RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 NEO1Q92859 1461 aa18.72■□□□□ 0.59
APOC1-206ENST00000590334 ARHGAP5Q13017 1502 aa18.72■□□□□ 0.59
APOC1-206ENST00000590334 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
APOC1-206ENST00000590334 FANCAO15360 1455 aa18.71■□□□□ 0.59
APOC1-206ENST00000590334 PHLDB1Q86UU1 1377 aa18.7■□□□□ 0.58
APOC1-206ENST00000590334 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
APOC1-206ENST00000590334 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
APOC1-206ENST00000590334 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
APOC1-206ENST00000590334 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
APOC1-206ENST00000590334 PTPN23Q9H3S7 1636 aa18.66■□□□□ 0.58
APOC1-206ENST00000590334 AKNAQ7Z591 1439 aa18.66■□□□□ 0.58
APOC1-206ENST00000590334 ABCC1P33527 1531 aa18.65■□□□□ 0.58
APOC1-206ENST00000590334 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
APOC1-206ENST00000590334 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
APOC1-206ENST00000590334 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
APOC1-206ENST00000590334 CAMSAP2Q08AD1 1489 aa18.62■□□□□ 0.57
APOC1-206ENST00000590334 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
APOC1-206ENST00000590334 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
APOC1-206ENST00000590334 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
APOC1-206ENST00000590334 KDM6BO15054 1643 aa18.6■□□□□ 0.57
APOC1-206ENST00000590334 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
APOC1-206ENST00000590334 SYCP2Q9BX26 1530 aa18.59■□□□□ 0.57
APOC1-206ENST00000590334 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
APOC1-206ENST00000590334 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
APOC1-206ENST00000590334 FRMPD1Q5SYB0 1578 aa18.58■□□□□ 0.56
APOC1-206ENST00000590334 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
APOC1-206ENST00000590334 COL17A1Q9UMD9 1497 aaPredicted RBP18.57■□□□□ 0.56
APOC1-206ENST00000590334 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
APOC1-206ENST00000590334 ZNF644Q9H582 1327 aaPredicted RBP18.56■□□□□ 0.56
APOC1-206ENST00000590334 ZNF777Q9ULD5 760 aaPredicted RBP18.56■□□□□ 0.56
APOC1-206ENST00000590334 MBD5Q9P267 1494 aa18.56■□□□□ 0.56
APOC1-206ENST00000590334 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
APOC1-206ENST00000590334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
APOC1-206ENST00000590334 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
APOC1-206ENST00000590334 DNMT1P26358 1616 aaKnown RBP18.55■□□□□ 0.56
APOC1-206ENST00000590334 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
APOC1-206ENST00000590334 KDM5CP41229 1560 aa18.55■□□□□ 0.56
APOC1-206ENST00000590334 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
APOC1-206ENST00000590334 ZMYM4Q5VZL5 1548 aa18.53■□□□□ 0.56
APOC1-206ENST00000590334 TRAPPC8Q9Y2L5 1435 aa18.51■□□□□ 0.55
APOC1-206ENST00000590334 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
APOC1-206ENST00000590334 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
APOC1-206ENST00000590334 RSPH4AQ5TD94 716 aa18.49■□□□□ 0.55
APOC1-206ENST00000590334 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
APOC1-206ENST00000590334 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
APOC1-206ENST00000590334 MAST1Q9Y2H9 1570 aa18.49■□□□□ 0.55
APOC1-206ENST00000590334 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
APOC1-206ENST00000590334 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
APOC1-206ENST00000590334 SHANK2Q9UPX8 1470 aa18.46■□□□□ 0.55
APOC1-206ENST00000590334 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
APOC1-206ENST00000590334 DAPK1P53355 1430 aa18.46■□□□□ 0.55
APOC1-206ENST00000590334 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.54
APOC1-206ENST00000590334 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.54
APOC1-206ENST00000590334 AFAP1Q8N556 730 aa18.45■□□□□ 0.54
APOC1-206ENST00000590334 ABCC5O15440 1437 aa18.45■□□□□ 0.54
APOC1-206ENST00000590334 ZFYVE16Q7Z3T8 1539 aa18.44■□□□□ 0.54
APOC1-206ENST00000590334 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
APOC1-206ENST00000590334 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
APOC1-206ENST00000590334 RTEL1-TNFRSF6BF6WH68 1400 aa18.43■□□□□ 0.54
APOC1-206ENST00000590334 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
APOC1-206ENST00000590334 ABCA6Q8N139 1617 aa18.41■□□□□ 0.54
APOC1-206ENST00000590334 ARHGEF40Q8TER5 1519 aa18.41■□□□□ 0.54
APOC1-206ENST00000590334 C9orf84Q5VXU9 1444 aa18.4■□□□□ 0.54
APOC1-206ENST00000590334 DIP2CQ9Y2E4 1556 aa18.39■□□□□ 0.53
APOC1-206ENST00000590334 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
APOC1-206ENST00000590334 ADGRL2O95490 1459 aa18.39■□□□□ 0.53
APOC1-206ENST00000590334 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
APOC1-206ENST00000590334 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
APOC1-206ENST00000590334 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
APOC1-206ENST00000590334 REREQ9P2R6 1566 aa18.37■□□□□ 0.53
APOC1-206ENST00000590334 YEATS2Q9ULM3 1422 aa18.35■□□□□ 0.53
APOC1-206ENST00000590334 ROCK1Q13464 1354 aa18.33■□□□□ 0.53
APOC1-206ENST00000590334 ATP10AO60312 1499 aa18.33■□□□□ 0.52
APOC1-206ENST00000590334 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
APOC1-206ENST00000590334 SIGLEC1Q9BZZ2 1709 aa18.32■□□□□ 0.52
APOC1-206ENST00000590334 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
APOC1-206ENST00000590334 BCORL1Q5H9F3 1711 aa18.31■□□□□ 0.52
APOC1-206ENST00000590334 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
APOC1-206ENST00000590334 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
APOC1-206ENST00000590334 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
APOC1-206ENST00000590334 A2MP01023 1474 aa18.28■□□□□ 0.52
APOC1-206ENST00000590334 ITGAEP38570 1179 aa18.28■□□□□ 0.52
APOC1-206ENST00000590334 CHIC2Q9UKJ5 165 aa18.27■□□□□ 0.52
APOC1-206ENST00000590334 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
APOC1-206ENST00000590334 AGLP35573 1532 aa18.27■□□□□ 0.51
APOC1-206ENST00000590334 KIF15Q9NS87 1388 aa18.27■□□□□ 0.51
APOC1-206ENST00000590334 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
APOC1-206ENST00000590334 DHX29Q7Z478 1369 aaKnown RBP18.26■□□□□ 0.51
APOC1-206ENST00000590334 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
APOC1-206ENST00000590334 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
APOC1-206ENST00000590334 RRP7BPQ9NSQ0 103 aa18.23■□□□□ 0.51
APOC1-206ENST00000590334 RNF17Q9BXT8 1623 aaKnown RBP18.22■□□□□ 0.51
APOC1-206ENST00000590334 NAIPQ13075 1403 aa18.22■□□□□ 0.51
APOC1-206ENST00000590334 DEPDC5O75140 1603 aa18.21■□□□□ 0.51
APOC1-206ENST00000590334 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
APOC1-206ENST00000590334 UNC13BO14795 1591 aa18.17■□□□□ 0.5
APOC1-206ENST00000590334 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
APOC1-206ENST00000590334 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
APOC1-206ENST00000590334 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
APOC1-206ENST00000590334 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms