RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
NLE1-205ENST00000588642 ITSN2Q9NZM3 1697 aa21.22■□□□□ 0.99
NLE1-205ENST00000588642 TCOF1Q13428 1488 aaKnown RBP21.22■□□□□ 0.99
NLE1-205ENST00000588642 ARHGAP5Q13017 1502 aa21.22■□□□□ 0.99
NLE1-205ENST00000588642 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
NLE1-205ENST00000588642 CAMSAP2Q08AD1 1489 aa21.18■□□□□ 0.98
NLE1-205ENST00000588642 PREX2Q70Z35 1606 aa21.18■□□□□ 0.98
NLE1-205ENST00000588642 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
NLE1-205ENST00000588642 GLI2P10070 1586 aa21.17■□□□□ 0.98
NLE1-205ENST00000588642 MYO5CQ9NQX4 1742 aa21.16■□□□□ 0.98
NLE1-205ENST00000588642 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
NLE1-205ENST00000588642 DIP2BQ9P265 1576 aa21.14■□□□□ 0.97
NLE1-205ENST00000588642 FANCAO15360 1455 aa21.13■□□□□ 0.97
NLE1-205ENST00000588642 CDC42BPBQ9Y5S2 1711 aa21.13■□□□□ 0.97
NLE1-205ENST00000588642 PLEKHH2Q8IVE3 1493 aa21.13■□□□□ 0.97
NLE1-205ENST00000588642 TRHP20396 242 aaPredicted RBP21.11■□□□□ 0.97
NLE1-205ENST00000588642 RSPH4AQ5TD94 716 aa21.11■□□□□ 0.97
NLE1-205ENST00000588642 CHIC2Q9UKJ5 165 aa21.11■□□□□ 0.97
NLE1-205ENST00000588642 ABCC5O15440 1437 aa21.1■□□□□ 0.97
NLE1-205ENST00000588642 KIAA1107Q9UPP5 1409 aa21.1■□□□□ 0.97
NLE1-205ENST00000588642 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
NLE1-205ENST00000588642 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
NLE1-205ENST00000588642 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
NLE1-205ENST00000588642 DAPK1P53355 1430 aa21.09■□□□□ 0.97
NLE1-205ENST00000588642 AKNAQ7Z591 1439 aa21.09■□□□□ 0.97
NLE1-205ENST00000588642 PTPRKQ15262 1439 aa21.08■□□□□ 0.97
NLE1-205ENST00000588642 MBD5Q9P267 1494 aa21.07■□□□□ 0.96
NLE1-205ENST00000588642 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
NLE1-205ENST00000588642 SCAPERQ9BY12 1400 aa21.05■□□□□ 0.96
NLE1-205ENST00000588642 SYCP2Q9BX26 1530 aa21.04■□□□□ 0.96
NLE1-205ENST00000588642 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
NLE1-205ENST00000588642 NEO1Q92859 1461 aa21.04■□□□□ 0.96
NLE1-205ENST00000588642 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
NLE1-205ENST00000588642 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
NLE1-205ENST00000588642 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.96
NLE1-205ENST00000588642 RRP7BPQ9NSQ0 103 aa21.02■□□□□ 0.96
NLE1-205ENST00000588642 ABCC1P33527 1531 aa21.02■□□□□ 0.96
NLE1-205ENST00000588642 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
NLE1-205ENST00000588642 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
NLE1-205ENST00000588642 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
NLE1-205ENST00000588642 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
NLE1-205ENST00000588642 CFAP74Q9C0B2 1584 aa21■□□□□ 0.95
NLE1-205ENST00000588642 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
NLE1-205ENST00000588642 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
NLE1-205ENST00000588642 MYT1LQ9UL68 1186 aa20.97■□□□□ 0.95
NLE1-205ENST00000588642 SPAG9O60271 1321 aaKnown RBP20.97■□□□□ 0.95
NLE1-205ENST00000588642 KIF13AQ9H1H9 1805 aa20.97■□□□□ 0.95
NLE1-205ENST00000588642 ANKRD30AQ9BXX3 1397 aa20.97■□□□□ 0.95
NLE1-205ENST00000588642 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
NLE1-205ENST00000588642 SHANK2Q9UPX8 1470 aa20.95■□□□□ 0.94
NLE1-205ENST00000588642 DENND4BO75064 1496 aaPredicted RBP20.94■□□□□ 0.94
NLE1-205ENST00000588642 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
NLE1-205ENST00000588642 TSPOAP1O95153 1857 aa20.93■□□□□ 0.94
NLE1-205ENST00000588642 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
NLE1-205ENST00000588642 HFM1A2PYH4 1435 aa20.92■□□□□ 0.94
NLE1-205ENST00000588642 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
NLE1-205ENST00000588642 NAIPQ13075 1403 aa20.91■□□□□ 0.94
NLE1-205ENST00000588642 POGZQ7Z3K3 1410 aa20.91■□□□□ 0.94
NLE1-205ENST00000588642 ZNF518AQ6AHZ1 1483 aa20.9■□□□□ 0.94
NLE1-205ENST00000588642 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
NLE1-205ENST00000588642 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.94
NLE1-205ENST00000588642 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
NLE1-205ENST00000588642 HRCP23327 699 aa20.88■□□□□ 0.93
NLE1-205ENST00000588642 CROCC2H7BZ55 1655 aa20.88■□□□□ 0.93
NLE1-205ENST00000588642 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
NLE1-205ENST00000588642 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
NLE1-205ENST00000588642 ADGBQ8N7X0 1667 aa20.82■□□□□ 0.92
NLE1-205ENST00000588642 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
NLE1-205ENST00000588642 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
NLE1-205ENST00000588642 ATP7AQ04656 1500 aa20.8■□□□□ 0.92
NLE1-205ENST00000588642 TRIM52Q96A61 297 aa20.8■□□□□ 0.92
NLE1-205ENST00000588642 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
NLE1-205ENST00000588642 KDM5CP41229 1560 aa20.8■□□□□ 0.92
NLE1-205ENST00000588642 ZFYVE16Q7Z3T8 1539 aa20.79■□□□□ 0.92
NLE1-205ENST00000588642 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
NLE1-205ENST00000588642 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
NLE1-205ENST00000588642 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
NLE1-205ENST00000588642 INO80Q9ULG1 1556 aaPredicted RBP20.76■□□□□ 0.91
NLE1-205ENST00000588642 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
NLE1-205ENST00000588642 GCC2Q8IWJ2 1684 aa20.75■□□□□ 0.91
NLE1-205ENST00000588642 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
NLE1-205ENST00000588642 RICTORQ6R327 1708 aa20.74■□□□□ 0.91
NLE1-205ENST00000588642 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
NLE1-205ENST00000588642 FRMPD1Q5SYB0 1578 aa20.73■□□□□ 0.91
NLE1-205ENST00000588642 KDM6BO15054 1643 aa20.73■□□□□ 0.91
NLE1-205ENST00000588642 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
NLE1-205ENST00000588642 KIDINS220Q9ULH0 1771 aa20.72■□□□□ 0.91
NLE1-205ENST00000588642 YEATS2Q9ULM3 1422 aa20.71■□□□□ 0.91
NLE1-205ENST00000588642 ZMYM4Q5VZL5 1548 aa20.71■□□□□ 0.91
NLE1-205ENST00000588642 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
NLE1-205ENST00000588642 A2MP01023 1474 aa20.7■□□□□ 0.9
NLE1-205ENST00000588642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.9
NLE1-205ENST00000588642 KIF3BO15066 747 aa20.69■□□□□ 0.9
NLE1-205ENST00000588642 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
NLE1-205ENST00000588642 NUP155O75694 1391 aa20.67■□□□□ 0.9
NLE1-205ENST00000588642 ATP10AO60312 1499 aa20.66■□□□□ 0.9
NLE1-205ENST00000588642 MPHOSPH9Q99550 1183 aa20.65■□□□□ 0.9
NLE1-205ENST00000588642 ABCA6Q8N139 1617 aa20.64■□□□□ 0.9
NLE1-205ENST00000588642 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
NLE1-205ENST00000588642 DIP2CQ9Y2E4 1556 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms