RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 FANCAO15360 1455 aa19.99■□□□□ 0.79
DDX39A-213ENST00000590315 PLCH2O75038 1416 aa19.97■□□□□ 0.79
DDX39A-213ENST00000590315 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
DDX39A-213ENST00000590315 GPATCH8Q9UKJ3 1502 aaKnown RBP19.95■□□□□ 0.78
DDX39A-213ENST00000590315 NEO1Q92859 1461 aa19.94■□□□□ 0.78
DDX39A-213ENST00000590315 ZNF777Q9ULD5 760 aaPredicted RBP19.94■□□□□ 0.78
DDX39A-213ENST00000590315 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
DDX39A-213ENST00000590315 EFCAB2Q5VUJ9 269 aa19.91■□□□□ 0.78
DDX39A-213ENST00000590315 CFDP1Q9UEE9 299 aaPredicted RBP19.91■□□□□ 0.78
DDX39A-213ENST00000590315 AKNAQ7Z591 1439 aa19.91■□□□□ 0.78
DDX39A-213ENST00000590315 ADGRL1O94910 1474 aa19.91■□□□□ 0.78
DDX39A-213ENST00000590315 MYOM3Q5VTT5 1437 aa19.89■□□□□ 0.77
DDX39A-213ENST00000590315 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
DDX39A-213ENST00000590315 ABCC1P33527 1531 aa19.88■□□□□ 0.77
DDX39A-213ENST00000590315 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
DDX39A-213ENST00000590315 SYCP2Q9BX26 1530 aa19.86■□□□□ 0.77
DDX39A-213ENST00000590315 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
DDX39A-213ENST00000590315 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
DDX39A-213ENST00000590315 DENND4BO75064 1496 aaPredicted RBP19.84■□□□□ 0.77
DDX39A-213ENST00000590315 SCAPERQ9BY12 1400 aa19.84■□□□□ 0.77
DDX39A-213ENST00000590315 PLEKHH2Q8IVE3 1493 aa19.83■□□□□ 0.76
DDX39A-213ENST00000590315 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.76
DDX39A-213ENST00000590315 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
DDX39A-213ENST00000590315 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
DDX39A-213ENST00000590315 MIA2Q96PC5 1412 aa19.8■□□□□ 0.76
DDX39A-213ENST00000590315 ZNF644Q9H582 1327 aaPredicted RBP19.78■□□□□ 0.76
DDX39A-213ENST00000590315 POGZQ7Z3K3 1410 aa19.78■□□□□ 0.76
DDX39A-213ENST00000590315 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
DDX39A-213ENST00000590315 RAPGEF3O95398 923 aa19.77■□□□□ 0.76
DDX39A-213ENST00000590315 ZNF518AQ6AHZ1 1483 aa19.77■□□□□ 0.76
DDX39A-213ENST00000590315 CROCC2H7BZ55 1655 aa19.77■□□□□ 0.76
DDX39A-213ENST00000590315 ARHGEF12Q9NZN5 1544 aa19.76■□□□□ 0.75
DDX39A-213ENST00000590315 HECW2Q9P2P5 1572 aa19.76■□□□□ 0.75
DDX39A-213ENST00000590315 HNRNPMP52272 730 aaKnown RBP eCLIP19.76■□□□□ 0.755e-15■■■■■ 31.6
DDX39A-213ENST00000590315 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
DDX39A-213ENST00000590315 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
DDX39A-213ENST00000590315 ARHGEF5Q12774 1597 aa19.74■□□□□ 0.75
DDX39A-213ENST00000590315 ZMYM4Q5VZL5 1548 aa19.73■□□□□ 0.75
DDX39A-213ENST00000590315 KDM5CP41229 1560 aa19.73■□□□□ 0.75
DDX39A-213ENST00000590315 KIAA1107Q9UPP5 1409 aa19.72■□□□□ 0.75
DDX39A-213ENST00000590315 DNMT1P26358 1616 aaKnown RBP19.72■□□□□ 0.75
DDX39A-213ENST00000590315 TCOF1Q13428 1488 aaKnown RBP19.72■□□□□ 0.75
DDX39A-213ENST00000590315 CCDC141Q6ZP82 1450 aa19.72■□□□□ 0.75
DDX39A-213ENST00000590315 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
DDX39A-213ENST00000590315 AFAP1Q8N556 730 aa19.7■□□□□ 0.74
DDX39A-213ENST00000590315 ARHGEF40Q8TER5 1519 aa19.7■□□□□ 0.74
DDX39A-213ENST00000590315 KIDINS220Q9ULH0 1771 aa19.7■□□□□ 0.74
DDX39A-213ENST00000590315 ADGBQ8N7X0 1667 aa19.69■□□□□ 0.74
DDX39A-213ENST00000590315 INO80Q9ULG1 1556 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-213ENST00000590315 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
DDX39A-213ENST00000590315 ABCA6Q8N139 1617 aa19.68■□□□□ 0.74
DDX39A-213ENST00000590315 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
DDX39A-213ENST00000590315 SPAG9O60271 1321 aaKnown RBP19.66■□□□□ 0.74
DDX39A-213ENST00000590315 MAGI2Q86UL8 1455 aa19.64■□□□□ 0.73
DDX39A-213ENST00000590315 DIP2CQ9Y2E4 1556 aa19.64■□□□□ 0.73
DDX39A-213ENST00000590315 DAPK1P53355 1430 aa19.63■□□□□ 0.73
DDX39A-213ENST00000590315 YEATS2Q9ULM3 1422 aa19.63■□□□□ 0.73
DDX39A-213ENST00000590315 ITGAEP38570 1179 aa19.63■□□□□ 0.73
DDX39A-213ENST00000590315 MAST1Q9Y2H9 1570 aa19.62■□□□□ 0.73
DDX39A-213ENST00000590315 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
DDX39A-213ENST00000590315 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
DDX39A-213ENST00000590315 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
DDX39A-213ENST00000590315 MLH3Q9UHC1 1453 aa19.61■□□□□ 0.73
DDX39A-213ENST00000590315 RSPH4AQ5TD94 716 aa19.61■□□□□ 0.73
DDX39A-213ENST00000590315 C9orf84Q5VXU9 1444 aa19.6■□□□□ 0.73
DDX39A-213ENST00000590315 ABCC5O15440 1437 aa19.59■□□□□ 0.73
DDX39A-213ENST00000590315 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
DDX39A-213ENST00000590315 PLXNC1O60486 1568 aa19.58■□□□□ 0.73
DDX39A-213ENST00000590315 SIGLEC1Q9BZZ2 1709 aa19.56■□□□□ 0.72
DDX39A-213ENST00000590315 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
DDX39A-213ENST00000590315 ATP10AO60312 1499 aa19.55■□□□□ 0.72
DDX39A-213ENST00000590315 ARID4BQ4LE39 1312 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-213ENST00000590315 RTEL1-TNFRSF6BF6WH68 1400 aa19.54■□□□□ 0.72
DDX39A-213ENST00000590315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDX39A-213ENST00000590315 A2MP01023 1474 aa19.51■□□□□ 0.71
DDX39A-213ENST00000590315 REREQ9P2R6 1566 aa19.51■□□□□ 0.71
DDX39A-213ENST00000590315 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
DDX39A-213ENST00000590315 BCORL1Q5H9F3 1711 aa19.49■□□□□ 0.71
DDX39A-213ENST00000590315 FER1L4A9Z1Z3 1794 aa19.48■□□□□ 0.71
DDX39A-213ENST00000590315 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
DDX39A-213ENST00000590315 KIF15Q9NS87 1388 aa19.47■□□□□ 0.71
DDX39A-213ENST00000590315 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
DDX39A-213ENST00000590315 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
DDX39A-213ENST00000590315 RRP7BPQ9NSQ0 103 aa19.47■□□□□ 0.71
DDX39A-213ENST00000590315 PTPRKQ15262 1439 aa19.47■□□□□ 0.71
DDX39A-213ENST00000590315 EIF2AK4Q9P2K8 1649 aaKnown RBP19.46■□□□□ 0.71
DDX39A-213ENST00000590315 MLECQ14165 292 aa19.45■□□□□ 0.7
DDX39A-213ENST00000590315 RIMS1Q86UR5 1692 aaKnown RBP19.43■□□□□ 0.7
DDX39A-213ENST00000590315 AGLP35573 1532 aa19.42■□□□□ 0.7
DDX39A-213ENST00000590315 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
DDX39A-213ENST00000590315 MADDQ8WXG6 1647 aa19.41■□□□□ 0.7
DDX39A-213ENST00000590315 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
DDX39A-213ENST00000590315 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
DDX39A-213ENST00000590315 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
DDX39A-213ENST00000590315 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.69
DDX39A-213ENST00000590315 CEP152O94986 1710 aa19.39■□□□□ 0.69
DDX39A-213ENST00000590315 KIF3BO15066 747 aa19.38■□□□□ 0.69
DDX39A-213ENST00000590315 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
DDX39A-213ENST00000590315 RNF17Q9BXT8 1623 aaKnown RBP19.38■□□□□ 0.69
DDX39A-213ENST00000590315 ANKRD50Q9ULJ7 1429 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms