RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NEO1Q92859 1461 aa30.31■■■□□ 2.44
CIRBP-220ENST00000588917 GPATCH8Q9UKJ3 1502 aaKnown RBP30.31■■■□□ 2.44
CIRBP-220ENST00000588917 MYO5CQ9NQX4 1742 aa30.3■■■□□ 2.44
CIRBP-220ENST00000588917 CFDP1Q9UEE9 299 aaPredicted RBP30.3■■■□□ 2.44
CIRBP-220ENST00000588917 FANCAO15360 1455 aa30.3■■■□□ 2.44
CIRBP-220ENST00000588917 ARHGAP5Q13017 1502 aa30.27■■■□□ 2.44
CIRBP-220ENST00000588917 CFAP74Q9C0B2 1584 aa30.25■■■□□ 2.43
CIRBP-220ENST00000588917 AKNAQ7Z591 1439 aa30.24■■■□□ 2.43
CIRBP-220ENST00000588917 PREX2Q70Z35 1606 aa30.22■■■□□ 2.43
CIRBP-220ENST00000588917 ZNF777Q9ULD5 760 aaPredicted RBP30.21■■■□□ 2.43
CIRBP-220ENST00000588917 CDC42BPAQ5VT25 1732 aa30.2■■■□□ 2.43
CIRBP-220ENST00000588917 CDC42BPBQ9Y5S2 1711 aa30.19■■■□□ 2.42
CIRBP-220ENST00000588917 ITSN2Q9NZM3 1697 aa30.18■■■□□ 2.42
CIRBP-220ENST00000588917 RAPGEF3O95398 923 aa30.18■■■□□ 2.42
CIRBP-220ENST00000588917 PPARGC1BQ86YN6 1023 aaKnown RBP30.18■■■□□ 2.42
CIRBP-220ENST00000588917 MYOM3Q5VTT5 1437 aa30.17■■■□□ 2.42
CIRBP-220ENST00000588917 MIA2Q96PC5 1412 aa30.15■■■□□ 2.42
CIRBP-220ENST00000588917 SCAPERQ9BY12 1400 aa30.13■■■□□ 2.41
CIRBP-220ENST00000588917 PLEKHH2Q8IVE3 1493 aa30.12■■■□□ 2.41
CIRBP-220ENST00000588917 HECW2Q9P2P5 1572 aa30.11■■■□□ 2.41
CIRBP-220ENST00000588917 DENND4BO75064 1496 aaPredicted RBP30.11■■■□□ 2.41
CIRBP-220ENST00000588917 RSPH4AQ5TD94 716 aa30.09■■■□□ 2.41
CIRBP-220ENST00000588917 KIAA1107Q9UPP5 1409 aa30.09■■■□□ 2.41
CIRBP-220ENST00000588917 ZNF644Q9H582 1327 aaPredicted RBP30.05■■■□□ 2.4
CIRBP-220ENST00000588917 HNRNPMP52272 730 aaKnown RBP eCLIP30.04■■■□□ 2.4
CIRBP-220ENST00000588917 ILDR1Q86SU0 546 aaPredicted RBP30.03■■■□□ 2.4
CIRBP-220ENST00000588917 FGD6Q6ZV73 1430 aa30.03■■■□□ 2.4
CIRBP-220ENST00000588917 SAMD9LQ8IVG5 1584 aa30.03■■■□□ 2.4
CIRBP-220ENST00000588917 ABCC1P33527 1531 aa30.01■■■□□ 2.4
CIRBP-220ENST00000588917 ZNF518AQ6AHZ1 1483 aa29.99■■■□□ 2.39
CIRBP-220ENST00000588917 AFAP1Q8N556 730 aa29.99■■■□□ 2.39
CIRBP-220ENST00000588917 CAMSAP2Q08AD1 1489 aa29.99■■■□□ 2.39
CIRBP-220ENST00000588917 ARID4BQ4LE39 1312 aaPredicted RBP29.98■■■□□ 2.39
CIRBP-220ENST00000588917 POGZQ7Z3K3 1410 aa29.98■■■□□ 2.39
CIRBP-220ENST00000588917 FRMPD1Q5SYB0 1578 aa29.97■■■□□ 2.39
CIRBP-220ENST00000588917 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
CIRBP-220ENST00000588917 SYCP2Q9BX26 1530 aa29.94■■■□□ 2.38
CIRBP-220ENST00000588917 TRAPPC8Q9Y2L5 1435 aa29.94■■■□□ 2.38
CIRBP-220ENST00000588917 PTPRMP28827 1452 aa29.93■■■□□ 2.38
CIRBP-220ENST00000588917 MBD5Q9P267 1494 aa29.93■■■□□ 2.38
CIRBP-220ENST00000588917 TSPY4P0CV99 314 aa29.93■■■□□ 2.38
CIRBP-220ENST00000588917 TSPY10P0CW01 314 aa29.93■■■□□ 2.38
CIRBP-220ENST00000588917 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
CIRBP-220ENST00000588917 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
CIRBP-220ENST00000588917 ADAMTSL3P82987 1691 aa29.92■■■□□ 2.38
CIRBP-220ENST00000588917 FAM50AQ14320 339 aaKnown RBP29.92■■■□□ 2.38
CIRBP-220ENST00000588917 MYT1LQ9UL68 1186 aa29.92■■■□□ 2.38
CIRBP-220ENST00000588917 MAGI2Q86UL8 1455 aa29.92■■■□□ 2.38
CIRBP-220ENST00000588917 RICTORQ6R327 1708 aa29.91■■■□□ 2.38
CIRBP-220ENST00000588917 SPAG9O60271 1321 aaKnown RBP29.89■■■□□ 2.38
CIRBP-220ENST00000588917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.88■■■□□ 2.37
CIRBP-220ENST00000588917 CCDC141Q6ZP82 1450 aa29.87■■■□□ 2.37
CIRBP-220ENST00000588917 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
CIRBP-220ENST00000588917 MLH3Q9UHC1 1453 aa29.86■■■□□ 2.37
CIRBP-220ENST00000588917 ZMYM4Q5VZL5 1548 aa29.86■■■□□ 2.37
CIRBP-220ENST00000588917 KDM5CP41229 1560 aa29.85■■■□□ 2.37
CIRBP-220ENST00000588917 ARHGEF40Q8TER5 1519 aa29.84■■■□□ 2.37
CIRBP-220ENST00000588917 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
CIRBP-220ENST00000588917 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
CIRBP-220ENST00000588917 RTEL1-TNFRSF6BF6WH68 1400 aa29.81■■■□□ 2.36
CIRBP-220ENST00000588917 MADDQ8WXG6 1647 aa29.78■■■□□ 2.36
CIRBP-220ENST00000588917 ZFYVE16Q7Z3T8 1539 aa29.76■■■□□ 2.36
CIRBP-220ENST00000588917 ABCC5O15440 1437 aa29.76■■■□□ 2.35
CIRBP-220ENST00000588917 DAPK1P53355 1430 aa29.75■■■□□ 2.35
CIRBP-220ENST00000588917 YEATS2Q9ULM3 1422 aa29.75■■■□□ 2.35
CIRBP-220ENST00000588917 DNMT1P26358 1616 aaKnown RBP29.72■■■□□ 2.35
CIRBP-220ENST00000588917 ATP10AO60312 1499 aa29.72■■■□□ 2.35
CIRBP-220ENST00000588917 ATP7AQ04656 1500 aa29.71■■■□□ 2.35
CIRBP-220ENST00000588917 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
CIRBP-220ENST00000588917 SHANK2Q9UPX8 1470 aa29.7■■■□□ 2.35
CIRBP-220ENST00000588917 MAST1Q9Y2H9 1570 aa29.68■■■□□ 2.34
CIRBP-220ENST00000588917 KIDINS220Q9ULH0 1771 aa29.67■■■□□ 2.34
CIRBP-220ENST00000588917 INO80Q9ULG1 1556 aaPredicted RBP29.67■■■□□ 2.34
CIRBP-220ENST00000588917 ITGAEP38570 1179 aa29.66■■■□□ 2.34
CIRBP-220ENST00000588917 CHIC2Q9UKJ5 165 aa29.66■■■□□ 2.34
CIRBP-220ENST00000588917 ANKRD30AQ9BXX3 1397 aa29.64■■■□□ 2.34
CIRBP-220ENST00000588917 RIMS1Q86UR5 1692 aaKnown RBP29.64■■■□□ 2.34
CIRBP-220ENST00000588917 LMTK3Q96Q04 1460 aa29.64■■■□□ 2.34
CIRBP-220ENST00000588917 MLECQ14165 292 aa29.64■■■□□ 2.34
CIRBP-220ENST00000588917 DIP2CQ9Y2E4 1556 aa29.61■■■□□ 2.33
CIRBP-220ENST00000588917 PLPPR3Q6T4P5 718 aa29.61■■■□□ 2.33
CIRBP-220ENST00000588917 DHX29Q7Z478 1369 aaKnown RBP29.6■■■□□ 2.33
CIRBP-220ENST00000588917 CROCC2H7BZ55 1655 aa29.6■■■□□ 2.33
CIRBP-220ENST00000588917 RRP7BPQ9NSQ0 103 aa29.59■■■□□ 2.33
CIRBP-220ENST00000588917 ABCA6Q8N139 1617 aa29.59■■■□□ 2.33
CIRBP-220ENST00000588917 A2MP01023 1474 aa29.58■■■□□ 2.33
CIRBP-220ENST00000588917 SIGLEC1Q9BZZ2 1709 aa29.58■■■□□ 2.33
CIRBP-220ENST00000588917 REREQ9P2R6 1566 aa29.58■■■□□ 2.33
CIRBP-220ENST00000588917 NCOA1Q15788 1441 aa29.57■■■□□ 2.32
CIRBP-220ENST00000588917 ROCK1Q13464 1354 aa29.57■■■□□ 2.32
CIRBP-220ENST00000588917 ADGRL2O95490 1459 aa29.55■■■□□ 2.32
CIRBP-220ENST00000588917 PTPRKQ15262 1439 aa29.55■■■□□ 2.32
CIRBP-220ENST00000588917 FBXO41Q8TF61 875 aa29.55■■■□□ 2.32
CIRBP-220ENST00000588917 ADGBQ8N7X0 1667 aa29.55■■■□□ 2.32
CIRBP-220ENST00000588917 KIF15Q9NS87 1388 aa29.54■■■□□ 2.32
CIRBP-220ENST00000588917 PLXNC1O60486 1568 aa29.54■■■□□ 2.32
CIRBP-220ENST00000588917 HSPA2P54652 639 aa29.52■■■□□ 2.32
CIRBP-220ENST00000588917 AGLP35573 1532 aa29.51■■■□□ 2.32
CIRBP-220ENST00000588917 DUOX2Q9NRD8 1548 aa29.5■■■□□ 2.31
CIRBP-220ENST00000588917 KIF3BO15066 747 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms