RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 POGZQ7Z3K3 1410 aa31.24■■■□□ 2.59
TPM4-208ENST00000588410 RICTORQ6R327 1708 aa31.21■■■□□ 2.59
TPM4-208ENST00000588410 MTUS2Q5JR59 1369 aa31.19■■■□□ 2.58
TPM4-208ENST00000588410 MAGI2Q86UL8 1455 aa31.19■■■□□ 2.58
TPM4-208ENST00000588410 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
TPM4-208ENST00000588410 ARHGEF40Q8TER5 1519 aa31.18■■■□□ 2.58
TPM4-208ENST00000588410 ZFYVE16Q7Z3T8 1539 aa31.16■■■□□ 2.58
TPM4-208ENST00000588410 YEATS2Q9ULM3 1422 aa31.15■■■□□ 2.58
TPM4-208ENST00000588410 MYT1LQ9UL68 1186 aa31.13■■■□□ 2.57
TPM4-208ENST00000588410 AFAP1Q8N556 730 aa31.12■■■□□ 2.57
TPM4-208ENST00000588410 ZNF518AQ6AHZ1 1483 aa31.12■■■□□ 2.57
TPM4-208ENST00000588410 ZNF777Q9ULD5 760 aaPredicted RBP31.11■■■□□ 2.57
TPM4-208ENST00000588410 PREX2Q70Z35 1606 aa31.09■■■□□ 2.57
TPM4-208ENST00000588410 CCNB3Q8WWL7 1395 aa31.08■■■□□ 2.57
TPM4-208ENST00000588410 CFDP1Q9UEE9 299 aaPredicted RBP31.06■■■□□ 2.56
TPM4-208ENST00000588410 GPATCH8Q9UKJ3 1502 aaKnown RBP31.05■■■□□ 2.56
TPM4-208ENST00000588410 CDC42BPBQ9Y5S2 1711 aa31.04■■■□□ 2.56
TPM4-208ENST00000588410 ATP10AO60312 1499 aa31.03■■■□□ 2.56
TPM4-208ENST00000588410 VPS8Q8N3P4 1428 aa31.02■■■□□ 2.56
TPM4-208ENST00000588410 ABCC1P33527 1531 aa31.01■■■□□ 2.55
TPM4-208ENST00000588410 EHBP1L1Q8N3D4 1523 aa31.01■■■□□ 2.55
TPM4-208ENST00000588410 TRAPPC8Q9Y2L5 1435 aa31■■■□□ 2.55
TPM4-208ENST00000588410 C9orf84Q5VXU9 1444 aa30.99■■■□□ 2.55
TPM4-208ENST00000588410 MLECQ14165 292 aa30.99■■■□□ 2.55
TPM4-208ENST00000588410 ADAMTSL3P82987 1691 aa30.99■■■□□ 2.55
TPM4-208ENST00000588410 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
TPM4-208ENST00000588410 KDM5CP41229 1560 aa30.98■■■□□ 2.55
TPM4-208ENST00000588410 BCORL1Q5H9F3 1711 aa30.98■■■□□ 2.55
TPM4-208ENST00000588410 PTPRMP28827 1452 aa30.97■■■□□ 2.55
TPM4-208ENST00000588410 CDC42BPAQ5VT25 1732 aa30.96■■■□□ 2.55
TPM4-208ENST00000588410 MLH3Q9UHC1 1453 aa30.95■■■□□ 2.54
TPM4-208ENST00000588410 HNRNPMP52272 730 aaKnown RBP eCLIP30.94■■■□□ 2.54
TPM4-208ENST00000588410 PLEKHH2Q8IVE3 1493 aa30.92■■■□□ 2.54
TPM4-208ENST00000588410 HECW2Q9P2P5 1572 aa30.92■■■□□ 2.54
TPM4-208ENST00000588410 MADDQ8WXG6 1647 aa30.91■■■□□ 2.54
TPM4-208ENST00000588410 SAMD9LQ8IVG5 1584 aa30.9■■■□□ 2.54
TPM4-208ENST00000588410 KIAA1107Q9UPP5 1409 aa30.9■■■□□ 2.54
TPM4-208ENST00000588410 ITSN2Q9NZM3 1697 aa30.88■■■□□ 2.53
TPM4-208ENST00000588410 SPAG9O60271 1321 aaKnown RBP30.88■■■□□ 2.53
TPM4-208ENST00000588410 SYCP2Q9BX26 1530 aa30.88■■■□□ 2.53
TPM4-208ENST00000588410 TIAM1Q13009 1591 aa30.87■■■□□ 2.53
TPM4-208ENST00000588410 PLPPR3Q6T4P5 718 aa30.85■■■□□ 2.53
TPM4-208ENST00000588410 NCOA2Q15596 1464 aa30.84■■■□□ 2.53
TPM4-208ENST00000588410 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
TPM4-208ENST00000588410 ZNF644Q9H582 1327 aaPredicted RBP30.83■■■□□ 2.53
TPM4-208ENST00000588410 SIGLEC1Q9BZZ2 1709 aa30.83■■■□□ 2.53
TPM4-208ENST00000588410 APLP2Q06481 763 aa30.81■■■□□ 2.52
TPM4-208ENST00000588410 LRRC9Q6ZRR7 1453 aa30.8■■■□□ 2.52
TPM4-208ENST00000588410 RIMS1Q86UR5 1692 aaKnown RBP30.78■■■□□ 2.52
TPM4-208ENST00000588410 ABCA6Q8N139 1617 aa30.78■■■□□ 2.52
TPM4-208ENST00000588410 SUPT6HQ7KZ85 1726 aaKnown RBP30.78■■■□□ 2.52
TPM4-208ENST00000588410 REREQ9P2R6 1566 aa30.77■■■□□ 2.52
TPM4-208ENST00000588410 MAP3K1Q13233 1512 aa30.76■■■□□ 2.51
TPM4-208ENST00000588410 KANK4Q5T7N3 995 aaPredicted RBP30.75■■■□□ 2.51
TPM4-208ENST00000588410 ESF1Q9H501 851 aaKnown RBP30.74■■■□□ 2.51
TPM4-208ENST00000588410 KIDINS220Q9ULH0 1771 aa30.71■■■□□ 2.51
TPM4-208ENST00000588410 AGLP35573 1532 aa30.71■■■□□ 2.51
TPM4-208ENST00000588410 ATP7AQ04656 1500 aa30.7■■■□□ 2.51
TPM4-208ENST00000588410 MBD5Q9P267 1494 aa30.7■■■□□ 2.5
TPM4-208ENST00000588410 RSPH4AQ5TD94 716 aa30.68■■■□□ 2.5
TPM4-208ENST00000588410 FER1L4A9Z1Z3 1794 aa30.66■■■□□ 2.5
TPM4-208ENST00000588410 CAMSAP2Q08AD1 1489 aa30.66■■■□□ 2.5
TPM4-208ENST00000588410 CEBPAP49715 358 aaPredicted RBP30.64■■■□□ 2.5
TPM4-208ENST00000588410 A2MP01023 1474 aa30.63■■■□□ 2.49
TPM4-208ENST00000588410 INO80Q9ULG1 1556 aaPredicted RBP30.62■■■□□ 2.49
TPM4-208ENST00000588410 RTEL1-TNFRSF6BF6WH68 1400 aa30.62■■■□□ 2.49
TPM4-208ENST00000588410 CCDC141Q6ZP82 1450 aa30.62■■■□□ 2.49
TPM4-208ENST00000588410 TSPY4P0CV99 314 aa30.59■■■□□ 2.49
TPM4-208ENST00000588410 TSPY10P0CW01 314 aa30.59■■■□□ 2.49
TPM4-208ENST00000588410 LMTK3Q96Q04 1460 aa30.58■■■□□ 2.49
TPM4-208ENST00000588410 MYOM3Q5VTT5 1437 aa30.56■■■□□ 2.48
TPM4-208ENST00000588410 CNTLNQ9NXG0 1405 aa30.56■■■□□ 2.48
TPM4-208ENST00000588410 MIA2Q96PC5 1412 aa30.55■■■□□ 2.48
TPM4-208ENST00000588410 GGT6Q6P531 493 aa30.54■■■□□ 2.48
TPM4-208ENST00000588410 HSPA2P54652 639 aa30.53■■■□□ 2.48
TPM4-208ENST00000588410 DHX29Q7Z478 1369 aaKnown RBP30.51■■■□□ 2.47
TPM4-208ENST00000588410 PLXNC1O60486 1568 aa30.5■■■□□ 2.47
TPM4-208ENST00000588410 ARHGEF5Q12774 1597 aa30.49■■■□□ 2.47
TPM4-208ENST00000588410 PPP6R1Q9UPN7 881 aa30.46■■■□□ 2.47
TPM4-208ENST00000588410 ADGBQ8N7X0 1667 aa30.46■■■□□ 2.47
TPM4-208ENST00000588410 ZMYM3Q14202 1370 aa30.43■■■□□ 2.46
TPM4-208ENST00000588410 KIF3BO15066 747 aa30.43■■■□□ 2.46
TPM4-208ENST00000588410 UHRF1BP1Q6BDS2 1440 aa30.43■■■□□ 2.46
TPM4-208ENST00000588410 C3P01024 1663 aa30.36■■■□□ 2.45
TPM4-208ENST00000588410 PREX1Q8TCU6 1659 aa30.34■■■□□ 2.45
TPM4-208ENST00000588410 FGD6Q6ZV73 1430 aa30.34■■■□□ 2.45
TPM4-208ENST00000588410 NPATQ14207 1427 aa30.33■■■□□ 2.45
TPM4-208ENST00000588410 MAST1Q9Y2H9 1570 aa30.32■■■□□ 2.44
TPM4-208ENST00000588410 MROH2AA6NES4 1674 aa30.3■■■□□ 2.44
TPM4-208ENST00000588410 PTPN23Q9H3S7 1636 aa30.29■■■□□ 2.44
TPM4-208ENST00000588410 WASHC2CQ9Y4E1 1318 aa30.29■■■□□ 2.44
TPM4-208ENST00000588410 CLTCQ00610 1675 aaKnown RBP30.28■■■□□ 2.44
TPM4-208ENST00000588410 ABCC5O15440 1437 aa30.28■■■□□ 2.44
TPM4-208ENST00000588410 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
TPM4-208ENST00000588410 TCOF1Q13428 1488 aaKnown RBP30.26■■■□□ 2.44
TPM4-208ENST00000588410 PTPRKQ15262 1439 aa30.24■■■□□ 2.43
TPM4-208ENST00000588410 DAPK1P53355 1430 aa30.23■■■□□ 2.43
TPM4-208ENST00000588410 FAM50AQ14320 339 aaKnown RBP30.23■■■□□ 2.43
TPM4-208ENST00000588410 RRP7BPQ9NSQ0 103 aa30.23■■■□□ 2.43
TPM4-208ENST00000588410 DMRT2Q9Y5R5 561 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms