534 RAPGEF3O95398 923 aa15.63■□□□□ 0.09
BRCA1-226ENST00000591534 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
BRCA1-226ENST00000591534 APLP2Q06481 763 aa15.62■□□□□ 0.09
BRCA1-226ENST00000591534 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-226ENST00000591534 NUP153P49790 1475 aaKnown RBP15.61■□□□□ 0.09
BRCA1-226ENST00000591534 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
BRCA1-226ENST00000591534 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-226ENST00000591534 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
BRCA1-226ENST00000591534 KIF21BO75037 1637 aa15.57■□□□□ 0.08
BRCA1-226ENST00000591534 DENND4BO75064 1496 aaPredicted RBP15.56■□□□□ 0.08
BRCA1-226ENST00000591534 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
BRCA1-226ENST00000591534 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
BRCA1-226ENST00000591534 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
BRCA1-226ENST00000591534 FANCAO15360 1455 aa15.53■□□□□ 0.08
BRCA1-226ENST00000591534 PTPRMP28827 1452 aa15.53■□□□□ 0.08
BRCA1-226ENST00000591534 POGZQ7Z3K3 1410 aa15.52■□□□□ 0.08
BRCA1-226ENST00000591534 ATP1B4Q9UN42 357 aaPredicted RBP15.52■□□□□ 0.08
BRCA1-226ENST00000591534 CFAP74Q9C0B2 1584 aa15.51■□□□□ 0.07
BRCA1-226ENST00000591534 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
BRCA1-226ENST00000591534 ADAMTSL3P82987 1691 aa15.48■□□□□ 0.07
BRCA1-226ENST00000591534 CAPN15O75808 1086 aa15.48■□□□□ 0.07
BRCA1-226ENST00000591534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
BRCA1-226ENST00000591534 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
BRCA1-226ENST00000591534 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
BRCA1-226ENST00000591534 FRMPD1Q5SYB0 1578 aa15.45■□□□□ 0.06
BRCA1-226ENST00000591534 PLCH2O75038 1416 aa15.45■□□□□ 0.06
BRCA1-226ENST00000591534 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
BRCA1-226ENST00000591534 BCORL1Q5H9F3 1711 aa15.44■□□□□ 0.06
BRCA1-226ENST00000591534 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
BRCA1-226ENST00000591534 FBXO41Q8TF61 875 aa15.43■□□□□ 0.06
BRCA1-226ENST00000591534 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
BRCA1-226ENST00000591534 CDK13Q14004 1512 aaKnown RBP15.42■□□□□ 0.06
BRCA1-226ENST00000591534 ZMYM4Q5VZL5 1548 aa15.42■□□□□ 0.06
BRCA1-226ENST00000591534 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
BRCA1-226ENST00000591534 CLIP1P30622 1438 aa15.41■□□□□ 0.06
BRCA1-226ENST00000591534 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
BRCA1-226ENST00000591534 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
BRCA1-226ENST00000591534 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
BRCA1-226ENST00000591534 PCF11O94913 1555 aaKnown RBP15.4■□□□□ 0.06
BRCA1-226ENST00000591534 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
BRCA1-226ENST00000591534 POLA2Q14181 598 aa15.39■□□□□ 0.05
BRCA1-226ENST00000591534 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
BRCA1-226ENST00000591534 MLECQ14165 292 aa15.38■□□□□ 0.05
BRCA1-226ENST00000591534 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
BRCA1-226ENST00000591534 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
BRCA1-226ENST00000591534 DSG3P32926 999 aa15.37■□□□□ 0.05
BRCA1-226ENST00000591534 TROQ12816 1431 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-226ENST00000591534 ATP10AO60312 1499 aa15.36■□□□□ 0.05
BRCA1-226ENST00000591534 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
BRCA1-226ENST00000591534 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
BRCA1-226ENST00000591534 ZNF518AQ6AHZ1 1483 aa15.34■□□□□ 0.05
BRCA1-226ENST00000591534 RIMS1Q86UR5 1692 aaKnown RBP15.34■□□□□ 0.05
BRCA1-226ENST00000591534 KIF14Q15058 1648 aa15.33■□□□□ 0.04
BRCA1-226ENST00000591534 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
BRCA1-226ENST00000591534 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
BRCA1-226ENST00000591534 HSPA2P54652 639 aa15.31■□□□□ 0.04
BRCA1-226ENST00000591534 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
BRCA1-226ENST00000591534 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
BRCA1-226ENST00000591534 MYO5CQ9NQX4 1742 aa15.3■□□□□ 0.04
BRCA1-226ENST00000591534 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
BRCA1-226ENST00000591534 ABCB7O75027 752 aa15.28■□□□□ 0.04
BRCA1-226ENST00000591534 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.04
BRCA1-226ENST00000591534 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.03
BRCA1-226ENST00000591534 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
BRCA1-226ENST00000591534 MLH3Q9UHC1 1453 aa15.24■□□□□ 0.03
BRCA1-226ENST00000591534 FER1L4A9Z1Z3 1794 aa15.24■□□□□ 0.03
BRCA1-226ENST00000591534 KDM5CP41229 1560 aa15.24■□□□□ 0.03
BRCA1-226ENST00000591534 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-226ENST00000591534 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
BRCA1-226ENST00000591534 UHRF1BP1Q6BDS2 1440 aa15.21■□□□□ 0.03
BRCA1-226ENST00000591534 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
BRCA1-226ENST00000591534 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
BRCA1-226ENST00000591534 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-226ENST00000591534 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
BRCA1-226ENST00000591534 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
BRCA1-226ENST00000591534 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 TRAPPC8Q9Y2L5 1435 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 AGLP35573 1532 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 DIP2CQ9Y2E4 1556 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 ABCC1P33527 1531 aa15.17■□□□□ 0.02
BRCA1-226ENST00000591534 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
BRCA1-226ENST00000591534 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
BRCA1-226ENST00000591534 CFDP1Q9UEE9 299 aaPredicted RBP15.16■□□□□ 0.02
BRCA1-226ENST00000591534 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
BRCA1-226ENST00000591534 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
BRCA1-226ENST00000591534 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
BRCA1-226ENST00000591534 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
BRCA1-226ENST00000591534 KIAA1107Q9UPP5 1409 aa15.12■□□□□ 0.01
BRCA1-226ENST00000591534 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
BRCA1-226ENST00000591534 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
BRCA1-226ENST00000591534 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
BRCA1-226ENST00000591534 LRRIQ1Q96JM4 1722 aa15.11■□□□□ 0.01
BRCA1-226ENST00000591534 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
BRCA1-226ENST00000591534 ITSN2Q9NZM3 1697 aa15.1■□□□□ 0.01
BRCA1-226ENST00000591534 PTPRTO14522 1441 aa15.09■□□□□ 0.01
BRCA1-226ENST00000591534 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
BRCA1-226ENST00000591534 NPATQ14207 1427 aa15.08■□□□□ 0
BRCA1-226ENST00000591534 ZMYM3Q14202 1370 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms